RNA–Protein interactions for RNA: ENST00000437983.2

SMAD9-IT1-201, SMAD9 intronic transcript 1, humanhuman

TSL 3 BASIC

Gene SMAD9-IT1, Length 504 nt, Biotype sense intronic.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD9-IT1-201ENST00000437983 SYTL5Q8TDW5 730 aaPredicted RBP14.45□□□□□ -0.1
SMAD9-IT1-201ENST00000437983 DCAF4Q8WV16 495 aa14.45□□□□□ -0.1
SMAD9-IT1-201ENST00000437983 HINFPQ9BQA5 517 aa14.45□□□□□ -0.1
SMAD9-IT1-201ENST00000437983 MRVI1Q9Y6F6 885 aa14.45□□□□□ -0.1
SMAD9-IT1-201ENST00000437983 M0R2C6 588 aa14.44□□□□□ -0.1
SMAD9-IT1-201ENST00000437983 GPAA1O43292 621 aa14.44□□□□□ -0.1
SMAD9-IT1-201ENST00000437983 CAND2O75155 1236 aa14.44□□□□□ -0.1
SMAD9-IT1-201ENST00000437983 AOC1P19801 751 aa14.44□□□□□ -0.1
SMAD9-IT1-201ENST00000437983 GATMP50440 423 aa14.44□□□□□ -0.1
SMAD9-IT1-201ENST00000437983 ERVFC1P60507 584 aa14.44□□□□□ -0.1
SMAD9-IT1-201ENST00000437983 KCNC3Q14003 757 aa14.44□□□□□ -0.1
SMAD9-IT1-201ENST00000437983 MYSM1Q5VVJ2 828 aa14.44□□□□□ -0.1
SMAD9-IT1-201ENST00000437983 LLGL2Q6P1M3 1020 aa14.44□□□□□ -0.1
SMAD9-IT1-201ENST00000437983 LINC01599Q8WXQ3 324 aa14.44□□□□□ -0.1
SMAD9-IT1-201ENST00000437983 SPATA33Q96N06 139 aa14.44□□□□□ -0.1
SMAD9-IT1-201ENST00000437983 POMKQ9H5K3 350 aa14.44□□□□□ -0.1
SMAD9-IT1-201ENST00000437983 SETD4Q9NVD3 440 aa14.44□□□□□ -0.1
SMAD9-IT1-201ENST00000437983 TTC3P53804 2025 aa14.44□□□□□ -0.1
SMAD9-IT1-201ENST00000437983 GPR179Q6PRD1 2367 aa14.44□□□□□ -0.1
SMAD9-IT1-201ENST00000437983 EIF2AK2P19525 551 aaKnown RBP14.43□□□□□ -0.1
SMAD9-IT1-201ENST00000437983 SP2Q02086 613 aa14.43□□□□□ -0.1
SMAD9-IT1-201ENST00000437983 LPIN1Q14693 890 aa14.43□□□□□ -0.1
SMAD9-IT1-201ENST00000437983 ITPRIPQ8IWB1 547 aa14.43□□□□□ -0.1
SMAD9-IT1-201ENST00000437983 CMTR2Q8IYT2 770 aaKnown RBP14.43□□□□□ -0.1
SMAD9-IT1-201ENST00000437983 CRIPAKQ8N1N5 446 aa14.43□□□□□ -0.1
SMAD9-IT1-201ENST00000437983 NSUN6Q8TEA1 469 aaKnown RBP14.43□□□□□ -0.1
SMAD9-IT1-201ENST00000437983 KIF1BPQ96EK5 621 aa14.43□□□□□ -0.1
SMAD9-IT1-201ENST00000437983 RMDN3Q96TC7 470 aa14.43□□□□□ -0.1
SMAD9-IT1-201ENST00000437983 BCAS3Q9H6U6 928 aa14.43□□□□□ -0.1
SMAD9-IT1-201ENST00000437983 EHMT1Q9H9B1 1298 aa14.43□□□□□ -0.1
SMAD9-IT1-201ENST00000437983 NR2E1Q9Y466 385 aa14.43□□□□□ -0.1
SMAD9-IT1-201ENST00000437983 TSPY2A6NKD2 308 aa14.42□□□□□ -0.1
SMAD9-IT1-201ENST00000437983 H3BRB1 525 aa14.42□□□□□ -0.1
SMAD9-IT1-201ENST00000437983 RLBP1P12271 317 aa14.42□□□□□ -0.1
SMAD9-IT1-201ENST00000437983 NOVP48745 357 aa14.42□□□□□ -0.1
SMAD9-IT1-201ENST00000437983 PPARAQ07869 468 aa14.42□□□□□ -0.1
SMAD9-IT1-201ENST00000437983 HSP90AB4PQ58FF6 505 aa14.42□□□□□ -0.1
SMAD9-IT1-201ENST00000437983 CELF3Q5SZQ8 465 aaKnown RBP14.42□□□□□ -0.1
SMAD9-IT1-201ENST00000437983 ZKSCAN2Q63HK3 967 aa14.42□□□□□ -0.1
SMAD9-IT1-201ENST00000437983 TMEM184AQ6ZMB5 413 aa14.42□□□□□ -0.1
SMAD9-IT1-201ENST00000437983 RTN4RL1Q86UN2 441 aaPredicted RBP14.42□□□□□ -0.1
SMAD9-IT1-201ENST00000437983 RGS22Q8NE09 1264 aa14.42□□□□□ -0.1
SMAD9-IT1-201ENST00000437983 RIN2Q8WYP3 895 aaPredicted RBP14.42□□□□□ -0.1
SMAD9-IT1-201ENST00000437983 DDX12PQ92771 950 aa14.42□□□□□ -0.1
SMAD9-IT1-201ENST00000437983 SEMA4AQ9H3S1 761 aa14.42□□□□□ -0.1
SMAD9-IT1-201ENST00000437983 TUT1Q9H6E5 874 aaKnown RBP14.42□□□□□ -0.1
SMAD9-IT1-201ENST00000437983 LIMD1Q9UGP4 676 aa14.42□□□□□ -0.1
SMAD9-IT1-201ENST00000437983 DDX52Q9Y2R4 599 aaKnown RBP eCLIP14.42□□□□□ -0.1
SMAD9-IT1-201ENST00000437983 WDR19Q8NEZ3 1342 aa14.41□□□□□ -0.1
SMAD9-IT1-201ENST00000437983 PATL2C9JE40 543 aaKnown RBP14.41□□□□□ -0.1
SMAD9-IT1-201ENST00000437983 EIF3JO75822 258 aaKnown RBP14.41□□□□□ -0.1
SMAD9-IT1-201ENST00000437983 GGPS1O95749 300 aa14.41□□□□□ -0.1
SMAD9-IT1-201ENST00000437983 WEE2P0C1S8 567 aa14.41□□□□□ -0.1
SMAD9-IT1-201ENST00000437983 ATXN1P54253 815 aaKnown RBP14.41□□□□□ -0.1
SMAD9-IT1-201ENST00000437983 RUBCNQ92622 972 aa14.41□□□□□ -0.1
SMAD9-IT1-201ENST00000437983 APPBP2Q92624 585 aa14.41□□□□□ -0.1
SMAD9-IT1-201ENST00000437983 IWS1Q96ST2 819 aa14.41□□□□□ -0.1
SMAD9-IT1-201ENST00000437983 CDCA3Q99618 268 aaPredicted RBP14.41□□□□□ -0.1
SMAD9-IT1-201ENST00000437983 CPVLQ9H3G5 476 aa14.41□□□□□ -0.1
SMAD9-IT1-201ENST00000437983 LGALS2P05162 132 aa14.4□□□□□ -0.1
SMAD9-IT1-201ENST00000437983 NR3C2P08235 984 aa14.4□□□□□ -0.1
SMAD9-IT1-201ENST00000437983 HOXB3P14651 431 aaPredicted RBP14.4□□□□□ -0.1
SMAD9-IT1-201ENST00000437983 CTDSPL2Q05D32 466 aa14.4□□□□□ -0.1
SMAD9-IT1-201ENST00000437983 MGAT3Q09327 533 aa14.4□□□□□ -0.1
SMAD9-IT1-201ENST00000437983 APOBRQ0VD83 1088 aa14.4□□□□□ -0.1
SMAD9-IT1-201ENST00000437983 PPP4R3BQ5MIZ7 849 aa14.4□□□□□ -0.1
SMAD9-IT1-201ENST00000437983 ARHGEF16Q5VV41 709 aa14.4□□□□□ -0.1
SMAD9-IT1-201ENST00000437983 RUFY4Q6ZNE9 571 aa14.4□□□□□ -0.1
SMAD9-IT1-201ENST00000437983 GPKOWQ92917 476 aaPredicted RBP eCLIP14.4□□□□□ -0.1
SMAD9-IT1-201ENST00000437983 FSCN2O14926 492 aa14.39□□□□□ -0.11
SMAD9-IT1-201ENST00000437983 GNAT2P19087 354 aa14.39□□□□□ -0.11
SMAD9-IT1-201ENST00000437983 ADAM17P78536 824 aa14.39□□□□□ -0.11
SMAD9-IT1-201ENST00000437983 ARHGAP4P98171 946 aa14.39□□□□□ -0.11
SMAD9-IT1-201ENST00000437983 AMHR2Q16671 573 aa14.39□□□□□ -0.11
SMAD9-IT1-201ENST00000437983 PLPP4Q5VZY2 271 aa14.39□□□□□ -0.11
SMAD9-IT1-201ENST00000437983 SEC62Q99442 399 aaKnown RBP14.39□□□□□ -0.11
SMAD9-IT1-201ENST00000437983 TMEM47Q9BQJ4 181 aa14.39□□□□□ -0.11
SMAD9-IT1-201ENST00000437983 FAM117AQ9C073 453 aa14.39□□□□□ -0.11
SMAD9-IT1-201ENST00000437983 AGO3Q9H9G7 860 aaKnown RBP14.39□□□□□ -0.11
SMAD9-IT1-201ENST00000437983 ERVK-5Q9HDB9 667 aa14.39□□□□□ -0.11
SMAD9-IT1-201ENST00000437983 HCSTQ9UBK5 93 aa14.39□□□□□ -0.11
SMAD9-IT1-201ENST00000437983 ZNF316A6NFI3 1004 aaPredicted RBP14.38□□□□□ -0.11
SMAD9-IT1-201ENST00000437983 HIDE1A8MVS5 230 aa14.38□□□□□ -0.11
SMAD9-IT1-201ENST00000437983 RNF113AO15541 343 aaKnown RBP14.38□□□□□ -0.11
SMAD9-IT1-201ENST00000437983 RANBP6O60518 1105 aaKnown RBP14.38□□□□□ -0.11
SMAD9-IT1-201ENST00000437983 FGF18O76093 207 aa14.38□□□□□ -0.11
SMAD9-IT1-201ENST00000437983 SLC3A2P08195 630 aaKnown RBP14.38□□□□□ -0.11
SMAD9-IT1-201ENST00000437983 PDHBP11177 359 aa14.38□□□□□ -0.11
SMAD9-IT1-201ENST00000437983 UBA1P22314 1058 aaKnown RBP14.38□□□□□ -0.11
SMAD9-IT1-201ENST00000437983 TRIM50Q86XT4 487 aa14.38□□□□□ -0.11
SMAD9-IT1-201ENST00000437983 NPAS4Q8IUM7 802 aa14.38□□□□□ -0.11
SMAD9-IT1-201ENST00000437983 FEZF2Q8TBJ5 459 aa14.38□□□□□ -0.11
SMAD9-IT1-201ENST00000437983 LMBR1Q8WVP7 490 aa14.38□□□□□ -0.11
SMAD9-IT1-201ENST00000437983 RTP3Q9BQQ7 232 aa14.38□□□□□ -0.11
SMAD9-IT1-201ENST00000437983 PXMP2Q9NR77 195 aa14.38□□□□□ -0.11
SMAD9-IT1-201ENST00000437983 PNMA2Q9UL42 364 aa14.38□□□□□ -0.11
SMAD9-IT1-201ENST00000437983 TELO2Q9Y4R8 837 aa14.38□□□□□ -0.11
SMAD9-IT1-201ENST00000437983 DCDC2BA2VCK2 349 aa14.37□□□□□ -0.11
SMAD9-IT1-201ENST00000437983 SRGAP2BP0DMP2 458 aa14.37□□□□□ -0.11
SMAD9-IT1-201ENST00000437983 MYCLP12524 364 aaPredicted RBP14.37□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms