RNA–Protein interactions for RNA: ENST00000439886.5

SMPD4-209, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 2

Gene SMPD4, Length 3,371 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-209ENST00000439886 ZCWPW1Q9H0M4 648 aa12.73□□□□□ -0.37
SMPD4-209ENST00000439886 ISCUQ9H1K1 167 aa12.73□□□□□ -0.37
SMPD4-209ENST00000439886 PLCB1Q9NQ66 1216 aa12.73□□□□□ -0.37
SMPD4-209ENST00000439886 PANK4Q9NVE7 773 aa12.73□□□□□ -0.37
SMPD4-209ENST00000439886 RNF14Q9UBS8 474 aa12.73□□□□□ -0.37
SMPD4-209ENST00000439886 DBR1Q9UK59 544 aaKnown RBP12.73□□□□□ -0.37
SMPD4-209ENST00000439886 THRAP3Q9Y2W1 955 aaKnown RBP12.73□□□□□ -0.37
SMPD4-209ENST00000439886 MYH6P13533 1939 aa12.73□□□□□ -0.37
SMPD4-209ENST00000439886 KDM3BQ7LBC6 1761 aa12.72□□□□□ -0.37
SMPD4-209ENST00000439886 A8MUI8 341 aa12.72□□□□□ -0.37
SMPD4-209ENST00000439886 RTN2O75298 545 aa12.72□□□□□ -0.37
SMPD4-209ENST00000439886 CSF1RP07333 972 aa12.72□□□□□ -0.37
SMPD4-209ENST00000439886 MRPL12P52815 198 aaKnown RBP12.72□□□□□ -0.37
SMPD4-209ENST00000439886 KCNJ2P63252 427 aa12.72□□□□□ -0.37
SMPD4-209ENST00000439886 NPY5RQ15761 445 aa12.72□□□□□ -0.37
SMPD4-209ENST00000439886 UAP1Q16222 522 aaPredicted RBP12.72□□□□□ -0.37
SMPD4-209ENST00000439886 HERC4Q5GLZ8 1057 aaPredicted RBP12.72□□□□□ -0.37
SMPD4-209ENST00000439886 RNF10Q8N5U6 811 aaKnown RBP12.72□□□□□ -0.37
SMPD4-209ENST00000439886 AGAP11Q8TF27 550 aa12.72□□□□□ -0.37
SMPD4-209ENST00000439886 PPP1R12CQ9BZL4 782 aa12.72□□□□□ -0.37
SMPD4-209ENST00000439886 LRRC4CQ9HCJ2 640 aa12.72□□□□□ -0.37
SMPD4-209ENST00000439886 GRID2IPA4D2P6 1211 aa12.72□□□□□ -0.37
SMPD4-209ENST00000439886 SMCO2A6NFE2 343 aa12.72□□□□□ -0.37
SMPD4-209ENST00000439886 TSPY3P0CV98 308 aa12.72□□□□□ -0.37
SMPD4-209ENST00000439886 TSPY8P0CW00 308 aa12.72□□□□□ -0.37
SMPD4-209ENST00000439886 HSPA9P38646 679 aaKnown RBP12.72□□□□□ -0.37
SMPD4-209ENST00000439886 SESN3P58005 492 aa12.72□□□□□ -0.37
SMPD4-209ENST00000439886 LACTBP83111 547 aaPredicted RBP12.72□□□□□ -0.37
SMPD4-209ENST00000439886 TAF11Q15544 211 aa12.72□□□□□ -0.37
SMPD4-209ENST00000439886 SLC5A9Q2M3M2 681 aa12.72□□□□□ -0.37
SMPD4-209ENST00000439886 GIGYF2Q6Y7W6 1299 aaKnown RBP12.72□□□□□ -0.37
SMPD4-209ENST00000439886 ZNF444Q8N0Y2 327 aaPredicted RBP12.72□□□□□ -0.37
SMPD4-209ENST00000439886 SLC17A8Q8NDX2 589 aa12.72□□□□□ -0.37
SMPD4-209ENST00000439886 GLG1Q92896 1179 aa12.72□□□□□ -0.37
SMPD4-209ENST00000439886 NSRP1Q9H0G5 558 aaKnown RBP12.72□□□□□ -0.37
SMPD4-209ENST00000439886 ATP6V0A4Q9HBG4 840 aa12.72□□□□□ -0.37
SMPD4-209ENST00000439886 ABCF3Q9NUQ8 709 aa12.72□□□□□ -0.37
SMPD4-209ENST00000439886 KBTBD4Q9NVX7 518 aa12.72□□□□□ -0.37
SMPD4-209ENST00000439886 TFCP2L1Q9NZI6 479 aa12.72□□□□□ -0.37
SMPD4-209ENST00000439886 NOP53Q9NZM5 478 aaKnown RBP12.72□□□□□ -0.37
SMPD4-209ENST00000439886 SAP30BPQ9UHR5 308 aaKnown RBP12.72□□□□□ -0.37
SMPD4-209ENST00000439886 PTPN22Q9Y2R2 807 aa12.72□□□□□ -0.37
SMPD4-209ENST00000439886 PCDHGA4Q9Y5G9 962 aa12.72□□□□□ -0.37
SMPD4-209ENST00000439886 MYMKA6NI61 221 aa12.72□□□□□ -0.37
SMPD4-209ENST00000439886 FUT2Q10981 343 aa12.72□□□□□ -0.37
SMPD4-209ENST00000439886 TMEM266Q2M3C6 531 aa12.72□□□□□ -0.37
SMPD4-209ENST00000439886 SPATA21Q7Z572 469 aa12.72□□□□□ -0.37
SMPD4-209ENST00000439886 HOOK3Q86VS8 718 aa12.72□□□□□ -0.37
SMPD4-209ENST00000439886 NCAPG2Q86XI2 1143 aa12.72□□□□□ -0.37
SMPD4-209ENST00000439886 MYOCDQ8IZQ8 938 aa12.72□□□□□ -0.37
SMPD4-209ENST00000439886 SPICE1Q8N0Z3 855 aa12.72□□□□□ -0.37
SMPD4-209ENST00000439886 LRRC15Q8TF66 581 aa12.72□□□□□ -0.37
SMPD4-209ENST00000439886 ECT2Q9H8V3 914 aa12.72□□□□□ -0.37
SMPD4-209ENST00000439886 SEC63Q9UGP8 760 aaKnown RBP12.72□□□□□ -0.37
SMPD4-209ENST00000439886 SIK3Q9Y2K2 1263 aa12.72□□□□□ -0.37
SMPD4-209ENST00000439886 USP17L8P0C7I0 530 aa12.71□□□□□ -0.37
SMPD4-209ENST00000439886 ATF3P18847 181 aa12.71□□□□□ -0.37
SMPD4-209ENST00000439886 IFI35P80217 286 aaPredicted RBP12.71□□□□□ -0.37
SMPD4-209ENST00000439886 ITIH3Q06033 890 aa12.71□□□□□ -0.37
SMPD4-209ENST00000439886 CUL1Q13616 776 aa12.71□□□□□ -0.37
SMPD4-209ENST00000439886 NONOQ15233 471 aaKnown RBP eCLIP12.71□□□□□ -0.37
SMPD4-209ENST00000439886 NAB2Q15742 525 aa12.71□□□□□ -0.37
SMPD4-209ENST00000439886 CAVIN4Q5BKX8 364 aa12.71□□□□□ -0.37
SMPD4-209ENST00000439886 KRT79Q5XKE5 535 aa12.71□□□□□ -0.37
SMPD4-209ENST00000439886 NUGGCQ68CJ6 796 aa12.71□□□□□ -0.37
SMPD4-209ENST00000439886 C6orf89Q6UWU4 347 aa12.71□□□□□ -0.37
SMPD4-209ENST00000439886 METTL13Q8N6R0 699 aa12.71□□□□□ -0.37
SMPD4-209ENST00000439886 ANKS1AQ92625 1134 aa12.71□□□□□ -0.37
SMPD4-209ENST00000439886 ATP6V0A2Q9Y487 856 aa12.71□□□□□ -0.37
SMPD4-209ENST00000439886 IGF2BP3O00425 579 aaKnown RBP eCLIP12.71□□□□□ -0.38
SMPD4-209ENST00000439886 DDAH1O94760 285 aa12.71□□□□□ -0.38
SMPD4-209ENST00000439886 UBOX5O94941 541 aa12.71□□□□□ -0.38
SMPD4-209ENST00000439886 SHBGP04278 402 aa12.71□□□□□ -0.38
SMPD4-209ENST00000439886 ALKBH5Q6P6C2 394 aaKnown RBP12.71□□□□□ -0.38
SMPD4-209ENST00000439886 TNFRSF25Q93038 417 aa12.71□□□□□ -0.38
SMPD4-209ENST00000439886 MRRFQ96E11 262 aaKnown RBP12.71□□□□□ -0.38
SMPD4-209ENST00000439886 TMEM260Q9NX78 707 aa12.71□□□□□ -0.38
SMPD4-209ENST00000439886 PCDHA6Q9UN73 950 aa12.71□□□□□ -0.38
SMPD4-209ENST00000439886 PCDHA8Q9Y5H6 950 aa12.71□□□□□ -0.38
SMPD4-209ENST00000439886 NWD2Q9ULI1 1742 aa12.71□□□□□ -0.38
SMPD4-209ENST00000439886 N4BP2Q86UW6 1770 aaPredicted RBP12.71□□□□□ -0.38
SMPD4-209ENST00000439886 A0A1W2PQJ5 194 aa12.7□□□□□ -0.38
SMPD4-209ENST00000439886 SCNN1BP51168 640 aa12.7□□□□□ -0.38
SMPD4-209ENST00000439886 ATP11AP98196 1134 aa12.7□□□□□ -0.38
SMPD4-209ENST00000439886 IFI16Q16666 785 aaKnown RBP12.7□□□□□ -0.38
SMPD4-209ENST00000439886 LRRC23Q53EV4 343 aaPredicted RBP12.7□□□□□ -0.38
SMPD4-209ENST00000439886 WLSQ5T9L3 541 aa12.7□□□□□ -0.38
SMPD4-209ENST00000439886 VPS36Q86VN1 386 aa12.7□□□□□ -0.38
SMPD4-209ENST00000439886 TBCKQ8TEA7 893 aa12.7□□□□□ -0.38
SMPD4-209ENST00000439886 LARP4BQ92615 738 aaKnown RBP12.7□□□□□ -0.38
SMPD4-209ENST00000439886 DDX12PQ92771 950 aa12.7□□□□□ -0.38
SMPD4-209ENST00000439886 TRIM33Q9UPN9 1127 aa12.7□□□□□ -0.38
SMPD4-209ENST00000439886 TRPC6Q9Y210 931 aa12.7□□□□□ -0.38
SMPD4-209ENST00000439886 COL4A3BPQ9Y5P4 624 aa12.7□□□□□ -0.38
SMPD4-209ENST00000439886 MROH5Q6ZUA9 1318 aa12.7□□□□□ -0.38
SMPD4-209ENST00000439886 SMIM24O75264 130 aa12.7□□□□□ -0.38
SMPD4-209ENST00000439886 FGFR4P22455 802 aa12.7□□□□□ -0.38
SMPD4-209ENST00000439886 CA8P35219 290 aa12.7□□□□□ -0.38
SMPD4-209ENST00000439886 UBE4AQ14139 1066 aa12.7□□□□□ -0.38
SMPD4-209ENST00000439886 MEI1Q5TIA1 1274 aa12.7□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms