RNA–Protein interactions for RNA: ENST00000435432.6

NEDD4L-207, Transcript of neural precursor cell expressed, developmentally down-regulated 4-like, E3 ubiquitin protein ligase, humanhuman

TSL 1 (best) BASIC

Gene NEDD4L, Length 3,417 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4L-207ENST00000435432 UQCC2Q9BRT2 126 aa8.7□□□□□ -1.02
NEDD4L-207ENST00000435432 UPF2Q9HAU5 1272 aaKnown RBP8.7□□□□□ -1.02
NEDD4L-207ENST00000435432 CREBZFQ9NS37 354 aa8.7□□□□□ -1.02
NEDD4L-207ENST00000435432 KIAA1257Q9ULG3 409 aa8.7□□□□□ -1.02
NEDD4L-207ENST00000435432 PCDHB3Q9Y5E6 796 aa8.7□□□□□ -1.02
NEDD4L-207ENST00000435432 SBF2Q86WG5 1849 aa8.7□□□□□ -1.02
NEDD4L-207ENST00000435432 CEMIPQ8WUJ3 1361 aa8.7□□□□□ -1.02
NEDD4L-207ENST00000435432 M0R3H8 397 aa8.7□□□□□ -1.02
NEDD4L-207ENST00000435432 SLFN14P0C7P3 912 aa8.7□□□□□ -1.02
NEDD4L-207ENST00000435432 SMTNP53814 917 aa8.7□□□□□ -1.02
NEDD4L-207ENST00000435432 TPD52P55327 224 aaPredicted RBP8.7□□□□□ -1.02
NEDD4L-207ENST00000435432 HIC1Q14526 733 aa8.7□□□□□ -1.02
NEDD4L-207ENST00000435432 NUP54Q7Z3B4 507 aa8.7□□□□□ -1.02
NEDD4L-207ENST00000435432 FBXO27Q8NI29 283 aa8.7□□□□□ -1.02
NEDD4L-207ENST00000435432 KCTD13Q8WZ19 329 aa8.7□□□□□ -1.02
NEDD4L-207ENST00000435432 CFAP36Q96G28 342 aa8.7□□□□□ -1.02
NEDD4L-207ENST00000435432 APOL5Q9BWW9 433 aa8.7□□□□□ -1.02
NEDD4L-207ENST00000435432 CYLDQ9NQC7 956 aa8.7□□□□□ -1.02
NEDD4L-207ENST00000435432 WDR90Q96KV7 1748 aa8.69□□□□□ -1.02
NEDD4L-207ENST00000435432 USP17L3A6NCW0 530 aa8.69□□□□□ -1.02
NEDD4L-207ENST00000435432 USP17L4A6NCW7 530 aa8.69□□□□□ -1.02
NEDD4L-207ENST00000435432 CASQ2O14958 399 aaPredicted RBP8.69□□□□□ -1.02
NEDD4L-207ENST00000435432 RIPK2O43353 540 aa8.69□□□□□ -1.02
NEDD4L-207ENST00000435432 PRELPP51888 382 aa8.69□□□□□ -1.02
NEDD4L-207ENST00000435432 EXOSC9Q06265 439 aaKnown RBP8.69□□□□□ -1.02
NEDD4L-207ENST00000435432 SLC14A2Q15849 920 aa8.69□□□□□ -1.02
NEDD4L-207ENST00000435432 USP17L2Q6R6M4 530 aa8.69□□□□□ -1.02
NEDD4L-207ENST00000435432 USP17L1Q7RTZ2 530 aa8.69□□□□□ -1.02
NEDD4L-207ENST00000435432 ZSCAN29Q8IWY8 852 aaPredicted RBP8.69□□□□□ -1.02
NEDD4L-207ENST00000435432 BBOF1Q8ND07 529 aa8.69□□□□□ -1.02
NEDD4L-207ENST00000435432 FNIP1Q8TF40 1166 aa8.69□□□□□ -1.02
NEDD4L-207ENST00000435432 FSD1Q9BTV5 496 aa8.69□□□□□ -1.02
NEDD4L-207ENST00000435432 WDR35Q9P2L0 1181 aa8.69□□□□□ -1.02
NEDD4L-207ENST00000435432 MRC1P22897 1456 aa8.69□□□□□ -1.02
NEDD4L-207ENST00000435432 ZW10O43264 779 aa8.69□□□□□ -1.02
NEDD4L-207ENST00000435432 SSBP05455 408 aaKnown RBP eCLIP8.69□□□□□ -1.02
NEDD4L-207ENST00000435432 SFTPCP11686 197 aa8.69□□□□□ -1.02
NEDD4L-207ENST00000435432 PLTPP55058 493 aa8.69□□□□□ -1.02
NEDD4L-207ENST00000435432 PPP1R7Q15435 360 aa8.69□□□□□ -1.02
NEDD4L-207ENST00000435432 CEP97Q8IW35 865 aa8.69□□□□□ -1.02
NEDD4L-207ENST00000435432 SERBP1Q8NC51 408 aaKnown RBP eCLIP8.69□□□□□ -1.02
NEDD4L-207ENST00000435432 OR6C4Q8NGE1 309 aa8.69□□□□□ -1.02
NEDD4L-207ENST00000435432 SPATA18Q8TC71 538 aa8.69□□□□□ -1.02
NEDD4L-207ENST00000435432 MIEF2Q96C03 454 aa8.69□□□□□ -1.02
NEDD4L-207ENST00000435432 THUMPD2Q9BTF0 503 aaKnown RBP8.69□□□□□ -1.02
NEDD4L-207ENST00000435432 EDEM3Q9BZQ6 932 aa8.69□□□□□ -1.02
NEDD4L-207ENST00000435432 FAM221AA4D161 298 aa8.68□□□□□ -1.02
NEDD4L-207ENST00000435432 EIF3CLB5ME19 914 aaKnown RBP8.68□□□□□ -1.02
NEDD4L-207ENST00000435432 HTR3AP46098 478 aa8.68□□□□□ -1.02
NEDD4L-207ENST00000435432 SSPNQ14714 243 aa8.68□□□□□ -1.02
NEDD4L-207ENST00000435432 NAA25Q14CX7 972 aa8.68□□□□□ -1.02
NEDD4L-207ENST00000435432 CCDC183Q5T5S1 534 aa8.68□□□□□ -1.02
NEDD4L-207ENST00000435432 TMC4Q7Z404 712 aa8.68□□□□□ -1.02
NEDD4L-207ENST00000435432 CCDC170Q8IYT3 715 aa8.68□□□□□ -1.02
NEDD4L-207ENST00000435432 CMTM3Q96MX0 182 aa8.68□□□□□ -1.02
NEDD4L-207ENST00000435432 EIF3CQ99613 913 aaKnown RBP8.68□□□□□ -1.02
NEDD4L-207ENST00000435432 VCX3BQ9H321 246 aa8.68□□□□□ -1.02
NEDD4L-207ENST00000435432 CDC23Q9UJX2 597 aa8.68□□□□□ -1.02
NEDD4L-207ENST00000435432 PTBP2Q9UKA9 531 aaKnown RBP8.68□□□□□ -1.02
NEDD4L-207ENST00000435432 TRAV6A0A075B6T7 132 aa8.68□□□□□ -1.02
NEDD4L-207ENST00000435432 LZTS3O60299 673 aaPredicted RBP8.68□□□□□ -1.02
NEDD4L-207ENST00000435432 ADAMTS2O95450 1211 aa8.68□□□□□ -1.02
NEDD4L-207ENST00000435432 CPP00450 1065 aa8.68□□□□□ -1.02
NEDD4L-207ENST00000435432 NPPAP01160 153 aa8.68□□□□□ -1.02
NEDD4L-207ENST00000435432 POTEIP0CG38 1075 aa8.68□□□□□ -1.02
NEDD4L-207ENST00000435432 NLRP5P59047 1200 aa8.68□□□□□ -1.02
NEDD4L-207ENST00000435432 MFSD10Q14728 455 aa8.68□□□□□ -1.02
NEDD4L-207ENST00000435432 TNIP1Q15025 636 aa8.68□□□□□ -1.02
NEDD4L-207ENST00000435432 IGSF11Q5DX21 431 aa8.68□□□□□ -1.02
NEDD4L-207ENST00000435432 CCDC144CPQ8IYA2 1237 aa8.68□□□□□ -1.02
NEDD4L-207ENST00000435432 ZNF280CQ8ND82 737 aa8.68□□□□□ -1.02
NEDD4L-207ENST00000435432 IL17REQ8NFR9 667 aa8.68□□□□□ -1.02
NEDD4L-207ENST00000435432 RASSF8Q8NHQ8 419 aa8.68□□□□□ -1.02
NEDD4L-207ENST00000435432 RNF139Q8WU17 664 aa8.68□□□□□ -1.02
NEDD4L-207ENST00000435432 SHC3Q92529 594 aa8.68□□□□□ -1.02
NEDD4L-207ENST00000435432 PPP1R14BQ96C90 147 aa8.68□□□□□ -1.02
NEDD4L-207ENST00000435432 NACAP1Q9BZK3 213 aa8.68□□□□□ -1.02
NEDD4L-207ENST00000435432 TMEM260Q9NX78 707 aa8.68□□□□□ -1.02
NEDD4L-207ENST00000435432 ADAMTS1Q9UHI8 967 aa8.68□□□□□ -1.02
NEDD4L-207ENST00000435432 MTF2Q9Y483 593 aaPredicted RBP8.68□□□□□ -1.02
NEDD4L-207ENST00000435432 KDM6AO15550 1401 aaPredicted RBP8.68□□□□□ -1.02
NEDD4L-207ENST00000435432 SOS1Q07889 1333 aaPredicted RBP8.68□□□□□ -1.02
NEDD4L-207ENST00000435432 SLC7A4O43246 635 aa8.68□□□□□ -1.02
NEDD4L-207ENST00000435432 HOXC11O43248 304 aaPredicted RBP8.68□□□□□ -1.02
NEDD4L-207ENST00000435432 KLF4O43474 513 aa8.68□□□□□ -1.02
NEDD4L-207ENST00000435432 HSPA8P11142 646 aaKnown RBP8.68□□□□□ -1.02
NEDD4L-207ENST00000435432 HAAOP46952 286 aa8.68□□□□□ -1.02
NEDD4L-207ENST00000435432 NRLP54845 237 aa8.68□□□□□ -1.02
NEDD4L-207ENST00000435432 RAB33AQ14088 237 aa8.68□□□□□ -1.02
NEDD4L-207ENST00000435432 BTG3Q14201 252 aaPredicted RBP8.68□□□□□ -1.02
NEDD4L-207ENST00000435432 NOLC1Q14978 699 aaKnown RBP eCLIP8.68□□□□□ -1.02
NEDD4L-207ENST00000435432 MTERF2Q49AM1 385 aa8.68□□□□□ -1.02
NEDD4L-207ENST00000435432 LUZP1Q86V48 1076 aa8.68□□□□□ -1.02
NEDD4L-207ENST00000435432 NKAPQ8N5F7 415 aaKnown RBP8.68□□□□□ -1.02
NEDD4L-207ENST00000435432 ERMNQ8TAM6 284 aa8.68□□□□□ -1.02
NEDD4L-207ENST00000435432 FAM76AQ8TAV0 307 aa8.68□□□□□ -1.02
NEDD4L-207ENST00000435432 SLC35B4Q969S0 331 aa8.68□□□□□ -1.02
NEDD4L-207ENST00000435432 NSRP1Q9H0G5 558 aaKnown RBP8.68□□□□□ -1.02
NEDD4L-207ENST00000435432 CYP4F11Q9HBI6 524 aa8.68□□□□□ -1.02
NEDD4L-207ENST00000435432 METTL5Q9NRN9 209 aaKnown RBP8.68□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms