RNA–Protein interactions for RNA: ENST00000439958.7

CPSF7-205, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CPSF7, Length 3,524 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-205ENST00000439958 EYA4O95677 639 aa16.67■□□□□ 0.26
CPSF7-205ENST00000439958 GIT2Q14161 759 aa16.67■□□□□ 0.26
CPSF7-205ENST00000439958 NR1I3Q14994 352 aa16.67■□□□□ 0.26
CPSF7-205ENST00000439958 RINT1Q6NUQ1 792 aa16.67■□□□□ 0.26
CPSF7-205ENST00000439958 HSD17B14Q9BPX1 270 aa16.67■□□□□ 0.26
CPSF7-205ENST00000439958 TELO2Q9Y4R8 837 aa16.67■□□□□ 0.26
CPSF7-205ENST00000439958 SPDYE5A6NIY4 337 aa16.67■□□□□ 0.26
CPSF7-205ENST00000439958 KCNA1Q09470 495 aa16.67■□□□□ 0.26
CPSF7-205ENST00000439958 EPHA7Q15375 998 aa16.67■□□□□ 0.26
CPSF7-205ENST00000439958 GNPTABQ3T906 1256 aa16.67■□□□□ 0.26
CPSF7-205ENST00000439958 CYFIP1Q7L576 1253 aa16.67■□□□□ 0.26
CPSF7-205ENST00000439958 FAM178BQ8IXR5 827 aa16.67■□□□□ 0.26
CPSF7-205ENST00000439958 RDH13Q8NBN7 331 aa16.67■□□□□ 0.26
CPSF7-205ENST00000439958 ZC3H15Q8WU90 426 aaKnown RBP16.67■□□□□ 0.26
CPSF7-205ENST00000439958 L3MBTL3Q96JM7 780 aaPredicted RBP16.67■□□□□ 0.26
CPSF7-205ENST00000439958 BAG1Q99933 345 aaPredicted RBP16.67■□□□□ 0.26
CPSF7-205ENST00000439958 FAM207AQ9NSI2 230 aaPredicted RBP16.67■□□□□ 0.26
CPSF7-205ENST00000439958 SBF1O95248 1867 aa16.67■□□□□ 0.26
CPSF7-205ENST00000439958 CCZ1BP86790 482 aa16.67■□□□□ 0.26
CPSF7-205ENST00000439958 CCZ1P86791 482 aaPredicted RBP16.67■□□□□ 0.26
CPSF7-205ENST00000439958 PPP2R5CQ13362 524 aa16.67■□□□□ 0.26
CPSF7-205ENST00000439958 DCAF17Q5H9S7 520 aaPredicted RBP16.67■□□□□ 0.26
CPSF7-205ENST00000439958 PDZRN4Q6ZMN7 1036 aaPredicted RBP16.67■□□□□ 0.26
CPSF7-205ENST00000439958 FAM114A1Q8IWE2 563 aa16.67■□□□□ 0.26
CPSF7-205ENST00000439958 ZSWIM4Q9H7M6 989 aa16.67■□□□□ 0.26
CPSF7-205ENST00000439958 TXNRD2Q9NNW7 524 aa16.67■□□□□ 0.26
CPSF7-205ENST00000439958 NMRK2Q9NPI5 230 aa16.67■□□□□ 0.26
CPSF7-205ENST00000439958 GABBR1Q9UBS5 961 aa16.67■□□□□ 0.26
CPSF7-205ENST00000439958 COL4A3BPQ9Y5P4 624 aa16.67■□□□□ 0.26
CPSF7-205ENST00000439958 AKR1B15C9JRZ8 316 aaPredicted RBP16.66■□□□□ 0.26
CPSF7-205ENST00000439958 KLK7P49862 253 aa16.66■□□□□ 0.26
CPSF7-205ENST00000439958 TSR1Q2NL82 804 aaKnown RBP16.66■□□□□ 0.26
CPSF7-205ENST00000439958 FKBP15Q5T1M5 1219 aa16.66■□□□□ 0.26
CPSF7-205ENST00000439958 FAM102BQ5T8I3 360 aa16.66■□□□□ 0.26
CPSF7-205ENST00000439958 SWSAP1Q6NVH7 229 aa16.66■□□□□ 0.26
CPSF7-205ENST00000439958 PAXIP1Q6ZW49 1069 aaPredicted RBP16.66■□□□□ 0.26
CPSF7-205ENST00000439958 IRF2BP1Q8IU81 584 aa16.66■□□□□ 0.26
CPSF7-205ENST00000439958 ANKRD13CQ8N6S4 541 aa16.66■□□□□ 0.26
CPSF7-205ENST00000439958 RIT2Q99578 217 aa16.66■□□□□ 0.26
CPSF7-205ENST00000439958 POLR3CQ9BUI4 534 aaPredicted RBP16.66■□□□□ 0.26
CPSF7-205ENST00000439958 MOV10L1Q9BXT6 1211 aaKnown RBP16.66■□□□□ 0.26
CPSF7-205ENST00000439958 PNMA2Q9UL42 364 aa16.66■□□□□ 0.26
CPSF7-205ENST00000439958 QARSP47897 775 aaKnown RBP16.66■□□□□ 0.26
CPSF7-205ENST00000439958 KCTD2Q14681 263 aa16.66■□□□□ 0.26
CPSF7-205ENST00000439958 UGCGQ16739 394 aa16.66■□□□□ 0.26
CPSF7-205ENST00000439958 PADI6Q6TGC4 694 aa16.66■□□□□ 0.26
CPSF7-205ENST00000439958 GUF1Q8N442 669 aaKnown RBP16.66■□□□□ 0.26
CPSF7-205ENST00000439958 REPS2Q8NFH8 660 aa16.66■□□□□ 0.26
CPSF7-205ENST00000439958 GPRC5CQ9NQ84 441 aa16.66■□□□□ 0.26
CPSF7-205ENST00000439958 PCDHB13Q9Y5F0 798 aa16.66■□□□□ 0.26
CPSF7-205ENST00000439958 UBIAD1Q9Y5Z9 338 aa16.66■□□□□ 0.26
CPSF7-205ENST00000439958 P4HBP07237 508 aaKnown RBP16.66■□□□□ 0.26
CPSF7-205ENST00000439958 SYCP1Q15431 976 aa16.66■□□□□ 0.26
CPSF7-205ENST00000439958 CT47A1Q5JQC4 288 aaPredicted RBP16.66■□□□□ 0.26
CPSF7-205ENST00000439958 LBX2Q6XYB7 198 aa16.66■□□□□ 0.26
CPSF7-205ENST00000439958 VSIG10LQ86VR7 867 aa16.66■□□□□ 0.26
CPSF7-205ENST00000439958 CCDC155Q8N6L0 562 aa16.66■□□□□ 0.26
CPSF7-205ENST00000439958 TUFT1Q9NNX1 390 aa16.66■□□□□ 0.26
CPSF7-205ENST00000439958 TBC1D22BQ9NU19 505 aa16.66■□□□□ 0.26
CPSF7-205ENST00000439958 CCDC169A6NNP5 214 aa16.65■□□□□ 0.26
CPSF7-205ENST00000439958 CLSTN1O94985 981 aa16.65■□□□□ 0.26
CPSF7-205ENST00000439958 OSBPP22059 807 aa16.65■□□□□ 0.26
CPSF7-205ENST00000439958 NR2F2P24468 414 aa16.65■□□□□ 0.26
CPSF7-205ENST00000439958 ADAM9Q13443 819 aa16.65■□□□□ 0.26
CPSF7-205ENST00000439958 SNAPC2Q13487 334 aa16.65■□□□□ 0.26
CPSF7-205ENST00000439958 STXBP2Q15833 593 aa16.65■□□□□ 0.26
CPSF7-205ENST00000439958 Q3C1V9 767 aa16.65■□□□□ 0.26
CPSF7-205ENST00000439958 PARVGQ9HBI0 331 aa16.65■□□□□ 0.26
CPSF7-205ENST00000439958 WDR64B1ANS9 1081 aa16.65■□□□□ 0.26
CPSF7-205ENST00000439958 TNNT1P13805 278 aa16.65■□□□□ 0.26
CPSF7-205ENST00000439958 KRT9P35527 623 aa16.65■□□□□ 0.26
CPSF7-205ENST00000439958 SOX10P56693 466 aa16.65■□□□□ 0.26
CPSF7-205ENST00000439958 SCFD1Q8WVM8 642 aa16.65■□□□□ 0.26
CPSF7-205ENST00000439958 THAP9Q9H5L6 903 aa16.65■□□□□ 0.26
CPSF7-205ENST00000439958 SEPT9Q9UHD8 586 aaPredicted RBP16.65■□□□□ 0.26
CPSF7-205ENST00000439958 CCL15-CCL14A0A0B4J2E2 113 aa16.65■□□□□ 0.26
CPSF7-205ENST00000439958 CCNE2O96020 404 aa16.65■□□□□ 0.26
CPSF7-205ENST00000439958 YWHABP31946 246 aaKnown RBP16.65■□□□□ 0.26
CPSF7-205ENST00000439958 CCL15Q16663 113 aa16.65■□□□□ 0.26
CPSF7-205ENST00000439958 HYIQ5T013 277 aa16.65■□□□□ 0.26
CPSF7-205ENST00000439958 EFCC1Q9HA90 598 aa16.65■□□□□ 0.26
CPSF7-205ENST00000439958 A0A0G2JLL6 359 aaPredicted RBP16.64■□□□□ 0.25
CPSF7-205ENST00000439958 FAM170AA1A519 330 aa16.64■□□□□ 0.25
CPSF7-205ENST00000439958 KIF20AO95235 890 aa16.64■□□□□ 0.25
CPSF7-205ENST00000439958 FXR1P51114 621 aaKnown RBP eCLIP16.64■□□□□ 0.25
CPSF7-205ENST00000439958 CYP2J2P51589 502 aa16.64■□□□□ 0.25
CPSF7-205ENST00000439958 PRRT2Q7Z6L0 340 aaPredicted RBP16.64■□□□□ 0.25
CPSF7-205ENST00000439958 JPH1Q9HDC5 661 aaPredicted RBP16.64■□□□□ 0.25
CPSF7-205ENST00000439958 AGTPBP1Q9UPW5 1226 aa16.64■□□□□ 0.25
CPSF7-205ENST00000439958 STK24Q9Y6E0 443 aa16.64■□□□□ 0.25
CPSF7-205ENST00000439958 K7ENM7 598 aa16.64■□□□□ 0.25
CPSF7-205ENST00000439958 HIP1RO75146 1068 aa16.64■□□□□ 0.25
CPSF7-205ENST00000439958 FGFR1OPO95684 399 aaKnown RBP16.64■□□□□ 0.25
CPSF7-205ENST00000439958 EEF1GP26641 437 aaKnown RBP16.64■□□□□ 0.25
CPSF7-205ENST00000439958 OAZ1P54368 228 aa16.64■□□□□ 0.25
CPSF7-205ENST00000439958 MTF1Q14872 753 aa16.64■□□□□ 0.25
CPSF7-205ENST00000439958 CEP170P1Q96L14 293 aa16.64■□□□□ 0.25
CPSF7-205ENST00000439958 PSMD2Q13200 908 aa16.63■□□□□ 0.25
CPSF7-205ENST00000439958 FASTKD5Q7L8L6 764 aaKnown RBP16.63■□□□□ 0.25
CPSF7-205ENST00000439958 C2orf69Q8N8R5 385 aa16.63■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms