RNA–Protein interactions for RNA: ENST00000438518.5

HDAC6-208, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 610 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-208ENST00000438518 SORBS3O60504 671 aa20.65■□□□□ 0.9
HDAC6-208ENST00000438518 LGALS2P05162 132 aa20.65■□□□□ 0.9
HDAC6-208ENST00000438518 UBA7P41226 1012 aa20.65■□□□□ 0.9
HDAC6-208ENST00000438518 QARSP47897 775 aaKnown RBP20.65■□□□□ 0.9
HDAC6-208ENST00000438518 PSMC5P62195 406 aa20.65■□□□□ 0.9
HDAC6-208ENST00000438518 LRRC41Q15345 812 aa20.65■□□□□ 0.9
HDAC6-208ENST00000438518 CCSAPQ6IQ19 270 aaPredicted RBP20.65■□□□□ 0.9
HDAC6-208ENST00000438518 EIF2AK1Q9BQI3 630 aaKnown RBP20.65■□□□□ 0.9
HDAC6-208ENST00000438518 CCSER1Q9C0I3 900 aa20.65■□□□□ 0.9
HDAC6-208ENST00000438518 NT5C3AQ9H0P0 336 aa20.65■□□□□ 0.9
HDAC6-208ENST00000438518 CSRNP2Q9H175 543 aa20.65■□□□□ 0.9
HDAC6-208ENST00000438518 ZNF302Q9NR11 478 aa20.65■□□□□ 0.9
HDAC6-208ENST00000438518 ERAP1Q9NZ08 941 aa20.65■□□□□ 0.9
HDAC6-208ENST00000438518 MAFBQ9Y5Q3 323 aaPredicted RBP20.65■□□□□ 0.9
HDAC6-208ENST00000438518 A0A1W2PQ27 194 aa20.64■□□□□ 0.89
HDAC6-208ENST00000438518 A0A1W2PQ64 194 aa20.64■□□□□ 0.89
HDAC6-208ENST00000438518 A0A1W2PQD8 194 aa20.64■□□□□ 0.89
HDAC6-208ENST00000438518 GOLGA6L22H0YM25 854 aa20.64■□□□□ 0.89
HDAC6-208ENST00000438518 BACH1O14867 736 aa20.64■□□□□ 0.89
HDAC6-208ENST00000438518 F2P00734 622 aa20.64■□□□□ 0.89
HDAC6-208ENST00000438518 STAT5BP51692 787 aa20.64■□□□□ 0.89
HDAC6-208ENST00000438518 PURAQ00577 322 aaKnown RBP20.64■□□□□ 0.89
HDAC6-208ENST00000438518 AXDND1Q5T1B0 1012 aaPredicted RBP20.64■□□□□ 0.89
HDAC6-208ENST00000438518 SNX29Q8TEQ0 813 aa20.64■□□□□ 0.89
HDAC6-208ENST00000438518 FAM167AQ96KS9 214 aa20.64■□□□□ 0.89
HDAC6-208ENST00000438518 HSD17B14Q9BPX1 270 aa20.64■□□□□ 0.89
HDAC6-208ENST00000438518 PYM1Q9BRP8 204 aaKnown RBP20.64■□□□□ 0.89
HDAC6-208ENST00000438518 SEZ6LQ9BYH1 1024 aa20.64■□□□□ 0.89
HDAC6-208ENST00000438518 ZSWIM4Q9H7M6 989 aa20.64■□□□□ 0.89
HDAC6-208ENST00000438518 GOLGA6L4A6NEF3 574 aa20.63■□□□□ 0.89
HDAC6-208ENST00000438518 LYPLA2O95372 231 aa20.63■□□□□ 0.89
HDAC6-208ENST00000438518 MYCP01106 439 aaPredicted RBP20.63■□□□□ 0.89
HDAC6-208ENST00000438518 ASGR1P07306 291 aa20.63■□□□□ 0.89
HDAC6-208ENST00000438518 HYIQ5T013 277 aa20.63■□□□□ 0.89
HDAC6-208ENST00000438518 SWSAP1Q6NVH7 229 aa20.63■□□□□ 0.89
HDAC6-208ENST00000438518 CABP7Q86V35 215 aa20.63■□□□□ 0.89
HDAC6-208ENST00000438518 CCDC60Q8IWA6 550 aaPredicted RBP20.63■□□□□ 0.89
HDAC6-208ENST00000438518 C4orf19Q8IY42 314 aa20.63■□□□□ 0.89
HDAC6-208ENST00000438518 GLG1Q92896 1179 aa20.63■□□□□ 0.89
HDAC6-208ENST00000438518 CALML4Q96GE6 196 aa20.63■□□□□ 0.89
HDAC6-208ENST00000438518 CHAMP1Q96JM3 812 aa20.63■□□□□ 0.89
HDAC6-208ENST00000438518 C16orf70Q9BSU1 422 aa20.63■□□□□ 0.89
HDAC6-208ENST00000438518 MTG1Q9BT17 334 aaPredicted RBP20.63■□□□□ 0.89
HDAC6-208ENST00000438518 FAM13BQ9NYF5 915 aa20.63■□□□□ 0.89
HDAC6-208ENST00000438518 GABBR1Q9UBS5 961 aa20.63■□□□□ 0.89
HDAC6-208ENST00000438518 CCDC39Q9UFE4 941 aa20.63■□□□□ 0.89
HDAC6-208ENST00000438518 MYADML2A6NDP7 307 aa20.62■□□□□ 0.89
HDAC6-208ENST00000438518 H3BRB1 525 aa20.62■□□□□ 0.89
HDAC6-208ENST00000438518 SLITRK3O94933 977 aa20.62■□□□□ 0.89
HDAC6-208ENST00000438518 PTGS1P23219 599 aa20.62■□□□□ 0.89
HDAC6-208ENST00000438518 CCT6AP40227 531 aaKnown RBP20.62■□□□□ 0.89
HDAC6-208ENST00000438518 BEX3Q00994 111 aa20.62■□□□□ 0.89
HDAC6-208ENST00000438518 GRIN1Q05586 938 aa20.62■□□□□ 0.89
HDAC6-208ENST00000438518 KCNA10Q16322 511 aa20.62■□□□□ 0.89
HDAC6-208ENST00000438518 PDXDC2PQ6P474 469 aa20.62■□□□□ 0.89
HDAC6-208ENST00000438518 CDK5RAP3Q96JB5 506 aa20.62■□□□□ 0.89
HDAC6-208ENST00000438518 CLIC6Q96NY7 704 aa20.62■□□□□ 0.89
HDAC6-208ENST00000438518 LXNQ9BS40 222 aa20.62■□□□□ 0.89
HDAC6-208ENST00000438518 TUT1Q9H6E5 874 aaKnown RBP20.62■□□□□ 0.89
HDAC6-208ENST00000438518 GDPD2Q9HCC8 539 aa20.62■□□□□ 0.89
HDAC6-208ENST00000438518 PHF24Q9UPV7 400 aa20.62■□□□□ 0.89
HDAC6-208ENST00000438518 SCN10AQ9Y5Y9 1956 aa20.61■□□□□ 0.89
HDAC6-208ENST00000438518 TFRCP02786 760 aaKnown RBP20.61■□□□□ 0.89
HDAC6-208ENST00000438518 MYL3P08590 195 aa20.61■□□□□ 0.89
HDAC6-208ENST00000438518 XRCC6P12956 609 aaKnown RBP eCLIP20.61■□□□□ 0.89
HDAC6-208ENST00000438518 CMA1P23946 247 aa20.61■□□□□ 0.89
HDAC6-208ENST00000438518 ACLYP53396 1101 aa20.61■□□□□ 0.89
HDAC6-208ENST00000438518 UTP14CQ5TAP6 766 aaKnown RBP20.61■□□□□ 0.89
HDAC6-208ENST00000438518 RESP18Q5W5W9 173 aa20.61■□□□□ 0.89
HDAC6-208ENST00000438518 CATSPER3Q86XQ3 398 aa20.61■□□□□ 0.89
HDAC6-208ENST00000438518 SYMPKQ92797 1274 aaKnown RBP20.61■□□□□ 0.89
HDAC6-208ENST00000438518 DYDC2Q96IM9 177 aa20.61■□□□□ 0.89
HDAC6-208ENST00000438518 GLT1D1Q96MS3 346 aa20.61■□□□□ 0.89
HDAC6-208ENST00000438518 PCYT2Q99447 389 aa20.61■□□□□ 0.89
HDAC6-208ENST00000438518 TELO2Q9Y4R8 837 aa20.61■□□□□ 0.89
HDAC6-208ENST00000438518 PPME1Q9Y570 386 aa20.61■□□□□ 0.89
HDAC6-208ENST00000438518 XKR3Q5GH77 459 aa20.6■□□□□ 0.89
HDAC6-208ENST00000438518 COL13A1Q5TAT6 717 aaPredicted RBP20.6■□□□□ 0.89
HDAC6-208ENST00000438518 SHC4Q6S5L8 630 aa20.6■□□□□ 0.89
HDAC6-208ENST00000438518 BANK1Q8NDB2 785 aa20.6■□□□□ 0.89
HDAC6-208ENST00000438518 RASSF8Q8NHQ8 419 aa20.6■□□□□ 0.89
HDAC6-208ENST00000438518 BBXQ8WY36 941 aaPredicted RBP20.6■□□□□ 0.89
HDAC6-208ENST00000438518 NACC1Q96RE7 527 aa20.6■□□□□ 0.89
HDAC6-208ENST00000438518 MMTAG2Q9BU76 263 aaKnown RBP20.6■□□□□ 0.89
HDAC6-208ENST00000438518 FAM237AA0A1B0GTK4 181 aa20.59■□□□□ 0.89
HDAC6-208ENST00000438518 PP2D1A8MPX8 630 aa20.59■□□□□ 0.89
HDAC6-208ENST00000438518 HAS3O00219 553 aa20.59■□□□□ 0.89
HDAC6-208ENST00000438518 MED24O75448 989 aa20.59■□□□□ 0.89
HDAC6-208ENST00000438518 OATP04181 439 aa20.59■□□□□ 0.89
HDAC6-208ENST00000438518 MYCNP04198 464 aaPredicted RBP20.59■□□□□ 0.89
HDAC6-208ENST00000438518 ZNF286BP0CG31 522 aa20.59■□□□□ 0.89
HDAC6-208ENST00000438518 SPATA31C1P0DKV0 1188 aa20.59■□□□□ 0.89
HDAC6-208ENST00000438518 CYP4A11Q02928 519 aa20.59■□□□□ 0.89
HDAC6-208ENST00000438518 CCDC73Q6ZRK6 1079 aa20.59■□□□□ 0.89
HDAC6-208ENST00000438518 OTUD6AQ7L8S5 288 aa20.59■□□□□ 0.89
HDAC6-208ENST00000438518 TPH2Q8IWU9 490 aa20.59■□□□□ 0.89
HDAC6-208ENST00000438518 ATP8B4Q8TF62 1192 aa20.59■□□□□ 0.89
HDAC6-208ENST00000438518 MRPS27Q92552 414 aaKnown RBP20.59■□□□□ 0.89
HDAC6-208ENST00000438518 EPSTI1Q96J88 318 aa20.59■□□□□ 0.89
HDAC6-208ENST00000438518 NRBP2Q9NSY0 501 aa20.59■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms