RNA–Protein interactions for RNA: ENST00000441730.2

BRPF3-204, Transcript of bromodomain and PHD finger containing 3, humanhuman

TSL 5

Gene BRPF3, Length 3,329 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRPF3-204ENST00000441730 CYP2C8P10632 490 aa11.41□□□□□ -0.58
BRPF3-204ENST00000441730 UBXN2AP68543 259 aa11.41□□□□□ -0.58
BRPF3-204ENST00000441730 MIS18BP1Q6P0N0 1132 aa11.41□□□□□ -0.58
BRPF3-204ENST00000441730 NSMFQ6X4W1 530 aa11.41□□□□□ -0.58
BRPF3-204ENST00000441730 LCA5Q86VQ0 697 aa11.41□□□□□ -0.58
BRPF3-204ENST00000441730 SIAH1Q8IUQ4 282 aa11.41□□□□□ -0.58
BRPF3-204ENST00000441730 HPS3Q969F9 1004 aa11.41□□□□□ -0.58
BRPF3-204ENST00000441730 YIPF3Q9GZM5 350 aa11.41□□□□□ -0.58
BRPF3-204ENST00000441730 AS3MTQ9HBK9 375 aa11.41□□□□□ -0.58
BRPF3-204ENST00000441730 ITGB1BP2Q9UKP3 347 aa11.41□□□□□ -0.58
BRPF3-204ENST00000441730 A0A1B0GUL6 1792 aa11.41□□□□□ -0.58
BRPF3-204ENST00000441730 LSM1O15116 133 aaKnown RBP11.41□□□□□ -0.58
BRPF3-204ENST00000441730 MYCP01106 439 aaPredicted RBP11.41□□□□□ -0.58
BRPF3-204ENST00000441730 NAPAP54920 295 aa11.41□□□□□ -0.58
BRPF3-204ENST00000441730 INO80BQ9C086 356 aaPredicted RBP11.41□□□□□ -0.58
BRPF3-204ENST00000441730 RAVER2Q9HCJ3 691 aaKnown RBP11.41□□□□□ -0.58
BRPF3-204ENST00000441730 VPS18Q9P253 973 aa11.41□□□□□ -0.58
BRPF3-204ENST00000441730 PRELID1Q9Y255 219 aa11.41□□□□□ -0.58
BRPF3-204ENST00000441730 CCL15-CCL14A0A0B4J2E2 113 aa11.4□□□□□ -0.58
BRPF3-204ENST00000441730 PFKFB2O60825 505 aa11.4□□□□□ -0.58
BRPF3-204ENST00000441730 TOMM70O94826 608 aa11.4□□□□□ -0.58
BRPF3-204ENST00000441730 PCP11498 1178 aaKnown RBP11.4□□□□□ -0.58
BRPF3-204ENST00000441730 ST3GAL1Q11201 340 aa11.4□□□□□ -0.58
BRPF3-204ENST00000441730 CCL15Q16663 113 aa11.4□□□□□ -0.58
BRPF3-204ENST00000441730 CCDC50Q8IVM0 306 aa11.4□□□□□ -0.58
BRPF3-204ENST00000441730 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP11.4□□□□□ -0.58
BRPF3-204ENST00000441730 DDX55Q8NHQ9 600 aaKnown RBP eCLIP11.4□□□□□ -0.588e-6■■□□□ 11.7
BRPF3-204ENST00000441730 KLF15Q9UIH9 416 aa11.4□□□□□ -0.58
BRPF3-204ENST00000441730 SNCAIPQ9Y6H5 919 aa11.4□□□□□ -0.58
BRPF3-204ENST00000441730 CAPN7Q9Y6W3 813 aa11.4□□□□□ -0.58
BRPF3-204ENST00000441730 FAM169AQ9Y6X4 670 aa11.4□□□□□ -0.58
BRPF3-204ENST00000441730 CFBP00751 764 aa11.4□□□□□ -0.58
BRPF3-204ENST00000441730 ARPC4P59998 168 aa11.4□□□□□ -0.58
BRPF3-204ENST00000441730 CC2D1AQ6P1N0 951 aaPredicted RBP11.4□□□□□ -0.58
BRPF3-204ENST00000441730 SERBP1Q8NC51 408 aaKnown RBP eCLIP11.4□□□□□ -0.58
BRPF3-204ENST00000441730 SMC1BQ8NDV3 1235 aa11.4□□□□□ -0.58
BRPF3-204ENST00000441730 NSUN7Q8NE18 718 aaKnown RBP11.4□□□□□ -0.58
BRPF3-204ENST00000441730 MAGEC3Q8TD91 643 aa11.4□□□□□ -0.58
BRPF3-204ENST00000441730 ZNF274Q96GC6 653 aaPredicted RBP11.4□□□□□ -0.58
BRPF3-204ENST00000441730 SH2D4AQ9H788 454 aa11.4□□□□□ -0.58
BRPF3-204ENST00000441730 GABBR1Q9UBS5 961 aa11.4□□□□□ -0.58
BRPF3-204ENST00000441730 DDX20Q9UHI6 824 aaKnown RBP11.4□□□□□ -0.58
BRPF3-204ENST00000441730 TSKSQ9UJT2 592 aa11.4□□□□□ -0.58
BRPF3-204ENST00000441730 MYH7P12883 1935 aa11.4□□□□□ -0.58
BRPF3-204ENST00000441730 ZMYM6O95789 1325 aa11.4□□□□□ -0.58
BRPF3-204ENST00000441730 DLEC1Q9Y238 1755 aa11.4□□□□□ -0.58
BRPF3-204ENST00000441730 SYT1P21579 422 aa11.4□□□□□ -0.59
BRPF3-204ENST00000441730 PTPN14Q15678 1187 aa11.4□□□□□ -0.59
BRPF3-204ENST00000441730 TREML2Q5T2D2 321 aa11.4□□□□□ -0.59
BRPF3-204ENST00000441730 TRIM58Q8NG06 486 aa11.4□□□□□ -0.59
BRPF3-204ENST00000441730 RRP36Q96EU6 259 aaKnown RBP11.4□□□□□ -0.59
BRPF3-204ENST00000441730 ZIC5Q96T25 663 aa11.4□□□□□ -0.59
BRPF3-204ENST00000441730 TSC22D3Q99576 134 aa11.4□□□□□ -0.59
BRPF3-204ENST00000441730 VCPKMTQ9H867 229 aa11.4□□□□□ -0.59
BRPF3-204ENST00000441730 SLC39A2Q9NP94 309 aa11.4□□□□□ -0.59
BRPF3-204ENST00000441730 CORO1CQ9ULV4 474 aaPredicted RBP11.4□□□□□ -0.59
BRPF3-204ENST00000441730 SBF1O95248 1867 aa11.39□□□□□ -0.59
BRPF3-204ENST00000441730 ARAP2Q8WZ64 1704 aa11.39□□□□□ -0.59
BRPF3-204ENST00000441730 SASH3O75995 380 aa11.39□□□□□ -0.59
BRPF3-204ENST00000441730 STAT2P52630 851 aa11.39□□□□□ -0.59
BRPF3-204ENST00000441730 CSE1LP55060 971 aaKnown RBP11.39□□□□□ -0.59
BRPF3-204ENST00000441730 BACE1P56817 501 aa11.39□□□□□ -0.59
BRPF3-204ENST00000441730 BRAPQ7Z569 592 aa11.39□□□□□ -0.59
BRPF3-204ENST00000441730 ADGRF4Q8IZF3 695 aa11.39□□□□□ -0.59
BRPF3-204ENST00000441730 SREK1Q8WXA9 508 aaKnown RBP11.39□□□□□ -0.59
BRPF3-204ENST00000441730 ATG4CQ96DT6 458 aa11.39□□□□□ -0.59
BRPF3-204ENST00000441730 CCDC194A0A1B0GVG4 234 aa11.39□□□□□ -0.59
BRPF3-204ENST00000441730 FIBPO43427 364 aa11.39□□□□□ -0.59
BRPF3-204ENST00000441730 CTDNEP1O95476 244 aa11.39□□□□□ -0.59
BRPF3-204ENST00000441730 ITGBL1O95965 494 aaPredicted RBP11.39□□□□□ -0.59
BRPF3-204ENST00000441730 ABL1P00519 1130 aa11.39□□□□□ -0.59
BRPF3-204ENST00000441730 MCM3P25205 808 aa11.39□□□□□ -0.59
BRPF3-204ENST00000441730 HOXA13P31271 388 aaPredicted RBP11.39□□□□□ -0.59
BRPF3-204ENST00000441730 THOC7Q6I9Y2 204 aaKnown RBP11.39□□□□□ -0.59
BRPF3-204ENST00000441730 CEP57Q86XR8 500 aa11.39□□□□□ -0.59
BRPF3-204ENST00000441730 ERO1BQ86YB8 467 aa11.39□□□□□ -0.59
BRPF3-204ENST00000441730 GALNT15Q8N3T1 639 aa11.39□□□□□ -0.59
BRPF3-204ENST00000441730 TCHPQ9BT92 498 aa11.39□□□□□ -0.59
BRPF3-204ENST00000441730 TMCC3Q9ULS5 477 aa11.39□□□□□ -0.59
BRPF3-204ENST00000441730 EBAG9O00559 213 aa11.38□□□□□ -0.59
BRPF3-204ENST00000441730 SLC26A4O43511 780 aa11.38□□□□□ -0.59
BRPF3-204ENST00000441730 PARNO95453 639 aaKnown RBP11.38□□□□□ -0.59
BRPF3-204ENST00000441730 MAP7D1Q3KQU3 841 aa11.38□□□□□ -0.59
BRPF3-204ENST00000441730 EMC10Q5UCC4 262 aa11.38□□□□□ -0.59
BRPF3-204ENST00000441730 SGMS1Q86VZ5 419 aa11.38□□□□□ -0.59
BRPF3-204ENST00000441730 NYAP2Q9P242 653 aa11.38□□□□□ -0.59
BRPF3-204ENST00000441730 PCDHA1Q9Y5I3 950 aa11.38□□□□□ -0.59
BRPF3-204ENST00000441730 ARFGEF1Q9Y6D6 1849 aa11.38□□□□□ -0.59
BRPF3-204ENST00000441730 ATRNL1Q5VV63 1379 aa11.38□□□□□ -0.59
BRPF3-204ENST00000441730 KDM1AO60341 852 aa11.38□□□□□ -0.59
BRPF3-204ENST00000441730 SORBS3O60504 671 aa11.38□□□□□ -0.59
BRPF3-204ENST00000441730 AOC2O75106 756 aa11.38□□□□□ -0.59
BRPF3-204ENST00000441730 CALM1P0DP23 149 aa11.38□□□□□ -0.59
BRPF3-204ENST00000441730 CALM2P0DP24 149 aa11.38□□□□□ -0.59
BRPF3-204ENST00000441730 CALM3P0DP25 149 aa11.38□□□□□ -0.59
BRPF3-204ENST00000441730 SAFBQ15424 915 aaKnown RBP eCLIP11.38□□□□□ -0.59
BRPF3-204ENST00000441730 UBXN4Q92575 508 aa11.38□□□□□ -0.59
BRPF3-204ENST00000441730 WNK4Q96J92 1243 aa11.38□□□□□ -0.59
BRPF3-204ENST00000441730 TNMDQ9H2S6 317 aa11.38□□□□□ -0.59
BRPF3-204ENST00000441730 EMILIN3Q9NT22 766 aa11.38□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms