RNA–Protein interactions for RNA: ENST00000435607.3

SCN4A-201, Transcript of sodium voltage-gated channel alpha subunit 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCN4A, Length 7,805 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN4A-201ENST00000435607 TNKSO95271 1327 aa12.03□□□□□ -0.48
SCN4A-201ENST00000435607 IQANK1A0A1B0GTG1 560 aa12.02□□□□□ -0.48
SCN4A-201ENST00000435607 ARHGAP10A1A4S6 786 aa12.02□□□□□ -0.48
SCN4A-201ENST00000435607 NBPF26B4DH59 902 aa12.02□□□□□ -0.48
SCN4A-201ENST00000435607 MARK3P27448 753 aa12.02□□□□□ -0.48
SCN4A-201ENST00000435607 ATICP31939 592 aa12.02□□□□□ -0.48
SCN4A-201ENST00000435607 ZNF75DP51815 510 aa12.02□□□□□ -0.48
SCN4A-201ENST00000435607 TOGARAM2Q6ZUX3 1019 aa12.02□□□□□ -0.48
SCN4A-201ENST00000435607 SDR42E1Q8WUS8 393 aa12.02□□□□□ -0.48
SCN4A-201ENST00000435607 PARVGQ9HBI0 331 aa12.02□□□□□ -0.48
SCN4A-201ENST00000435607 MYO3BQ8WXR4 1341 aa12.02□□□□□ -0.48
SCN4A-201ENST00000435607 RAD17O75943 681 aa12.02□□□□□ -0.48
SCN4A-201ENST00000435607 HLA-DPA1P20036 260 aa12.02□□□□□ -0.48
SCN4A-201ENST00000435607 KCNA1Q09470 495 aa12.02□□□□□ -0.48
SCN4A-201ENST00000435607 CCDC184Q52MB2 194 aa12.02□□□□□ -0.48
SCN4A-201ENST00000435607 RASIP1Q5U651 963 aa12.02□□□□□ -0.48
SCN4A-201ENST00000435607 SCYL3Q8IZE3 742 aa12.02□□□□□ -0.48
SCN4A-201ENST00000435607 LARP4BQ92615 738 aaKnown RBP12.02□□□□□ -0.48
SCN4A-201ENST00000435607 ZFP42Q96MM3 310 aa12.02□□□□□ -0.48
SCN4A-201ENST00000435607 MSTO1Q9BUK6 570 aa12.02□□□□□ -0.48
SCN4A-201ENST00000435607 COPRSQ9NQ92 184 aa12.02□□□□□ -0.48
SCN4A-201ENST00000435607 DNAJC17Q9NVM6 304 aaKnown RBP12.02□□□□□ -0.48
SCN4A-201ENST00000435607 TRAPPC10P48553 1259 aa12.02□□□□□ -0.48
SCN4A-201ENST00000435607 JAK3P52333 1124 aa12.02□□□□□ -0.48
SCN4A-201ENST00000435607 TTC8Q8TAM2 541 aa12.02□□□□□ -0.48
SCN4A-201ENST00000435607 FAM227BQ96M60 508 aa12.02□□□□□ -0.48
SCN4A-201ENST00000435607 KLC2Q9H0B6 622 aa12.02□□□□□ -0.48
SCN4A-201ENST00000435607 SCOCQ9UIL1 159 aa12.02□□□□□ -0.48
SCN4A-201ENST00000435607 PI4K2BG5E9Z4 385 aa12.02□□□□□ -0.49
SCN4A-201ENST00000435607 OSTNP61366 133 aa12.02□□□□□ -0.49
SCN4A-201ENST00000435607 GPIHBP1Q8IV16 184 aa12.02□□□□□ -0.49
SCN4A-201ENST00000435607 TAGAPQ8N103 731 aa12.02□□□□□ -0.49
SCN4A-201ENST00000435607 TTC39CQ8N584 583 aa12.02□□□□□ -0.49
SCN4A-201ENST00000435607 SUCLG2Q96I99 432 aa12.02□□□□□ -0.49
SCN4A-201ENST00000435607 HINFPQ9BQA5 517 aa12.02□□□□□ -0.49
SCN4A-201ENST00000435607 SCINQ9Y6U3 715 aa12.02□□□□□ -0.49
SCN4A-201ENST00000435607 LOC102724428A0A0B4J2F2 783 aa12.02□□□□□ -0.49
SCN4A-201ENST00000435607 SIK1P57059 783 aa12.02□□□□□ -0.49
SCN4A-201ENST00000435607 PHKG1Q16816 387 aa12.02□□□□□ -0.49
SCN4A-201ENST00000435607 DCAF4L1Q3SXM0 396 aa12.02□□□□□ -0.49
SCN4A-201ENST00000435607 MMS22LQ6ZRQ5 1243 aa12.02□□□□□ -0.49
SCN4A-201ENST00000435607 LCA5Q86VQ0 697 aa12.02□□□□□ -0.49
SCN4A-201ENST00000435607 GIMAP4Q9NUV9 329 aa12.02□□□□□ -0.49
SCN4A-201ENST00000435607 EDC4Q6P2E9 1401 aaKnown RBP12.02□□□□□ -0.49
SCN4A-201ENST00000435607 SF3A3Q12874 501 aaKnown RBP eCLIP12.02□□□□□ -0.49
SCN4A-201ENST00000435607 PNOCQ13519 176 aa12.02□□□□□ -0.49
SCN4A-201ENST00000435607 ZNF667Q5HYK9 610 aa12.02□□□□□ -0.49
SCN4A-201ENST00000435607 EHD2Q9NZN4 543 aa12.02□□□□□ -0.49
SCN4A-201ENST00000435607 ATF5Q9Y2D1 282 aaPredicted RBP12.02□□□□□ -0.49
SCN4A-201ENST00000435607 SYCE1LA8MT33 242 aa12.02□□□□□ -0.49
SCN4A-201ENST00000435607 ARIH2O95376 493 aa12.02□□□□□ -0.49
SCN4A-201ENST00000435607 ECEL1O95672 775 aa12.02□□□□□ -0.49
SCN4A-201ENST00000435607 TTLL4Q14679 1199 aa12.02□□□□□ -0.49
SCN4A-201ENST00000435607 POLR3AO14802 1390 aaPredicted RBP12.01□□□□□ -0.49
SCN4A-201ENST00000435607 TRAPPC3O43617 180 aa12.01□□□□□ -0.49
SCN4A-201ENST00000435607 GOLGA8HP0CJ92 632 aa12.01□□□□□ -0.49
SCN4A-201ENST00000435607 DYNLT1P63172 113 aa12.01□□□□□ -0.49
SCN4A-201ENST00000435607 BTBD8Q5XKL5 378 aa12.01□□□□□ -0.49
SCN4A-201ENST00000435607 ARMC6Q6NXE6 501 aa12.01□□□□□ -0.49
SCN4A-201ENST00000435607 DDX53Q86TM3 631 aaKnown RBP12.01□□□□□ -0.49
SCN4A-201ENST00000435607 HAUS4Q9H6D7 363 aa12.01□□□□□ -0.49
SCN4A-201ENST00000435607 KLHL8Q9P2G9 620 aaPredicted RBP12.01□□□□□ -0.49
SCN4A-201ENST00000435607 NFKBIL1Q9UBC1 381 aaPredicted RBP12.01□□□□□ -0.49
SCN4A-201ENST00000435607 MAP3K7CLP57077 242 aa12.01□□□□□ -0.49
SCN4A-201ENST00000435607 LBRQ14739 615 aaKnown RBP12.01□□□□□ -0.49
SCN4A-201ENST00000435607 TRIM60Q495X7 471 aa12.01□□□□□ -0.49
SCN4A-201ENST00000435607 KCTD1Q719H9 257 aa12.01□□□□□ -0.49
SCN4A-201ENST00000435607 WDR48Q8TAF3 677 aa12.01□□□□□ -0.49
SCN4A-201ENST00000435607 EXT2Q93063 718 aa12.01□□□□□ -0.49
SCN4A-201ENST00000435607 LSM7Q9UK45 103 aaKnown RBP12.01□□□□□ -0.49
SCN4A-201ENST00000435607 GSNP06396 782 aa12.01□□□□□ -0.49
SCN4A-201ENST00000435607 SMARCA1P28370 1054 aa12.01□□□□□ -0.49
SCN4A-201ENST00000435607 STXBP2Q15833 593 aa12.01□□□□□ -0.49
SCN4A-201ENST00000435607 SP110Q9HB58 689 aa12.01□□□□□ -0.49
SCN4A-201ENST00000435607 INTS9Q9NV88 658 aaKnown RBP12.01□□□□□ -0.49
SCN4A-201ENST00000435607 PCDHB15Q9Y5E8 787 aa12.01□□□□□ -0.49
SCN4A-201ENST00000435607 SNX14Q9Y5W7 946 aa12.01□□□□□ -0.49
SCN4A-201ENST00000435607 ERBB4Q15303 1308 aa12.01□□□□□ -0.49
SCN4A-201ENST00000435607 ERICH1Q86X53 443 aa12.01□□□□□ -0.49
SCN4A-201ENST00000435607 KIAA1586Q9HCI6 787 aa12.01□□□□□ -0.49
SCN4A-201ENST00000435607 NCF2P19878 526 aaPredicted RBP12.01□□□□□ -0.49
SCN4A-201ENST00000435607 USPL1Q5W0Q7 1092 aa12.01□□□□□ -0.49
SCN4A-201ENST00000435607 GPKOWQ92917 476 aaPredicted RBP eCLIP12.01□□□□□ -0.49
SCN4A-201ENST00000435607 GOLGA8JA6NMD2 632 aa12.01□□□□□ -0.49
SCN4A-201ENST00000435607 NEURL1BA8MQ27 555 aa12.01□□□□□ -0.49
SCN4A-201ENST00000435607 ARHGEF25Q86VW2 580 aa12.01□□□□□ -0.49
SCN4A-201ENST00000435607 TRMT44Q8IYL2 757 aaKnown RBP12.01□□□□□ -0.49
SCN4A-201ENST00000435607 FAM129AQ9BZQ8 928 aa12.01□□□□□ -0.49
SCN4A-201ENST00000435607 DAAM1Q9Y4D1 1078 aa12.01□□□□□ -0.49
SCN4A-201ENST00000435607 PCCAP05165 728 aaPredicted RBP12□□□□□ -0.49
SCN4A-201ENST00000435607 HADHAP40939 763 aa12□□□□□ -0.49
SCN4A-201ENST00000435607 PTGDRQ13258 359 aa12□□□□□ -0.49
SCN4A-201ENST00000435607 KYAT1Q16773 422 aa12□□□□□ -0.49
SCN4A-201ENST00000435607 ZMAT2Q96NC0 199 aaKnown RBP12□□□□□ -0.49
SCN4A-201ENST00000435607 DBNDD1Q9H9R9 158 aa12□□□□□ -0.49
SCN4A-201ENST00000435607 CBX8Q9HC52 389 aa12□□□□□ -0.49
SCN4A-201ENST00000435607 ABCC10Q5T3U5 1492 aa12□□□□□ -0.49
SCN4A-201ENST00000435607 EFCAB8A8MWE9 144 aa12□□□□□ -0.49
SCN4A-201ENST00000435607 SGSM2O43147 1006 aa12□□□□□ -0.49
SCN4A-201ENST00000435607 MAP4P27816 1152 aaKnown RBP12□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms