RNA–Protein interactions for RNA: ENST00000435747.2

CPNE1-214, Transcript of copine 1, humanhuman

TSL 3

Gene CPNE1, Length 400 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-214ENST00000435747 UBE3AQ05086 875 aa12.14□□□□□ -0.47
CPNE1-214ENST00000435747 LAMC2Q13753 1193 aa12.14□□□□□ -0.47
CPNE1-214ENST00000435747 CCDC96Q2M329 555 aa12.14□□□□□ -0.47
CPNE1-214ENST00000435747 PAN2Q504Q3 1202 aaKnown RBP12.14□□□□□ -0.47
CPNE1-214ENST00000435747 CES5AQ6NT32 575 aa12.14□□□□□ -0.47
CPNE1-214ENST00000435747 LLGL2Q6P1M3 1020 aa12.14□□□□□ -0.47
CPNE1-214ENST00000435747 GPR161Q8N6U8 529 aaKnown RBP12.14□□□□□ -0.47
CPNE1-214ENST00000435747 TDRD5Q8NAT2 981 aaKnown RBP12.14□□□□□ -0.47
CPNE1-214ENST00000435747 RTKNQ9BST9 563 aa12.14□□□□□ -0.47
CPNE1-214ENST00000435747 IL25Q9H293 177 aa12.14□□□□□ -0.47
CPNE1-214ENST00000435747 POMKQ9H5K3 350 aa12.14□□□□□ -0.47
CPNE1-214ENST00000435747 TCP11L1Q9NUJ3 509 aa12.14□□□□□ -0.47
CPNE1-214ENST00000435747 NCDNQ9UBB6 729 aa12.14□□□□□ -0.47
CPNE1-214ENST00000435747 LIMD1Q9UGP4 676 aa12.14□□□□□ -0.47
CPNE1-214ENST00000435747 FBXL21Q9UKT6 434 aa12.14□□□□□ -0.47
CPNE1-214ENST00000435747 MTMR7Q9Y216 660 aa12.14□□□□□ -0.47
CPNE1-214ENST00000435747 TSPY2A6NKD2 308 aa12.13□□□□□ -0.47
CPNE1-214ENST00000435747 STK25O00506 426 aa12.13□□□□□ -0.47
CPNE1-214ENST00000435747 ENPP3O14638 875 aa12.13□□□□□ -0.47
CPNE1-214ENST00000435747 COL9A3Q14050 684 aaPredicted RBP12.13□□□□□ -0.47
CPNE1-214ENST00000435747 PPP4R3BQ5MIZ7 849 aa12.13□□□□□ -0.47
CPNE1-214ENST00000435747 TBC1D10CQ8IV04 446 aa12.13□□□□□ -0.47
CPNE1-214ENST00000435747 ZDHHC14Q8IZN3 488 aa12.13□□□□□ -0.47
CPNE1-214ENST00000435747 ERVK-5Q9HDB9 667 aa12.13□□□□□ -0.47
CPNE1-214ENST00000435747 CDH22Q9UJ99 828 aa12.13□□□□□ -0.47
CPNE1-214ENST00000435747 DDX41Q9UJV9 622 aaKnown RBP12.13□□□□□ -0.47
CPNE1-214ENST00000435747 PNMA2Q9UL42 364 aa12.13□□□□□ -0.47
CPNE1-214ENST00000435747 TRIM6-TRIM34B2RNG4 842 aa12.12□□□□□ -0.47
CPNE1-214ENST00000435747 PPFIA4O75335 1185 aa12.12□□□□□ -0.47
CPNE1-214ENST00000435747 SMIM10L2AP0DMW4 78 aa12.12□□□□□ -0.47
CPNE1-214ENST00000435747 SMIM10L2BP0DMW5 78 aa12.12□□□□□ -0.47
CPNE1-214ENST00000435747 GHRP10912 638 aa12.12□□□□□ -0.47
CPNE1-214ENST00000435747 HOXD8P13378 290 aaPredicted RBP12.12□□□□□ -0.47
CPNE1-214ENST00000435747 GSPT1P15170 499 aaKnown RBP12.12□□□□□ -0.47
CPNE1-214ENST00000435747 RFX1P22670 979 aa12.12□□□□□ -0.47
CPNE1-214ENST00000435747 SLC16A2P36021 539 aa12.12□□□□□ -0.47
CPNE1-214ENST00000435747 LMNB2Q03252 620 aa12.12□□□□□ -0.47
CPNE1-214ENST00000435747 KCNC3Q14003 757 aa12.12□□□□□ -0.47
CPNE1-214ENST00000435747 STXBP2Q15833 593 aa12.12□□□□□ -0.47
CPNE1-214ENST00000435747 TPRNQ4KMQ1 711 aa12.12□□□□□ -0.47
CPNE1-214ENST00000435747 FAM26DQ5JW98 314 aa12.12□□□□□ -0.47
CPNE1-214ENST00000435747 SYDE2Q5VT97 1194 aa12.12□□□□□ -0.47
CPNE1-214ENST00000435747 PDE12Q6L8Q7 609 aaKnown RBP12.12□□□□□ -0.47
CPNE1-214ENST00000435747 SIX5Q8N196 739 aa12.12□□□□□ -0.47
CPNE1-214ENST00000435747 PLCD3Q8N3E9 789 aa12.12□□□□□ -0.47
CPNE1-214ENST00000435747 SUMF1Q8NBK3 374 aa12.12□□□□□ -0.47
CPNE1-214ENST00000435747 RILPL2Q969X0 211 aa12.12□□□□□ -0.47
CPNE1-214ENST00000435747 RNF216Q9NWF9 866 aaPredicted RBP12.12□□□□□ -0.47
CPNE1-214ENST00000435747 STX8Q9UNK0 236 aa12.12□□□□□ -0.47
CPNE1-214ENST00000435747 PCDHB12Q9Y5F1 795 aa12.12□□□□□ -0.47
CPNE1-214ENST00000435747 MRVI1Q9Y6F6 885 aa12.12□□□□□ -0.47
CPNE1-214ENST00000435747 FRYQ5TBA9 3013 aa12.12□□□□□ -0.47
CPNE1-214ENST00000435747 GCN1Q92616 2671 aaKnown RBP12.12□□□□□ -0.47
CPNE1-214ENST00000435747 ZZEF1O43149 2961 aa12.12□□□□□ -0.47
CPNE1-214ENST00000435747 RANBP6O60518 1105 aaKnown RBP12.11□□□□□ -0.47
CPNE1-214ENST00000435747 KINO60870 393 aaKnown RBP12.11□□□□□ -0.47
CPNE1-214ENST00000435747 SP9P0CG40 484 aa12.11□□□□□ -0.47
CPNE1-214ENST00000435747 SNHG28P0DPA3 235 aa12.11□□□□□ -0.47
CPNE1-214ENST00000435747 PCP11498 1178 aaKnown RBP12.11□□□□□ -0.47
CPNE1-214ENST00000435747 HOXC8P31273 242 aa12.11□□□□□ -0.47
CPNE1-214ENST00000435747 MTHFRP42898 656 aa12.11□□□□□ -0.47
CPNE1-214ENST00000435747 ITIH3Q06033 890 aa12.11□□□□□ -0.47
CPNE1-214ENST00000435747 VARS2Q5ST30 1063 aaKnown RBP12.11□□□□□ -0.47
CPNE1-214ENST00000435747 BTNL9Q6UXG8 535 aa12.11□□□□□ -0.47
CPNE1-214ENST00000435747 RASGRP4Q8TDF6 673 aa12.11□□□□□ -0.47
CPNE1-214ENST00000435747 TMEM47Q9BQJ4 181 aa12.11□□□□□ -0.47
CPNE1-214ENST00000435747 NEDD4P46934 1319 aa12.11□□□□□ -0.47
CPNE1-214ENST00000435747 MAST4O15021 2626 aa12.1□□□□□ -0.47
CPNE1-214ENST00000435747 SORBS3O60504 671 aa12.1□□□□□ -0.47
CPNE1-214ENST00000435747 GNAT1P11488 350 aa12.1□□□□□ -0.47
CPNE1-214ENST00000435747 ERVFC1P60507 584 aa12.1□□□□□ -0.47
CPNE1-214ENST00000435747 HAND2P61296 217 aa12.1□□□□□ -0.47
CPNE1-214ENST00000435747 SPOUT1Q5T280 376 aaKnown RBP12.1□□□□□ -0.47
CPNE1-214ENST00000435747 PLPP4Q5VZY2 271 aa12.1□□□□□ -0.47
CPNE1-214ENST00000435747 TTBK2Q6IQ55 1244 aa12.1□□□□□ -0.47
CPNE1-214ENST00000435747 CWC27Q6UX04 472 aaKnown RBP12.1□□□□□ -0.47
CPNE1-214ENST00000435747 NPAS4Q8IUM7 802 aa12.1□□□□□ -0.47
CPNE1-214ENST00000435747 NSUN6Q8TEA1 469 aaKnown RBP12.1□□□□□ -0.47
CPNE1-214ENST00000435747 DCAF4Q8WV16 495 aa12.1□□□□□ -0.47
CPNE1-214ENST00000435747 CASP10Q92851 521 aa12.1□□□□□ -0.47
CPNE1-214ENST00000435747 SECISBP2LQ93073 1101 aaKnown RBP12.1□□□□□ -0.47
CPNE1-214ENST00000435747 SPATA33Q96N06 139 aa12.1□□□□□ -0.47
CPNE1-214ENST00000435747 ADAM7Q9H2U9 754 aa12.1□□□□□ -0.47
CPNE1-214ENST00000435747 RNPEPQ9H4A4 650 aa12.1□□□□□ -0.47
CPNE1-214ENST00000435747 IGF2RP11717 2491 aa12.1□□□□□ -0.47
CPNE1-214ENST00000435747 H3BRB1 525 aa12.09□□□□□ -0.47
CPNE1-214ENST00000435747 FSCN2O14926 492 aa12.09□□□□□ -0.47
CPNE1-214ENST00000435747 CHRNA1P02708 482 aa12.09□□□□□ -0.47
CPNE1-214ENST00000435747 STAG3L1P0CL83 205 aa12.09□□□□□ -0.47
CPNE1-214ENST00000435747 TOP1P11387 765 aaKnown RBP12.09□□□□□ -0.47
CPNE1-214ENST00000435747 TDGQ13569 410 aa12.09□□□□□ -0.47
CPNE1-214ENST00000435747 HSDL1Q3SXM5 330 aa12.09□□□□□ -0.47
CPNE1-214ENST00000435747 PPM1JQ5JR12 505 aa12.09□□□□□ -0.47
CPNE1-214ENST00000435747 TTC22Q5TAA0 569 aa12.09□□□□□ -0.47
CPNE1-214ENST00000435747 TTC14Q96N46 770 aa12.09□□□□□ -0.47
CPNE1-214ENST00000435747 IWS1Q96ST2 819 aa12.09□□□□□ -0.47
CPNE1-214ENST00000435747 C16orf70Q9BSU1 422 aa12.09□□□□□ -0.47
CPNE1-214ENST00000435747 DSCC1Q9BVC3 393 aa12.09□□□□□ -0.47
CPNE1-214ENST00000435747 TUT1Q9H6E5 874 aaKnown RBP12.09□□□□□ -0.47
CPNE1-214ENST00000435747 AAASQ9NRG9 546 aa12.09□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms