RNA–Protein interactions for RNA: ENST00000441703.5

HDAC6-210, Transcript of histone deacetylase 6, humanhuman

TSL 3

Gene HDAC6, Length 599 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-210ENST00000441703 PPM1JQ5JR12 505 aa7.42□□□□□ -1.22
HDAC6-210ENST00000441703 VARS2Q5ST30 1063 aaKnown RBP7.42□□□□□ -1.22
HDAC6-210ENST00000441703 CES5AQ6NT32 575 aa7.42□□□□□ -1.22
HDAC6-210ENST00000441703 ANKRD54Q6NXT1 300 aa7.42□□□□□ -1.22
HDAC6-210ENST00000441703 CTR9Q6PD62 1173 aa7.42□□□□□ -1.22
HDAC6-210ENST00000441703 ERC1Q8IUD2 1116 aa7.42□□□□□ -1.22
HDAC6-210ENST00000441703 STK11IPQ8N1F8 1099 aa7.42□□□□□ -1.22
HDAC6-210ENST00000441703 KLHL23Q8NBE8 558 aa7.42□□□□□ -1.22
HDAC6-210ENST00000441703 STAG1Q8WVM7 1258 aa7.42□□□□□ -1.22
HDAC6-210ENST00000441703 TIGD1Q96MW7 591 aa7.42□□□□□ -1.22
HDAC6-210ENST00000441703 NECTIN4Q96NY8 510 aa7.42□□□□□ -1.22
HDAC6-210ENST00000441703 CALCOCO1Q9P1Z2 691 aa7.42□□□□□ -1.22
HDAC6-210ENST00000441703 ANGPTL2Q9UKU9 493 aa7.42□□□□□ -1.22
HDAC6-210ENST00000441703 PLIN4Q96Q06 1357 aa7.42□□□□□ -1.22
HDAC6-210ENST00000441703 SPTBN2O15020 2390 aa7.41□□□□□ -1.22
HDAC6-210ENST00000441703 ZNF292O60281 2723 aa7.41□□□□□ -1.22
HDAC6-210ENST00000441703 MYO10Q9HD67 2058 aa7.41□□□□□ -1.22
HDAC6-210ENST00000441703 SYCE3A1L190 88 aa7.41□□□□□ -1.22
HDAC6-210ENST00000441703 PPFIA3O75145 1194 aa7.41□□□□□ -1.22
HDAC6-210ENST00000441703 LINC00271P0C7V0 271 aa7.41□□□□□ -1.22
HDAC6-210ENST00000441703 ZNF286BP0CG31 522 aa7.41□□□□□ -1.22
HDAC6-210ENST00000441703 CDK11BP21127 795 aaKnown RBP7.41□□□□□ -1.22
HDAC6-210ENST00000441703 SLC1A4P43007 532 aa7.41□□□□□ -1.22
HDAC6-210ENST00000441703 SNAP25P60880 206 aa7.41□□□□□ -1.22
HDAC6-210ENST00000441703 DUSP6Q16828 381 aa7.41□□□□□ -1.22
HDAC6-210ENST00000441703 TPRNQ4KMQ1 711 aa7.41□□□□□ -1.22
HDAC6-210ENST00000441703 LLGL2Q6P1M3 1020 aa7.41□□□□□ -1.22
HDAC6-210ENST00000441703 SIX5Q8N196 739 aa7.41□□□□□ -1.22
HDAC6-210ENST00000441703 PLCD3Q8N3E9 789 aa7.41□□□□□ -1.22
HDAC6-210ENST00000441703 KIAA1524Q8TCG1 905 aa7.41□□□□□ -1.22
HDAC6-210ENST00000441703 ATP8B4Q8TF62 1192 aa7.41□□□□□ -1.22
HDAC6-210ENST00000441703 ATP6V0A1Q93050 837 aa7.41□□□□□ -1.22
HDAC6-210ENST00000441703 MKL1Q969V6 931 aa7.41□□□□□ -1.22
HDAC6-210ENST00000441703 CHMP4CQ96CF2 233 aa7.41□□□□□ -1.22
HDAC6-210ENST00000441703 S1PR5Q9H228 398 aa7.41□□□□□ -1.22
HDAC6-210ENST00000441703 FOXD4L1Q9NU39 408 aa7.41□□□□□ -1.22
HDAC6-210ENST00000441703 RNF216Q9NWF9 866 aaPredicted RBP7.41□□□□□ -1.22
HDAC6-210ENST00000441703 FAM53CQ9NYF3 392 aa7.41□□□□□ -1.22
HDAC6-210ENST00000441703 CGNQ9P2M7 1197 aaKnown RBP7.41□□□□□ -1.22
HDAC6-210ENST00000441703 DDX41Q9UJV9 622 aaKnown RBP7.41□□□□□ -1.22
HDAC6-210ENST00000441703 ZDHHC9Q9Y397 364 aa7.41□□□□□ -1.22
HDAC6-210ENST00000441703 MRPL42Q9Y6G3 142 aaKnown RBP7.41□□□□□ -1.22
HDAC6-210ENST00000441703 KIAA1217Q5T5P2 1943 aa7.4□□□□□ -1.22
HDAC6-210ENST00000441703 USP24Q9UPU5 2620 aa7.4□□□□□ -1.22
HDAC6-210ENST00000441703 C17orf102A2RUQ5 167 aa7.4□□□□□ -1.22
HDAC6-210ENST00000441703 PLA2G6O60733 806 aa7.4□□□□□ -1.22
HDAC6-210ENST00000441703 CAND2O75155 1236 aa7.4□□□□□ -1.22
HDAC6-210ENST00000441703 ARIH2O95376 493 aa7.4□□□□□ -1.22
HDAC6-210ENST00000441703 TTLL1O95922 423 aa7.4□□□□□ -1.22
HDAC6-210ENST00000441703 SP9P0CG40 484 aa7.4□□□□□ -1.22
HDAC6-210ENST00000441703 NPR3P17342 541 aa7.4□□□□□ -1.22
HDAC6-210ENST00000441703 HOXB8P17481 243 aaPredicted RBP7.4□□□□□ -1.22
HDAC6-210ENST00000441703 MCM2P49736 904 aa7.4□□□□□ -1.22
HDAC6-210ENST00000441703 UBE3CQ15386 1083 aa7.4□□□□□ -1.22
HDAC6-210ENST00000441703 LY6KQ17RY6 165 aa7.4□□□□□ -1.22
HDAC6-210ENST00000441703 PAN2Q504Q3 1202 aaKnown RBP7.4□□□□□ -1.22
HDAC6-210ENST00000441703 SBK1Q52WX2 424 aa7.4□□□□□ -1.22
HDAC6-210ENST00000441703 SPOUT1Q5T280 376 aaKnown RBP7.4□□□□□ -1.22
HDAC6-210ENST00000441703 RNF207Q6ZRF8 634 aa7.4□□□□□ -1.22
HDAC6-210ENST00000441703 SEPT14Q6ZU15 432 aa7.4□□□□□ -1.22
HDAC6-210ENST00000441703 SERINC5Q86VE9 423 aa7.4□□□□□ -1.22
HDAC6-210ENST00000441703 CMTR2Q8IYT2 770 aaKnown RBP7.4□□□□□ -1.22
HDAC6-210ENST00000441703 ZDHHC14Q8IZN3 488 aa7.4□□□□□ -1.22
HDAC6-210ENST00000441703 ZNF444Q8N0Y2 327 aaPredicted RBP7.4□□□□□ -1.22
HDAC6-210ENST00000441703 VN1R2Q8NFZ6 395 aa7.4□□□□□ -1.22
HDAC6-210ENST00000441703 CEP95Q96GE4 821 aa7.4□□□□□ -1.22
HDAC6-210ENST00000441703 GMCL1Q96IK5 515 aa7.4□□□□□ -1.22
HDAC6-210ENST00000441703 ARID3AQ99856 593 aa7.4□□□□□ -1.22
HDAC6-210ENST00000441703 USP26Q9BXU7 913 aa7.4□□□□□ -1.22
HDAC6-210ENST00000441703 DDX24Q9GZR7 859 aaKnown RBP eCLIP7.4□□□□□ -1.222e-8■■■■□ 24.1
HDAC6-210ENST00000441703 POMKQ9H5K3 350 aa7.4□□□□□ -1.22
HDAC6-210ENST00000441703 ERVK-5Q9HDB9 667 aa7.4□□□□□ -1.22
HDAC6-210ENST00000441703 MTMR4Q9NYA4 1195 aa7.4□□□□□ -1.22
HDAC6-210ENST00000441703 LIMD1Q9UGP4 676 aa7.4□□□□□ -1.22
HDAC6-210ENST00000441703 SLC4A4Q9Y6R1 1079 aa7.4□□□□□ -1.22
HDAC6-210ENST00000441703 SPDYE4A6NLX3 237 aa7.39□□□□□ -1.23
HDAC6-210ENST00000441703 NFIBO00712 420 aa7.39□□□□□ -1.23
HDAC6-210ENST00000441703 RIOK3O14730 519 aaKnown RBP7.39□□□□□ -1.23
HDAC6-210ENST00000441703 F2P00734 622 aa7.39□□□□□ -1.23
HDAC6-210ENST00000441703 ICAM1P05362 532 aa7.39□□□□□ -1.23
HDAC6-210ENST00000441703 CHRM1P11229 460 aaPredicted RBP7.39□□□□□ -1.23
HDAC6-210ENST00000441703 U2AF2P26368 475 aaKnown RBP eCLIP7.39□□□□□ -1.23
HDAC6-210ENST00000441703 MTHFRP42898 656 aa7.39□□□□□ -1.23
HDAC6-210ENST00000441703 UBE3AQ05086 875 aa7.39□□□□□ -1.23
HDAC6-210ENST00000441703 ARHGAP1Q07960 439 aa7.39□□□□□ -1.23
HDAC6-210ENST00000441703 TBC1D8BQ0IIM8 1120 aa7.39□□□□□ -1.23
HDAC6-210ENST00000441703 TERF2Q15554 542 aa7.39□□□□□ -1.23
HDAC6-210ENST00000441703 SPECC1Q5M775 1068 aa7.39□□□□□ -1.23
HDAC6-210ENST00000441703 PLPP4Q5VZY2 271 aa7.39□□□□□ -1.23
HDAC6-210ENST00000441703 PDE12Q6L8Q7 609 aaKnown RBP7.39□□□□□ -1.23
HDAC6-210ENST00000441703 SYCE2Q6PIF2 218 aa7.39□□□□□ -1.23
HDAC6-210ENST00000441703 SLC30A10Q6XR72 485 aa7.39□□□□□ -1.23
HDAC6-210ENST00000441703 RUFY4Q6ZNE9 571 aa7.39□□□□□ -1.23
HDAC6-210ENST00000441703 TMEM57Q8N5G2 664 aa7.39□□□□□ -1.23
HDAC6-210ENST00000441703 SUMF1Q8NBK3 374 aa7.39□□□□□ -1.23
HDAC6-210ENST00000441703 DNERQ8NFT8 737 aa7.39□□□□□ -1.23
HDAC6-210ENST00000441703 CASP10Q92851 521 aa7.39□□□□□ -1.23
HDAC6-210ENST00000441703 ZNF689Q96CS4 500 aaPredicted RBP7.39□□□□□ -1.23
HDAC6-210ENST00000441703 C1orf115Q9H7X2 142 aa7.39□□□□□ -1.23
HDAC6-210ENST00000441703 RC3H2Q9HBD1 1191 aaKnown RBP7.39□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 54.6 ms