RNA–Protein interactions for RNA: ENST00000439724.7

SMAD3-202, Transcript of SMAD family member 3, humanhuman

TSL 1 (best) BASIC

Gene SMAD3, Length 1,530 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-202ENST00000439724 DHX15O43143 795 aaKnown RBP13.03□□□□□ -0.32
SMAD3-202ENST00000439724 ERVK-24P63145 666 aa13.03□□□□□ -0.32
SMAD3-202ENST00000439724 MRPS9P82933 396 aaKnown RBP13.03□□□□□ -0.32
SMAD3-202ENST00000439724 RAD51AP2Q09MP3 1159 aa13.03□□□□□ -0.32
SMAD3-202ENST00000439724 COG2Q14746 738 aa13.03□□□□□ -0.32
SMAD3-202ENST00000439724 SYT10Q6XYQ8 523 aa13.03□□□□□ -0.32
SMAD3-202ENST00000439724 C1orf186Q6ZWK4 172 aa13.03□□□□□ -0.32
SMAD3-202ENST00000439724 WNK4Q96J92 1243 aa13.03□□□□□ -0.32
SMAD3-202ENST00000439724 ZFP91Q96JP5 570 aaPredicted RBP13.03□□□□□ -0.32
SMAD3-202ENST00000439724 ZHX3Q9H4I2 956 aa13.03□□□□□ -0.32
SMAD3-202ENST00000439724 PXMP2Q9NR77 195 aa13.03□□□□□ -0.32
SMAD3-202ENST00000439724 TMOD4Q9NZQ9 345 aa13.03□□□□□ -0.32
SMAD3-202ENST00000439724 ZNF214Q9UL59 606 aaPredicted RBP13.03□□□□□ -0.32
SMAD3-202ENST00000439724 FZD1Q9UP38 647 aa13.03□□□□□ -0.32
SMAD3-202ENST00000439724 TRAF3IP3Q9Y228 551 aa13.03□□□□□ -0.32
SMAD3-202ENST00000439724 AFG3L2Q9Y4W6 797 aa13.03□□□□□ -0.32
SMAD3-202ENST00000439724 RASSF10A6NK89 507 aa13.03□□□□□ -0.32
SMAD3-202ENST00000439724 NKRFO15226 690 aaKnown RBP eCLIP13.03□□□□□ -0.32
SMAD3-202ENST00000439724 USP2O75604 605 aaPredicted RBP13.03□□□□□ -0.32
SMAD3-202ENST00000439724 DDNO94850 711 aaPredicted RBP13.03□□□□□ -0.32
SMAD3-202ENST00000439724 TRIM21P19474 475 aaKnown RBP13.03□□□□□ -0.32
SMAD3-202ENST00000439724 MEA1Q16626 185 aa13.03□□□□□ -0.32
SMAD3-202ENST00000439724 CATSPERGQ6ZRH7 1159 aa13.03□□□□□ -0.32
SMAD3-202ENST00000439724 MIER3Q7Z3K6 550 aa13.03□□□□□ -0.32
SMAD3-202ENST00000439724 NELFCDQ8IXH7 590 aa13.03□□□□□ -0.32
SMAD3-202ENST00000439724 RBM46Q8TBY0 533 aaKnown RBP13.03□□□□□ -0.32
SMAD3-202ENST00000439724 PIGOQ8TEQ8 1089 aa13.03□□□□□ -0.32
SMAD3-202ENST00000439724 PDCD2LQ9BRP1 358 aa13.03□□□□□ -0.32
SMAD3-202ENST00000439724 LXNQ9BS40 222 aa13.03□□□□□ -0.32
SMAD3-202ENST00000439724 DESI2Q9BSY9 194 aa13.03□□□□□ -0.32
SMAD3-202ENST00000439724 TBC1D22BQ9NU19 505 aa13.03□□□□□ -0.32
SMAD3-202ENST00000439724 SEL1LQ9UBV2 794 aa13.03□□□□□ -0.32
SMAD3-202ENST00000439724 ODF2LQ9ULJ1 636 aa13.03□□□□□ -0.32
SMAD3-202ENST00000439724 SIK3Q9Y2K2 1263 aa13.03□□□□□ -0.32
SMAD3-202ENST00000439724 A0A0G2JMZ2 1700 aa13.02□□□□□ -0.33
SMAD3-202ENST00000439724 RSPH10B2B2RC85 870 aa13.02□□□□□ -0.33
SMAD3-202ENST00000439724 PDXKO00764 312 aa13.02□□□□□ -0.33
SMAD3-202ENST00000439724 EIF3DO15371 548 aaKnown RBP eCLIP13.02□□□□□ -0.33
SMAD3-202ENST00000439724 FAM13AO94988 1023 aa13.02□□□□□ -0.33
SMAD3-202ENST00000439724 RSPH10BP0C881 870 aa13.02□□□□□ -0.33
SMAD3-202ENST00000439724 EIF2AK2P19525 551 aaKnown RBP13.02□□□□□ -0.33
SMAD3-202ENST00000439724 CASP5P51878 434 aa13.02□□□□□ -0.33
SMAD3-202ENST00000439724 ZNF131P52739 623 aa13.02□□□□□ -0.33
SMAD3-202ENST00000439724 ZBED6P86452 979 aa13.02□□□□□ -0.33
SMAD3-202ENST00000439724 ITGB3BPQ13352 177 aaPredicted RBP13.02□□□□□ -0.33
SMAD3-202ENST00000439724 MTMR1Q13613 665 aa13.02□□□□□ -0.33
SMAD3-202ENST00000439724 KNOP1Q1ED39 458 aaKnown RBP13.02□□□□□ -0.33
SMAD3-202ENST00000439724 CCDC40Q4G0X9 1142 aa13.02□□□□□ -0.33
SMAD3-202ENST00000439724 SNRNP48Q6IEG0 339 aaKnown RBP13.02□□□□□ -0.33
SMAD3-202ENST00000439724 NSMFQ6X4W1 530 aa13.02□□□□□ -0.33
SMAD3-202ENST00000439724 RMDN3Q96TC7 470 aa13.02□□□□□ -0.33
SMAD3-202ENST00000439724 MRPL44Q9H9J2 332 aaKnown RBP13.02□□□□□ -0.33
SMAD3-202ENST00000439724 L2HGDHQ9H9P8 463 aa13.02□□□□□ -0.33
SMAD3-202ENST00000439724 WRAP73Q9P2S5 460 aaPredicted RBP13.02□□□□□ -0.33
SMAD3-202ENST00000439724 RIPK3Q9Y572 518 aa13.02□□□□□ -0.33
SMAD3-202ENST00000439724 SNCAIPQ9Y6H5 919 aa13.02□□□□□ -0.33
SMAD3-202ENST00000439724 UBE4BO95155 1302 aa13.02□□□□□ -0.33
SMAD3-202ENST00000439724 LYPLA2O95372 231 aa13.01□□□□□ -0.33
SMAD3-202ENST00000439724 P4HBP07237 508 aaKnown RBP13.01□□□□□ -0.33
SMAD3-202ENST00000439724 GUCY2CP25092 1073 aa13.01□□□□□ -0.33
SMAD3-202ENST00000439724 HOXD13P35453 343 aa13.01□□□□□ -0.33
SMAD3-202ENST00000439724 KLK7P49862 253 aa13.01□□□□□ -0.33
SMAD3-202ENST00000439724 MAP3K9P80192 1104 aa13.01□□□□□ -0.33
SMAD3-202ENST00000439724 TSR1Q2NL82 804 aaKnown RBP13.01□□□□□ -0.33
SMAD3-202ENST00000439724 ARHGEF16Q5VV41 709 aa13.01□□□□□ -0.33
SMAD3-202ENST00000439724 PPP1R3FQ6ZSY5 799 aaPredicted RBP13.01□□□□□ -0.33
SMAD3-202ENST00000439724 TRIM59Q8IWR1 403 aa13.01□□□□□ -0.33
SMAD3-202ENST00000439724 DCPSQ96C86 337 aaKnown RBP13.01□□□□□ -0.33
SMAD3-202ENST00000439724 TEX13BQ9BXU2 312 aa13.01□□□□□ -0.33
SMAD3-202ENST00000439724 TYW1Q9NV66 732 aaKnown RBP13.01□□□□□ -0.33
SMAD3-202ENST00000439724 RNF181Q9P0P0 153 aa13.01□□□□□ -0.33
SMAD3-202ENST00000439724 DNAI1Q9UI46 699 aa13.01□□□□□ -0.33
SMAD3-202ENST00000439724 MYH11P35749 1972 aa13□□□□□ -0.33
SMAD3-202ENST00000439724 SPDYE16A6NNV3 312 aaPredicted RBP13□□□□□ -0.33
SMAD3-202ENST00000439724 DDX39AO00148 427 aaKnown RBP13□□□□□ -0.33
SMAD3-202ENST00000439724 CETN3O15182 167 aa13□□□□□ -0.33
SMAD3-202ENST00000439724 CALUO43852 315 aaPredicted RBP13□□□□□ -0.33
SMAD3-202ENST00000439724 MYBP10242 640 aa13□□□□□ -0.33
SMAD3-202ENST00000439724 CCND2P30279 289 aa13□□□□□ -0.33
SMAD3-202ENST00000439724 CDK17Q00537 523 aa13□□□□□ -0.33
SMAD3-202ENST00000439724 BAATQ14032 418 aaPredicted RBP13□□□□□ -0.33
SMAD3-202ENST00000439724 VGLL4Q14135 290 aa13□□□□□ -0.33
SMAD3-202ENST00000439724 TMEM132BQ14DG7 1078 aa13□□□□□ -0.33
SMAD3-202ENST00000439724 WDR59Q6PJI9 974 aa13□□□□□ -0.33
SMAD3-202ENST00000439724 BANK1Q8NDB2 785 aa13□□□□□ -0.33
SMAD3-202ENST00000439724 ZNF397Q8NF99 534 aaPredicted RBP13□□□□□ -0.33
SMAD3-202ENST00000439724 GPRASP2Q96D09 838 aa13□□□□□ -0.33
SMAD3-202ENST00000439724 PCMTD1Q96MG8 357 aaPredicted RBP13□□□□□ -0.33
SMAD3-202ENST00000439724 EDEM3Q9BZQ6 932 aa13□□□□□ -0.33
SMAD3-202ENST00000439724 ZSWIM4Q9H7M6 989 aa13□□□□□ -0.33
SMAD3-202ENST00000439724 PARVGQ9HBI0 331 aa13□□□□□ -0.33
SMAD3-202ENST00000439724 AGPAT5Q9NUQ2 364 aa13□□□□□ -0.33
SMAD3-202ENST00000439724 HOXC10Q9NYD6 342 aa13□□□□□ -0.33
SMAD3-202ENST00000439724 PKD2L1Q9P0L9 805 aa13□□□□□ -0.33
SMAD3-202ENST00000439724 ZBTB4Q9P1Z0 1013 aaPredicted RBP13□□□□□ -0.33
SMAD3-202ENST00000439724 DBR1Q9UK59 544 aaKnown RBP13□□□□□ -0.33
SMAD3-202ENST00000439724 FAM184BQ9ULE4 1060 aa13□□□□□ -0.33
SMAD3-202ENST00000439724 ARHGEF35A5YM69 484 aa12.99□□□□□ -0.33
SMAD3-202ENST00000439724 ZBTB39O15060 712 aa12.99□□□□□ -0.33
SMAD3-202ENST00000439724 PRPF6O94906 941 aaKnown RBP12.99□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms