RNA–Protein interactions for RNA: ENST00000436324.5

HMGN1-207, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 2

Gene HMGN1, Length 1,045 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-207ENST00000436324 SLC28A3Q9HAS3 691 aa20.8■□□□□ 0.92
HMGN1-207ENST00000436324 KCNJ14Q9UNX9 436 aa20.8■□□□□ 0.92
HMGN1-207ENST00000436324 TRPC6Q9Y210 931 aa20.8■□□□□ 0.92
HMGN1-207ENST00000436324 PCDHA11Q9Y5I1 949 aa20.8■□□□□ 0.92
HMGN1-207ENST00000436324 TET1Q8NFU7 2136 aa20.8■□□□□ 0.92
HMGN1-207ENST00000436324 BACH1O14867 736 aa20.79■□□□□ 0.92
HMGN1-207ENST00000436324 DHX15O43143 795 aaKnown RBP20.79■□□□□ 0.92
HMGN1-207ENST00000436324 INSRRP14616 1297 aa20.79■□□□□ 0.92
HMGN1-207ENST00000436324 NEK4P51957 841 aa20.79■□□□□ 0.92
HMGN1-207ENST00000436324 WDR5P61964 334 aaKnown RBP20.79■□□□□ 0.92
HMGN1-207ENST00000436324 PLCB4Q15147 1175 aa20.79■□□□□ 0.92
HMGN1-207ENST00000436324 BLIDQ8IZY5 108 aa20.79■□□□□ 0.92
HMGN1-207ENST00000436324 SLC17A8Q8NDX2 589 aa20.79■□□□□ 0.92
HMGN1-207ENST00000436324 PHOSPHO2Q8TCD6 241 aa20.79■□□□□ 0.92
HMGN1-207ENST00000436324 PRDM12Q9H4Q4 367 aa20.79■□□□□ 0.92
HMGN1-207ENST00000436324 EDIL3O43854 480 aa20.78■□□□□ 0.92
HMGN1-207ENST00000436324 ATG7O95352 703 aa20.78■□□□□ 0.92
HMGN1-207ENST00000436324 CIITAP33076 1130 aa20.78■□□□□ 0.92
HMGN1-207ENST00000436324 DEFB103AP81534 67 aa20.78■□□□□ 0.92
HMGN1-207ENST00000436324 SETQ01105 290 aaPredicted RBP20.78■□□□□ 0.92
HMGN1-207ENST00000436324 IKBKEQ14164 716 aa20.78■□□□□ 0.92
HMGN1-207ENST00000436324 PPP2R2DQ66LE6 453 aa20.78■□□□□ 0.92
HMGN1-207ENST00000436324 ABHD15Q6UXT9 468 aa20.78■□□□□ 0.92
HMGN1-207ENST00000436324 HERC6Q8IVU3 1022 aa20.78■□□□□ 0.92
HMGN1-207ENST00000436324 DBF4BQ8NFT6 615 aa20.78■□□□□ 0.92
HMGN1-207ENST00000436324 TBCKQ8TEA7 893 aa20.78■□□□□ 0.92
HMGN1-207ENST00000436324 TRAPPC12Q8WVT3 735 aa20.78■□□□□ 0.92
HMGN1-207ENST00000436324 TUBE1Q9UJT0 475 aa20.78■□□□□ 0.92
HMGN1-207ENST00000436324 LARGE1O95461 756 aa20.77■□□□□ 0.92
HMGN1-207ENST00000436324 ME3Q16798 604 aa20.77■□□□□ 0.92
HMGN1-207ENST00000436324 MARCH8Q5T0T0 291 aa20.77■□□□□ 0.92
HMGN1-207ENST00000436324 SWSAP1Q6NVH7 229 aa20.77■□□□□ 0.92
HMGN1-207ENST00000436324 MIS18BP1Q6P0N0 1132 aa20.77■□□□□ 0.92
HMGN1-207ENST00000436324 PLPPR4Q7Z2D5 763 aa20.77■□□□□ 0.92
HMGN1-207ENST00000436324 MAFAQ8NHW3 353 aaPredicted RBP20.77■□□□□ 0.92
HMGN1-207ENST00000436324 DNAJB3Q8WWF6 145 aa20.77■□□□□ 0.92
HMGN1-207ENST00000436324 IL17RAQ96F46 866 aa20.77■□□□□ 0.92
HMGN1-207ENST00000436324 TBC1D22BQ9NU19 505 aa20.77■□□□□ 0.92
HMGN1-207ENST00000436324 TCEAL9Q9UHQ7 104 aa20.77■□□□□ 0.92
HMGN1-207ENST00000436324 ABHD14A-ACY1A0A1B0GW23 586 aa20.76■□□□□ 0.91
HMGN1-207ENST00000436324 POTEB3A0JP26 581 aa20.76■□□□□ 0.91
HMGN1-207ENST00000436324 RRN3P2A6NIE6 340 aa20.76■□□□□ 0.91
HMGN1-207ENST00000436324 KIF28PB7ZC32 967 aa20.76■□□□□ 0.91
HMGN1-207ENST00000436324 CAND2O75155 1236 aa20.76■□□□□ 0.91
HMGN1-207ENST00000436324 CTDNEP1O95476 244 aa20.76■□□□□ 0.91
HMGN1-207ENST00000436324 CA3P07451 260 aa20.76■□□□□ 0.91
HMGN1-207ENST00000436324 USP11P51784 963 aa20.76■□□□□ 0.91
HMGN1-207ENST00000436324 NPY5RQ15761 445 aa20.76■□□□□ 0.91
HMGN1-207ENST00000436324 FAM160B1Q5W0V3 765 aa20.76■□□□□ 0.91
HMGN1-207ENST00000436324 FAM117BQ6P1L5 589 aa20.76■□□□□ 0.91
HMGN1-207ENST00000436324 TAF2Q6P1X5 1199 aa20.76■□□□□ 0.91
HMGN1-207ENST00000436324 POTEBQ6S5H4 581 aa20.76■□□□□ 0.91
HMGN1-207ENST00000436324 TRMT1LQ7Z2T5 733 aaKnown RBP20.76■□□□□ 0.91
HMGN1-207ENST00000436324 CCDC60Q8IWA6 550 aaPredicted RBP20.76■□□□□ 0.91
HMGN1-207ENST00000436324 LENG9Q96B70 501 aa20.76■□□□□ 0.91
HMGN1-207ENST00000436324 ZBED2Q9BTP6 218 aa20.76■□□□□ 0.91
HMGN1-207ENST00000436324 FAM49AQ9H0Q0 323 aaPredicted RBP20.76■□□□□ 0.91
HMGN1-207ENST00000436324 ZNF302Q9NR11 478 aa20.76■□□□□ 0.91
HMGN1-207ENST00000436324 GJB4Q9NTQ9 266 aa20.76■□□□□ 0.91
HMGN1-207ENST00000436324 ORC3Q9UBD5 711 aaPredicted RBP20.76■□□□□ 0.91
HMGN1-207ENST00000436324 IGKV6D-21A0A0A0MT36 114 aa20.75■□□□□ 0.91
HMGN1-207ENST00000436324 MBLAC1A4D2B0 266 aaPredicted RBP20.75■□□□□ 0.91
HMGN1-207ENST00000436324 TLL1O43897 1013 aa20.75■□□□□ 0.91
HMGN1-207ENST00000436324 PLEKHG4Q58EX7 1191 aa20.75■□□□□ 0.91
HMGN1-207ENST00000436324 PDXDC2PQ6P474 469 aa20.75■□□□□ 0.91
HMGN1-207ENST00000436324 LIN28BQ6ZN17 250 aaKnown RBP eCLIP20.75■□□□□ 0.911e-8■■■□□ 16.2
HMGN1-207ENST00000436324 RSPH3Q86UC2 560 aa20.75■□□□□ 0.91
HMGN1-207ENST00000436324 DAGLBQ8NCG7 672 aa20.75■□□□□ 0.91
HMGN1-207ENST00000436324 SEPT8Q92599 483 aa20.75■□□□□ 0.91
HMGN1-207ENST00000436324 GJA10Q969M2 543 aa20.75■□□□□ 0.91
HMGN1-207ENST00000436324 GAS2L1Q99501 681 aaPredicted RBP20.75■□□□□ 0.91
HMGN1-207ENST00000436324 C22orf23Q9BZE7 217 aa20.75■□□□□ 0.91
HMGN1-207ENST00000436324 CERS4Q9HA82 394 aa20.75■□□□□ 0.91
HMGN1-207ENST00000436324 STK36Q9NRP7 1315 aa20.75■□□□□ 0.91
HMGN1-207ENST00000436324 M0R2N6 131 aa20.74■□□□□ 0.91
HMGN1-207ENST00000436324 MSH4O15457 936 aa20.74■□□□□ 0.91
HMGN1-207ENST00000436324 CHRNA1P02708 482 aa20.74■□□□□ 0.91
HMGN1-207ENST00000436324 FAM26DQ5JW98 314 aa20.74■□□□□ 0.91
HMGN1-207ENST00000436324 GALNT17Q6IS24 598 aa20.74■□□□□ 0.91
HMGN1-207ENST00000436324 ZNF746Q6NUN9 644 aaPredicted RBP20.74■□□□□ 0.91
HMGN1-207ENST00000436324 CKAP2LQ8IYA6 745 aa20.74■□□□□ 0.91
HMGN1-207ENST00000436324 TNPO1Q92973 898 aaKnown RBP20.74■□□□□ 0.91
HMGN1-207ENST00000436324 PHF20Q9BVI0 1012 aa20.74■□□□□ 0.91
HMGN1-207ENST00000436324 SAMM50Q9Y512 469 aa20.74■□□□□ 0.91
HMGN1-207ENST00000436324 EFCAB14O75071 495 aa20.73■□□□□ 0.91
HMGN1-207ENST00000436324 ARHGEF15O94989 841 aa20.73■□□□□ 0.91
HMGN1-207ENST00000436324 TDP2O95551 362 aa20.73■□□□□ 0.91
HMGN1-207ENST00000436324 GHRP10912 638 aa20.73■□□□□ 0.91
HMGN1-207ENST00000436324 XBP1P17861 261 aa20.73■□□□□ 0.91
HMGN1-207ENST00000436324 IGFBP4P22692 258 aa20.73■□□□□ 0.91
HMGN1-207ENST00000436324 FOSBP53539 338 aa20.73■□□□□ 0.91
HMGN1-207ENST00000436324 KRT76Q01546 638 aa20.73■□□□□ 0.91
HMGN1-207ENST00000436324 NONOQ15233 471 aaKnown RBP eCLIP20.73■□□□□ 0.91
HMGN1-207ENST00000436324 INF2Q27J81 1249 aa20.73■□□□□ 0.91
HMGN1-207ENST00000436324 C8orf34Q49A92 452 aa20.73■□□□□ 0.91
HMGN1-207ENST00000436324 GBF1Q92538 1859 aa20.73■□□□□ 0.91
HMGN1-207ENST00000436324 CHMP2AO43633 222 aa20.72■□□□□ 0.91
HMGN1-207ENST00000436324 HBP1O60381 514 aa20.72■□□□□ 0.91
HMGN1-207ENST00000436324 PSAPP07602 524 aa20.72■□□□□ 0.91
HMGN1-207ENST00000436324 ATP4AP20648 1035 aa20.72■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms