RNA–Protein interactions for RNA: ENST00000439117.6

TSC2-206, Transcript of TSC complex subunit 2, humanhuman

TSL 1 (best)

Gene TSC2, Length 5,073 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSC2-206ENST00000439117 ARHGAP10A1A4S6 786 aa16.18■□□□□ 0.18
TSC2-206ENST00000439117 GPC4O75487 556 aa16.18■□□□□ 0.18
TSC2-206ENST00000439117 MOCS3O95396 460 aa16.18■□□□□ 0.18
TSC2-206ENST00000439117 PRDX5P30044 214 aa16.18■□□□□ 0.18
TSC2-206ENST00000439117 ADAM9Q13443 819 aa16.18■□□□□ 0.18
TSC2-206ENST00000439117 XKR9Q5GH70 373 aa16.18■□□□□ 0.18
TSC2-206ENST00000439117 ZNF658Q5TYW1 1059 aaPredicted RBP16.18■□□□□ 0.18
TSC2-206ENST00000439117 PIP4K2CQ8TBX8 421 aa16.18■□□□□ 0.18
TSC2-206ENST00000439117 P2RX5Q93086 422 aa16.18■□□□□ 0.18
TSC2-206ENST00000439117 SPC25Q9HBM1 224 aa16.18■□□□□ 0.18
TSC2-206ENST00000439117 PLEKHG2Q9H7P9 1386 aa16.18■□□□□ 0.18
TSC2-206ENST00000439117 PIK3C2BO00750 1634 aa16.18■□□□□ 0.18
TSC2-206ENST00000439117 CCDC138Q96M89 665 aa16.18■□□□□ 0.18
TSC2-206ENST00000439117 SERPINI1Q99574 410 aa16.18■□□□□ 0.18
TSC2-206ENST00000439117 BPIFA3Q9BQP9 254 aa16.18■□□□□ 0.18
TSC2-206ENST00000439117 SPATA31A6Q5VVP1 1343 aa16.18■□□□□ 0.18
TSC2-206ENST00000439117 HOXA7P31268 230 aaPredicted RBP16.18■□□□□ 0.18
TSC2-206ENST00000439117 KCNJ6P48051 423 aa16.18■□□□□ 0.18
TSC2-206ENST00000439117 PPP2R5DQ14738 602 aa16.18■□□□□ 0.18
TSC2-206ENST00000439117 TAF12Q16514 161 aa16.18■□□□□ 0.18
TSC2-206ENST00000439117 GRAMD1BQ3KR37 738 aa16.18■□□□□ 0.18
TSC2-206ENST00000439117 PODNQ7Z5L7 613 aa16.18■□□□□ 0.18
TSC2-206ENST00000439117 VIPAS39Q9H9C1 493 aa16.18■□□□□ 0.18
TSC2-206ENST00000439117 EEF1DP29692 281 aaKnown RBP16.17■□□□□ 0.18
TSC2-206ENST00000439117 SLC16A2P36021 539 aa16.17■□□□□ 0.18
TSC2-206ENST00000439117 SLCO1A2P46721 670 aa16.17■□□□□ 0.18
TSC2-206ENST00000439117 FGD4Q96M96 766 aa16.17■□□□□ 0.18
TSC2-206ENST00000439117 PIGSQ96S52 555 aa16.17■□□□□ 0.18
TSC2-206ENST00000439117 PCYT1AP49585 367 aa16.17■□□□□ 0.18
TSC2-206ENST00000439117 GNL3Q9BVP2 549 aaKnown RBP eCLIP16.17■□□□□ 0.18
TSC2-206ENST00000439117 GEMIN8Q9NWZ8 242 aaKnown RBP16.17■□□□□ 0.18
TSC2-206ENST00000439117 BAG5Q9UL15 447 aa16.17■□□□□ 0.18
TSC2-206ENST00000439117 A0A087WWV3 80 aa16.17■□□□□ 0.18
TSC2-206ENST00000439117 M0QZ92 97 aa16.17■□□□□ 0.18
TSC2-206ENST00000439117 GARSP41250 739 aaKnown RBP16.17■□□□□ 0.18
TSC2-206ENST00000439117 KIF23Q02241 960 aaPredicted RBP16.17■□□□□ 0.18
TSC2-206ENST00000439117 TMED2Q15363 201 aa16.17■□□□□ 0.18
TSC2-206ENST00000439117 FAM102BQ5T8I3 360 aa16.17■□□□□ 0.18
TSC2-206ENST00000439117 USP17L2Q6R6M4 530 aa16.17■□□□□ 0.18
TSC2-206ENST00000439117 DGKHQ86XP1 1220 aa16.17■□□□□ 0.18
TSC2-206ENST00000439117 SYT2Q8N9I0 419 aaPredicted RBP16.17■□□□□ 0.18
TSC2-206ENST00000439117 RASGRP4Q8TDF6 673 aa16.17■□□□□ 0.18
TSC2-206ENST00000439117 FAM167BQ9BTA0 163 aa16.17■□□□□ 0.18
TSC2-206ENST00000439117 SLC39A2Q9NP94 309 aa16.17■□□□□ 0.18
TSC2-206ENST00000439117 PCDHA13Q9Y5I0 950 aa16.17■□□□□ 0.18
TSC2-206ENST00000439117 COL4A3BPQ9Y5P4 624 aa16.17■□□□□ 0.18
TSC2-206ENST00000439117 CD19P15391 556 aa16.17■□□□□ 0.18
TSC2-206ENST00000439117 NFIXQ14938 502 aa16.17■□□□□ 0.18
TSC2-206ENST00000439117 OSBPL1AQ9BXW6 950 aa16.17■□□□□ 0.18
TSC2-206ENST00000439117 TMEM60Q9H2L4 133 aa16.17■□□□□ 0.18
TSC2-206ENST00000439117 ZC4H2Q9NQZ6 224 aa16.17■□□□□ 0.18
TSC2-206ENST00000439117 FRMD4AQ9P2Q2 1039 aaPredicted RBP16.17■□□□□ 0.18
TSC2-206ENST00000439117 PRPF3O43395 683 aaKnown RBP16.16■□□□□ 0.18
TSC2-206ENST00000439117 PDHA1P08559 390 aa16.16■□□□□ 0.18
TSC2-206ENST00000439117 ATF7P17544 494 aaPredicted RBP16.16■□□□□ 0.18
TSC2-206ENST00000439117 PPP2R2AP63151 447 aa16.16■□□□□ 0.18
TSC2-206ENST00000439117 FOXO4P98177 505 aa16.16■□□□□ 0.18
TSC2-206ENST00000439117 ANAPC5Q9UJX4 755 aa16.16■□□□□ 0.18
TSC2-206ENST00000439117 H0Y3Z8 333 aa16.16■□□□□ 0.18
TSC2-206ENST00000439117 GYG2O15488 501 aa16.16■□□□□ 0.18
TSC2-206ENST00000439117 FTCDO95954 541 aa16.16■□□□□ 0.18
TSC2-206ENST00000439117 GCFC2P16383 781 aaKnown RBP16.16■□□□□ 0.18
TSC2-206ENST00000439117 EIF4A3P38919 411 aaKnown RBP16.16■□□□□ 0.18
TSC2-206ENST00000439117 TEX2Q8IWB9 1127 aa16.16■□□□□ 0.18
TSC2-206ENST00000439117 TRPC6Q9Y210 931 aa16.16■□□□□ 0.18
TSC2-206ENST00000439117 PTPN22Q9Y2R2 807 aa16.16■□□□□ 0.18
TSC2-206ENST00000439117 CPDO75976 1380 aa16.16■□□□□ 0.18
TSC2-206ENST00000439117 YWHAGP61981 247 aaKnown RBP eCLIP16.16■□□□□ 0.18
TSC2-206ENST00000439117 FAM178BQ8IXR5 827 aa16.16■□□□□ 0.18
TSC2-206ENST00000439117 RDH13Q8NBN7 331 aa16.16■□□□□ 0.18
TSC2-206ENST00000439117 THAP9Q9H5L6 903 aa16.16■□□□□ 0.18
TSC2-206ENST00000439117 MMP1P03956 469 aa16.16■□□□□ 0.18
TSC2-206ENST00000439117 HNRNPCP07910 306 aaKnown RBP eCLIP16.16■□□□□ 0.18
TSC2-206ENST00000439117 CA4P22748 312 aa16.16■□□□□ 0.18
TSC2-206ENST00000439117 KCTD2Q14681 263 aa16.16■□□□□ 0.18
TSC2-206ENST00000439117 CCDC144BQ3MJ40 725 aa16.16■□□□□ 0.18
TSC2-206ENST00000439117 RSBN1LQ6PCB5 846 aaPredicted RBP16.16■□□□□ 0.18
TSC2-206ENST00000439117 PANK4Q9NVE7 773 aa16.16■□□□□ 0.18
TSC2-206ENST00000439117 INPP1P49441 399 aa16.15■□□□□ 0.18
TSC2-206ENST00000439117 KIF11P52732 1056 aa16.15■□□□□ 0.18
TSC2-206ENST00000439117 CYP4A11Q02928 519 aa16.15■□□□□ 0.18
TSC2-206ENST00000439117 SNX1Q13596 522 aa16.15■□□□□ 0.18
TSC2-206ENST00000439117 DACT3Q96B18 629 aaPredicted RBP16.15■□□□□ 0.18
TSC2-206ENST00000439117 MYO3AQ8NEV4 1616 aa16.15■□□□□ 0.18
TSC2-206ENST00000439117 SPATA31A1Q5TZJ5 1347 aa16.15■□□□□ 0.18
TSC2-206ENST00000439117 TARSL2A2RTX5 802 aaKnown RBP16.15■□□□□ 0.18
TSC2-206ENST00000439117 MYO1FO00160 1098 aa16.15■□□□□ 0.18
TSC2-206ENST00000439117 CTIFO43310 598 aaKnown RBP16.15■□□□□ 0.18
TSC2-206ENST00000439117 STAT2P52630 851 aa16.15■□□□□ 0.18
TSC2-206ENST00000439117 RWDD2BP57060 319 aa16.15■□□□□ 0.18
TSC2-206ENST00000439117 DR1Q01658 176 aa16.15■□□□□ 0.18
TSC2-206ENST00000439117 JADE1Q6IE81 842 aa16.15■□□□□ 0.18
TSC2-206ENST00000439117 CCDC125Q86Z20 511 aa16.15■□□□□ 0.18
TSC2-206ENST00000439117 PAIP2BQ9ULR5 123 aaKnown RBP16.15■□□□□ 0.18
TSC2-206ENST00000439117 LRRIQ1Q96JM4 1722 aa16.15■□□□□ 0.18
TSC2-206ENST00000439117 TNNI1P19237 187 aa16.15■□□□□ 0.18
TSC2-206ENST00000439117 YWHAEP62258 255 aaKnown RBP16.15■□□□□ 0.18
TSC2-206ENST00000439117 CCNA1P78396 465 aa16.15■□□□□ 0.18
TSC2-206ENST00000439117 CUL3Q13618 768 aa16.15■□□□□ 0.18
TSC2-206ENST00000439117 SPARCL1Q14515 664 aa16.15■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms