RNA–Protein interactions for RNA: ENST00000436412.1

NIF3L1-208, Transcript of NGG1 interacting factor 3 like 1, humanhuman

TSL 3

Gene NIF3L1, Length 479 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIF3L1-208ENST00000436412 GIMAP6Q6P9H5 292 aa10□□□□□ -0.81
NIF3L1-208ENST00000436412 VWCEQ96DN2 955 aa10□□□□□ -0.81
NIF3L1-208ENST00000436412 ALDH8A1Q9H2A2 487 aaPredicted RBP10□□□□□ -0.81
NIF3L1-208ENST00000436412 MKNK2Q9HBH9 465 aa10□□□□□ -0.81
NIF3L1-208ENST00000436412 AVENQ9NQS1 362 aaPredicted RBP10□□□□□ -0.81
NIF3L1-208ENST00000436412 LMCD1Q9NZU5 365 aa10□□□□□ -0.81
NIF3L1-208ENST00000436412 TFIP11Q9UBB9 837 aaKnown RBP10□□□□□ -0.81
NIF3L1-208ENST00000436412 RIF1Q5UIP0 2472 aaKnown RBP10□□□□□ -0.81
NIF3L1-208ENST00000436412 C11orf97A0A1B0GVM6 126 aaPredicted RBP9.99□□□□□ -0.81
NIF3L1-208ENST00000436412 SFI1A8K8P3 1242 aa9.99□□□□□ -0.81
NIF3L1-208ENST00000436412 ATP5JP18859 108 aa9.99□□□□□ -0.81
NIF3L1-208ENST00000436412 DGKGP49619 791 aa9.99□□□□□ -0.81
NIF3L1-208ENST00000436412 CNTN2Q02246 1040 aa9.99□□□□□ -0.81
NIF3L1-208ENST00000436412 TTLL4Q14679 1199 aa9.99□□□□□ -0.81
NIF3L1-208ENST00000436412 LRRC69Q6ZNQ3 347 aa9.99□□□□□ -0.81
NIF3L1-208ENST00000436412 TSEN2Q8NCE0 465 aaKnown RBP9.99□□□□□ -0.81
NIF3L1-208ENST00000436412 GMCL1P1Q8NEA9 526 aa9.99□□□□□ -0.81
NIF3L1-208ENST00000436412 TET1Q8NFU7 2136 aa9.99□□□□□ -0.81
NIF3L1-208ENST00000436412 SCLYQ96I15 445 aa9.99□□□□□ -0.81
NIF3L1-208ENST00000436412 SUV39H2Q9H5I1 410 aa9.99□□□□□ -0.81
NIF3L1-208ENST00000436412 A1CFQ9NQ94 594 aaKnown RBP9.99□□□□□ -0.81
NIF3L1-208ENST00000436412 CLIP2Q9UDT6 1046 aa9.99□□□□□ -0.81
NIF3L1-208ENST00000436412 ZNF232Q9UNY5 417 aa9.99□□□□□ -0.81
NIF3L1-208ENST00000436412 MAFBQ9Y5Q3 323 aaPredicted RBP9.99□□□□□ -0.81
NIF3L1-208ENST00000436412 MYO7AQ13402 2215 aa9.98□□□□□ -0.81
NIF3L1-208ENST00000436412 MYH4Q9Y623 1939 aa9.98□□□□□ -0.81
NIF3L1-208ENST00000436412 IGKV6D-41A0A0C4DH26 115 aa9.98□□□□□ -0.81
NIF3L1-208ENST00000436412 KRBA1A5PL33 1030 aa9.98□□□□□ -0.81
NIF3L1-208ENST00000436412 PI4K2BG5E9Z4 385 aa9.98□□□□□ -0.81
NIF3L1-208ENST00000436412 RFXAPO00287 272 aa9.98□□□□□ -0.81
NIF3L1-208ENST00000436412 HMMRO75330 724 aa9.98□□□□□ -0.81
NIF3L1-208ENST00000436412 PROCP04070 461 aa9.98□□□□□ -0.81
NIF3L1-208ENST00000436412 ADH6P28332 368 aa9.98□□□□□ -0.81
NIF3L1-208ENST00000436412 TAP1Q03518 808 aa9.98□□□□□ -0.81
NIF3L1-208ENST00000436412 LAMC2Q13753 1193 aa9.98□□□□□ -0.81
NIF3L1-208ENST00000436412 ZNF468Q5VIY5 522 aaPredicted RBP9.98□□□□□ -0.81
NIF3L1-208ENST00000436412 CHURC1Q8WUH1 139 aa9.98□□□□□ -0.81
NIF3L1-208ENST00000436412 ARNTL2Q8WYA1 636 aa9.98□□□□□ -0.81
NIF3L1-208ENST00000436412 MDFIQ99750 246 aa9.98□□□□□ -0.81
NIF3L1-208ENST00000436412 HAUS7Q99871 368 aa9.98□□□□□ -0.81
NIF3L1-208ENST00000436412 VTA1Q9NP79 307 aa9.98□□□□□ -0.81
NIF3L1-208ENST00000436412 HOMER2Q9NSB8 354 aa9.98□□□□□ -0.81
NIF3L1-208ENST00000436412 RNF146Q9NTX7 359 aa9.98□□□□□ -0.81
NIF3L1-208ENST00000436412 MTMR4Q9NYA4 1195 aa9.98□□□□□ -0.81
NIF3L1-208ENST00000436412 MARK1Q9P0L2 795 aa9.98□□□□□ -0.81
NIF3L1-208ENST00000436412 GPC6Q9Y625 555 aaPredicted RBP9.98□□□□□ -0.81
NIF3L1-208ENST00000436412 TNKSO95271 1327 aa9.98□□□□□ -0.81
NIF3L1-208ENST00000436412 ZFHX2Q9C0A1 2572 aaPredicted RBP9.98□□□□□ -0.81
NIF3L1-208ENST00000436412 ZNF318Q5VUA4 2279 aa9.98□□□□□ -0.81
NIF3L1-208ENST00000436412 MYH7P12883 1935 aa9.97□□□□□ -0.81
NIF3L1-208ENST00000436412 LRRC37A2A6NM11 1700 aa9.97□□□□□ -0.81
NIF3L1-208ENST00000436412 LOC102724159A0A0B4J2E5 919 aa9.97□□□□□ -0.81
NIF3L1-208ENST00000436412 A6NJR5 290 aa9.97□□□□□ -0.81
NIF3L1-208ENST00000436412 PRR33A8MZF0 331 aa9.97□□□□□ -0.81
NIF3L1-208ENST00000436412 PLA2G6O60733 806 aa9.97□□□□□ -0.81
NIF3L1-208ENST00000436412 RAB11FIP3O75154 756 aa9.97□□□□□ -0.81
NIF3L1-208ENST00000436412 BAIAP3O94812 1187 aa9.97□□□□□ -0.81
NIF3L1-208ENST00000436412 TTLL1O95922 423 aa9.97□□□□□ -0.81
NIF3L1-208ENST00000436412 RLBP1P12271 317 aa9.97□□□□□ -0.81
NIF3L1-208ENST00000436412 BMP3P12645 472 aa9.97□□□□□ -0.81
NIF3L1-208ENST00000436412 STAT2P52630 851 aa9.97□□□□□ -0.81
NIF3L1-208ENST00000436412 PSMA6P60900 246 aaKnown RBP9.97□□□□□ -0.81
NIF3L1-208ENST00000436412 PSMC6P62333 389 aa9.97□□□□□ -0.81
NIF3L1-208ENST00000436412 PWP2Q15269 919 aaKnown RBP9.97□□□□□ -0.81
NIF3L1-208ENST00000436412 DUSP28Q4G0W2 176 aa9.97□□□□□ -0.81
NIF3L1-208ENST00000436412 BRDTQ58F21 947 aaPredicted RBP9.97□□□□□ -0.81
NIF3L1-208ENST00000436412 TAPT1Q6NXT6 567 aa9.97□□□□□ -0.81
NIF3L1-208ENST00000436412 DEFB128Q7Z7B8 93 aa9.97□□□□□ -0.81
NIF3L1-208ENST00000436412 FAM160B2Q86V87 743 aa9.97□□□□□ -0.81
NIF3L1-208ENST00000436412 HERC6Q8IVU3 1022 aa9.97□□□□□ -0.81
NIF3L1-208ENST00000436412 ZNF444Q8N0Y2 327 aaPredicted RBP9.97□□□□□ -0.81
NIF3L1-208ENST00000436412 RETREG2Q8NC44 543 aa9.97□□□□□ -0.81
NIF3L1-208ENST00000436412 MORC4Q8TE76 937 aa9.97□□□□□ -0.81
NIF3L1-208ENST00000436412 STRBPQ96SI9 672 aaKnown RBP9.97□□□□□ -0.81
NIF3L1-208ENST00000436412 SPOCK3Q9BQ16 436 aa9.97□□□□□ -0.81
NIF3L1-208ENST00000436412 PUS7LQ9H0K6 701 aaKnown RBP9.97□□□□□ -0.81
NIF3L1-208ENST00000436412 BOLA2Q9H3K6 86 aa9.97□□□□□ -0.81
NIF3L1-208ENST00000436412 C11orf16Q9NQ32 467 aa9.97□□□□□ -0.81
NIF3L1-208ENST00000436412 TRMT13Q9NUP7 481 aaKnown RBP9.97□□□□□ -0.81
NIF3L1-208ENST00000436412 SCN10AQ9Y5Y9 1956 aa9.97□□□□□ -0.81
NIF3L1-208ENST00000436412 EPOPA6NHQ4 379 aa9.96□□□□□ -0.82
NIF3L1-208ENST00000436412 TMEM232C9JQI7 657 aa9.96□□□□□ -0.82
NIF3L1-208ENST00000436412 KPNA6O60684 536 aa9.96□□□□□ -0.82
NIF3L1-208ENST00000436412 CYP2C9P11712 490 aa9.96□□□□□ -0.82
NIF3L1-208ENST00000436412 CPT1AP50416 773 aa9.96□□□□□ -0.82
NIF3L1-208ENST00000436412 PCBP4P57723 403 aaKnown RBP9.96□□□□□ -0.82
NIF3L1-208ENST00000436412 GRB10Q13322 594 aa9.96□□□□□ -0.82
NIF3L1-208ENST00000436412 BFSP2Q13515 415 aa9.96□□□□□ -0.82
NIF3L1-208ENST00000436412 SLFN13Q68D06 897 aa9.96□□□□□ -0.82
NIF3L1-208ENST00000436412 NFRKBQ6P4R8 1299 aa9.96□□□□□ -0.82
NIF3L1-208ENST00000436412 KIAA1211Q6ZU35 1233 aa9.96□□□□□ -0.82
NIF3L1-208ENST00000436412 STAG1Q8WVM7 1258 aa9.96□□□□□ -0.82
NIF3L1-208ENST00000436412 CEP95Q96GE4 821 aa9.96□□□□□ -0.82
NIF3L1-208ENST00000436412 CERS4Q9HA82 394 aa9.96□□□□□ -0.82
NIF3L1-208ENST00000436412 PDGFCQ9NRA1 345 aa9.96□□□□□ -0.82
NIF3L1-208ENST00000436412 ADD3Q9UEY8 706 aaKnown RBP9.96□□□□□ -0.82
NIF3L1-208ENST00000436412 SCN5AQ14524 2016 aa9.95□□□□□ -0.82
NIF3L1-208ENST00000436412 GSG1L2A8MUP6 293 aa9.95□□□□□ -0.82
NIF3L1-208ENST00000436412 MINDY4BA8MYZ0 360 aa9.95□□□□□ -0.82
NIF3L1-208ENST00000436412 LPXNO60711 386 aa9.95□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms