RNA–Protein interactions for RNA: ENST00000438092.6

SHPRH-206, Transcript of SNF2 histone linker PHD RING helicase, humanhuman

TSL 1 (best) BASIC

Gene SHPRH, Length 6,994 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHPRH-206ENST00000438092 MSH2P43246 934 aa11.16□□□□□ -0.62
SHPRH-206ENST00000438092 ZNF445P59923 1031 aa11.16□□□□□ -0.62
SHPRH-206ENST00000438092 CYFIP1Q7L576 1253 aa11.16□□□□□ -0.62
SHPRH-206ENST00000438092 DDX55Q8NHQ9 600 aaKnown RBP eCLIP11.16□□□□□ -0.62
SHPRH-206ENST00000438092 RMDN3Q96TC7 470 aa11.16□□□□□ -0.62
SHPRH-206ENST00000438092 SAMSN1Q9NSI8 373 aaKnown RBP11.16□□□□□ -0.62
SHPRH-206ENST00000438092 INSRP06213 1382 aa11.16□□□□□ -0.62
SHPRH-206ENST00000438092 SOWAHDA6NJG2 315 aa11.16□□□□□ -0.62
SHPRH-206ENST00000438092 CREB3O43889 395 aa11.16□□□□□ -0.62
SHPRH-206ENST00000438092 MTMR1Q13613 665 aa11.16□□□□□ -0.62
SHPRH-206ENST00000438092 POTEDQ86YR6 584 aa11.16□□□□□ -0.62
SHPRH-206ENST00000438092 BHMT2Q9H2M3 363 aa11.16□□□□□ -0.62
SHPRH-206ENST00000438092 FOXP1Q9H334 677 aaPredicted RBP11.16□□□□□ -0.62
SHPRH-206ENST00000438092 TLK1Q9UKI8 766 aa11.16□□□□□ -0.62
SHPRH-206ENST00000438092 GCC2Q8IWJ2 1684 aa11.16□□□□□ -0.62
SHPRH-206ENST00000438092 GOLGA8MH3BSY2 632 aa11.15□□□□□ -0.62
SHPRH-206ENST00000438092 SLMAPQ14BN4 828 aa11.15□□□□□ -0.62
SHPRH-206ENST00000438092 TTC1Q99614 292 aa11.15□□□□□ -0.62
SHPRH-206ENST00000438092 KIF1BO60333 1816 aa11.15□□□□□ -0.62
SHPRH-206ENST00000438092 CFLARO15519 480 aa11.15□□□□□ -0.62
SHPRH-206ENST00000438092 CASP1P29466 404 aa11.15□□□□□ -0.62
SHPRH-206ENST00000438092 ELMOD1Q8N336 334 aa11.15□□□□□ -0.62
SHPRH-206ENST00000438092 DPYSL4O14531 572 aa11.15□□□□□ -0.62
SHPRH-206ENST00000438092 PSMA2P25787 234 aa11.15□□□□□ -0.62
SHPRH-206ENST00000438092 LCA5Q86VQ0 697 aa11.15□□□□□ -0.62
SHPRH-206ENST00000438092 CAPS2Q9BXY5 557 aa11.15□□□□□ -0.62
SHPRH-206ENST00000438092 DHX36Q9H2U1 1008 aaKnown RBP11.15□□□□□ -0.62
SHPRH-206ENST00000438092 EPB41L3Q9Y2J2 1087 aaPredicted RBP11.15□□□□□ -0.62
SHPRH-206ENST00000438092 ZNF233A6NK53 670 aa11.15□□□□□ -0.62
SHPRH-206ENST00000438092 MGEA5O60502 916 aa11.15□□□□□ -0.62
SHPRH-206ENST00000438092 TTC4O95801 387 aa11.15□□□□□ -0.62
SHPRH-206ENST00000438092 PHEXP78562 749 aa11.15□□□□□ -0.62
SHPRH-206ENST00000438092 TRIM67Q6ZTA4 783 aa11.15□□□□□ -0.62
SHPRH-206ENST00000438092 TBRG4Q969Z0 631 aaKnown RBP eCLIP11.15□□□□□ -0.62
SHPRH-206ENST00000438092 RNF26Q9BY78 433 aaPredicted RBP11.15□□□□□ -0.62
SHPRH-206ENST00000438092 TMEM206Q9H813 350 aa11.15□□□□□ -0.62
SHPRH-206ENST00000438092 AFF2P51816 1311 aa11.15□□□□□ -0.62
SHPRH-206ENST00000438092 SAMD9Q5K651 1589 aa11.15□□□□□ -0.62
SHPRH-206ENST00000438092 MMP1P03956 469 aa11.15□□□□□ -0.63
SHPRH-206ENST00000438092 MXI1P50539 228 aa11.15□□□□□ -0.63
SHPRH-206ENST00000438092 STX1BP61266 288 aa11.15□□□□□ -0.63
SHPRH-206ENST00000438092 C11orf57Q6ZUT1 292 aaPredicted RBP11.15□□□□□ -0.63
SHPRH-206ENST00000438092 MYRIPQ8NFW9 859 aa11.15□□□□□ -0.63
SHPRH-206ENST00000438092 CDHR1Q96JP9 859 aa11.15□□□□□ -0.63
SHPRH-206ENST00000438092 PCDHA6Q9UN73 950 aa11.15□□□□□ -0.63
SHPRH-206ENST00000438092 PCDHA8Q9Y5H6 950 aa11.15□□□□□ -0.63
SHPRH-206ENST00000438092 USP17L15C9J2P7 530 aa11.15□□□□□ -0.63
SHPRH-206ENST00000438092 USP17L13C9JLJ4 530 aa11.15□□□□□ -0.63
SHPRH-206ENST00000438092 USP17L11C9JVI0 530 aa11.15□□□□□ -0.63
SHPRH-206ENST00000438092 USP17L18D6R9N7 530 aa11.15□□□□□ -0.63
SHPRH-206ENST00000438092 USP17L22D6RA61 530 aa11.15□□□□□ -0.63
SHPRH-206ENST00000438092 USP17L17D6RBQ6 530 aa11.15□□□□□ -0.63
SHPRH-206ENST00000438092 USP17L19D6RCP7 530 aa11.15□□□□□ -0.63
SHPRH-206ENST00000438092 USP17L20D6RJB6 530 aa11.15□□□□□ -0.63
SHPRH-206ENST00000438092 PRDX5P30044 214 aa11.15□□□□□ -0.63
SHPRH-206ENST00000438092 USP17L24Q0WX57 530 aa11.15□□□□□ -0.63
SHPRH-206ENST00000438092 ZNF658Q5TYW1 1059 aaPredicted RBP11.15□□□□□ -0.63
SHPRH-206ENST00000438092 USP17L6PQ6QN14 398 aa11.15□□□□□ -0.63
SHPRH-206ENST00000438092 ARHGEF25Q86VW2 580 aa11.15□□□□□ -0.63
SHPRH-206ENST00000438092 THEM5Q8N1Q8 247 aa11.15□□□□□ -0.63
SHPRH-206ENST00000438092 RBM46Q8TBY0 533 aaKnown RBP11.15□□□□□ -0.63
SHPRH-206ENST00000438092 AFF4Q9UHB7 1163 aaKnown RBP11.15□□□□□ -0.63
SHPRH-206ENST00000438092 HEY1Q9Y5J3 304 aa11.15□□□□□ -0.63
SHPRH-206ENST00000438092 PNMA6FA0A0J9YX94 578 aa11.14□□□□□ -0.63
SHPRH-206ENST00000438092 ESRRBO95718 433 aa11.14□□□□□ -0.63
SHPRH-206ENST00000438092 RBM6P78332 1123 aaKnown RBP11.14□□□□□ -0.63
SHPRH-206ENST00000438092 NME3Q13232 169 aa11.14□□□□□ -0.63
SHPRH-206ENST00000438092 GBP5Q96PP8 586 aa11.14□□□□□ -0.63
SHPRH-206ENST00000438092 NUDCD1Q96RS6 583 aa11.14□□□□□ -0.63
SHPRH-206ENST00000438092 ANLNQ9NQW6 1124 aa11.14□□□□□ -0.63
SHPRH-206ENST00000438092 KRT82Q9NSB4 513 aa11.14□□□□□ -0.63
SHPRH-206ENST00000438092 SUCLA2Q9P2R7 463 aaPredicted RBP11.14□□□□□ -0.63
SHPRH-206ENST00000438092 SH2B2O14492 632 aaPredicted RBP11.14□□□□□ -0.63
SHPRH-206ENST00000438092 UPP2O95045 317 aa11.14□□□□□ -0.63
SHPRH-206ENST00000438092 MYL1P05976 194 aa11.14□□□□□ -0.63
SHPRH-206ENST00000438092 ARHGAP25P42331 645 aa11.14□□□□□ -0.63
SHPRH-206ENST00000438092 BBS9Q3SYG4 887 aa11.14□□□□□ -0.63
SHPRH-206ENST00000438092 FAM117BQ6P1L5 589 aa11.14□□□□□ -0.63
SHPRH-206ENST00000438092 NSUN7Q8NE18 718 aaKnown RBP11.14□□□□□ -0.63
SHPRH-206ENST00000438092 COPRSQ9NQ92 184 aa11.14□□□□□ -0.63
SHPRH-206ENST00000438092 GINM1Q9NU53 330 aa11.14□□□□□ -0.63
SHPRH-206ENST00000438092 TMEM260Q9NX78 707 aa11.14□□□□□ -0.63
SHPRH-206ENST00000438092 PLS3P13797 630 aa11.14□□□□□ -0.63
SHPRH-206ENST00000438092 SPP2Q13103 211 aa11.14□□□□□ -0.63
SHPRH-206ENST00000438092 SEPT2Q15019 361 aa11.14□□□□□ -0.63
SHPRH-206ENST00000438092 ARMCX2Q7L311 632 aa11.14□□□□□ -0.63
SHPRH-206ENST00000438092 MMP19Q99542 508 aa11.14□□□□□ -0.63
SHPRH-206ENST00000438092 PDE11AQ9HCR9 933 aa11.14□□□□□ -0.63
SHPRH-206ENST00000438092 VCX3AQ9NNX9 186 aa11.14□□□□□ -0.63
SHPRH-206ENST00000438092 BCAP29Q9UHQ4 241 aa11.14□□□□□ -0.63
SHPRH-206ENST00000438092 PNMA2Q9UL42 364 aa11.14□□□□□ -0.63
SHPRH-206ENST00000438092 USH1CQ9Y6N9 552 aa11.14□□□□□ -0.63
SHPRH-206ENST00000438092 CYP27A1Q02318 531 aa11.14□□□□□ -0.63
SHPRH-206ENST00000438092 PPP2R5EQ16537 467 aa11.14□□□□□ -0.63
SHPRH-206ENST00000438092 ZNF568Q3ZCX4 644 aa11.14□□□□□ -0.63
SHPRH-206ENST00000438092 ERICH1Q86X53 443 aa11.14□□□□□ -0.63
SHPRH-206ENST00000438092 SCYL3Q8IZE3 742 aa11.14□□□□□ -0.63
SHPRH-206ENST00000438092 BCL2L12Q9HB09 334 aa11.14□□□□□ -0.63
SHPRH-206ENST00000438092 DAAM1Q9Y4D1 1078 aa11.14□□□□□ -0.63
SHPRH-206ENST00000438092 TCP1P17987 556 aaKnown RBP11.14□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms