RNA–Protein interactions for RNA: ENST00000434813.3

CLK1-205, Transcript of CDC like kinase 1, humanhuman

TSL 2 BASIC

Gene CLK1, Length 2,026 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-205ENST00000434813 RRP1BQ14684 758 aaKnown RBP20.49■□□□□ 0.87
CLK1-205ENST00000434813 CASP8Q14790 479 aa20.49■□□□□ 0.87
CLK1-205ENST00000434813 SFMBT2Q5VUG0 894 aa20.49■□□□□ 0.87
CLK1-205ENST00000434813 EPM2AIP1Q7L775 607 aaPredicted RBP20.49■□□□□ 0.87
CLK1-205ENST00000434813 HERC5Q9UII4 1024 aaKnown RBP20.49■□□□□ 0.87
CLK1-205ENST00000434813 PRR12Q9ULL5 1215 aa20.49■□□□□ 0.87
CLK1-205ENST00000434813 PDE2AO00408 941 aaPredicted RBP20.48■□□□□ 0.87
CLK1-205ENST00000434813 ZNF185O15231 689 aa20.48■□□□□ 0.87
CLK1-205ENST00000434813 TLR2O60603 784 aa20.48■□□□□ 0.87
CLK1-205ENST00000434813 MOCS3O95396 460 aa20.48■□□□□ 0.87
CLK1-205ENST00000434813 CASP5P51878 434 aa20.48■□□□□ 0.87
CLK1-205ENST00000434813 ITIH3Q06033 890 aa20.48■□□□□ 0.87
CLK1-205ENST00000434813 GFPT1Q06210 699 aaPredicted RBP20.48■□□□□ 0.87
CLK1-205ENST00000434813 PABPC4Q13310 644 aaKnown RBP eCLIP20.48■□□□□ 0.87
CLK1-205ENST00000434813 TDRD12Q587J7 1177 aaKnown RBP20.48■□□□□ 0.87
CLK1-205ENST00000434813 DALRD3Q5D0E6 543 aaKnown RBP20.48■□□□□ 0.87
CLK1-205ENST00000434813 NIM1KQ8IY84 436 aa20.48■□□□□ 0.87
CLK1-205ENST00000434813 OGFOD1Q8N543 542 aa20.48■□□□□ 0.87
CLK1-205ENST00000434813 KCTD17Q8N5Z5 321 aa20.48■□□□□ 0.87
CLK1-205ENST00000434813 PRMT6Q96LA8 375 aaPredicted RBP20.48■□□□□ 0.87
CLK1-205ENST00000434813 ZHX3Q9H4I2 956 aa20.48■□□□□ 0.87
CLK1-205ENST00000434813 PDE11AQ9HCR9 933 aa20.48■□□□□ 0.87
CLK1-205ENST00000434813 NLRC4Q9NPP4 1024 aa20.48■□□□□ 0.87
CLK1-205ENST00000434813 ZKSCAN7Q9P0L1 754 aaPredicted RBP20.48■□□□□ 0.87
CLK1-205ENST00000434813 HDAC9Q9UKV0 1011 aa20.48■□□□□ 0.87
CLK1-205ENST00000434813 KIF13BQ9NQT8 1826 aa20.48■□□□□ 0.87
CLK1-205ENST00000434813 NR2F2P24468 414 aa20.48■□□□□ 0.87
CLK1-205ENST00000434813 SFR1Q86XK3 245 aa20.48■□□□□ 0.87
CLK1-205ENST00000434813 PKNOX2Q96KN3 472 aa20.48■□□□□ 0.87
CLK1-205ENST00000434813 POLR3CQ9BUI4 534 aaPredicted RBP20.48■□□□□ 0.87
CLK1-205ENST00000434813 ZCCHC17Q9NP64 241 aaKnown RBP20.48■□□□□ 0.87
CLK1-205ENST00000434813 MEIS1O00470 390 aa20.47■□□□□ 0.87
CLK1-205ENST00000434813 TAL1P17542 331 aaPredicted RBP20.47■□□□□ 0.87
CLK1-205ENST00000434813 HOXA13P31271 388 aaPredicted RBP20.47■□□□□ 0.87
CLK1-205ENST00000434813 POLR2FP61218 127 aaKnown RBP20.47■□□□□ 0.87
CLK1-205ENST00000434813 TRAF1Q13077 416 aa20.47■□□□□ 0.87
CLK1-205ENST00000434813 KNOP1Q1ED39 458 aaKnown RBP20.47■□□□□ 0.87
CLK1-205ENST00000434813 BMT2Q1RMZ1 405 aa20.47■□□□□ 0.87
CLK1-205ENST00000434813 MAP9Q49MG5 647 aa20.47■□□□□ 0.87
CLK1-205ENST00000434813 CREG2Q8IUH2 290 aa20.47■□□□□ 0.87
CLK1-205ENST00000434813 RNF216Q9NWF9 866 aaPredicted RBP20.47■□□□□ 0.87
CLK1-205ENST00000434813 HYOU1Q9Y4L1 999 aa20.47■□□□□ 0.87
CLK1-205ENST00000434813 VIL1P09327 827 aaKnown RBP20.46■□□□□ 0.87
CLK1-205ENST00000434813 TCP1P17987 556 aaKnown RBP20.46■□□□□ 0.87
CLK1-205ENST00000434813 FRMD5Q7Z6J6 570 aa20.46■□□□□ 0.87
CLK1-205ENST00000434813 RNF10Q8N5U6 811 aaKnown RBP20.46■□□□□ 0.87
CLK1-205ENST00000434813 GANQ9H2C0 597 aa20.46■□□□□ 0.87
CLK1-205ENST00000434813 TMOD2Q9NZR1 351 aa20.46■□□□□ 0.87
CLK1-205ENST00000434813 SRCAPQ6ZRS2 3230 aa20.46■□□□□ 0.87
CLK1-205ENST00000434813 IGLV3-22A0A075B6J6 115 aa20.46■□□□□ 0.87
CLK1-205ENST00000434813 PDXKO00764 312 aa20.46■□□□□ 0.87
CLK1-205ENST00000434813 EPS15P42566 896 aa20.46■□□□□ 0.87
CLK1-205ENST00000434813 PTGER2P43116 358 aa20.46■□□□□ 0.87
CLK1-205ENST00000434813 STAT2P52630 851 aa20.46■□□□□ 0.87
CLK1-205ENST00000434813 GPIHBP1Q8IV16 184 aa20.46■□□□□ 0.87
CLK1-205ENST00000434813 VIPAS39Q9H9C1 493 aa20.46■□□□□ 0.87
CLK1-205ENST00000434813 ARHGEF10LQ9HCE6 1279 aa20.46■□□□□ 0.87
CLK1-205ENST00000434813 LUC7LQ9NQ29 371 aaKnown RBP20.46■□□□□ 0.87
CLK1-205ENST00000434813 ZNRF3Q9ULT6 936 aa20.46■□□□□ 0.87
CLK1-205ENST00000434813 EYA4O95677 639 aa20.45■□□□□ 0.86
CLK1-205ENST00000434813 KCNH2Q12809 1159 aa20.45■□□□□ 0.86
CLK1-205ENST00000434813 SPICE1Q8N0Z3 855 aa20.45■□□□□ 0.86
CLK1-205ENST00000434813 MMGT1Q8N4V1 131 aa20.45■□□□□ 0.86
CLK1-205ENST00000434813 NOX5Q96PH1 765 aa20.45■□□□□ 0.86
CLK1-205ENST00000434813 OSBPL9Q96SU4 736 aa20.45■□□□□ 0.86
CLK1-205ENST00000434813 EIF2AK1Q9BQI3 630 aaKnown RBP20.45■□□□□ 0.86
CLK1-205ENST00000434813 CRACR2AQ9BSW2 395 aa20.45■□□□□ 0.86
CLK1-205ENST00000434813 ACBD3Q9H3P7 528 aa20.45■□□□□ 0.86
CLK1-205ENST00000434813 XPO5Q9HAV4 1204 aaKnown RBP eCLIP20.45■□□□□ 0.86
CLK1-205ENST00000434813 AIPL1Q9NZN9 384 aa20.45■□□□□ 0.86
CLK1-205ENST00000434813 SALL4Q9UJQ4 1053 aa20.45■□□□□ 0.86
CLK1-205ENST00000434813 RBBP6Q7Z6E9 1792 aaKnown RBP20.45■□□□□ 0.86
CLK1-205ENST00000434813 CALUO43852 315 aaPredicted RBP20.44■□□□□ 0.86
CLK1-205ENST00000434813 HOXD13P35453 343 aa20.44■□□□□ 0.86
CLK1-205ENST00000434813 ZNF76P36508 570 aa20.44■□□□□ 0.86
CLK1-205ENST00000434813 RASSF7Q02833 373 aa20.44■□□□□ 0.86
CLK1-205ENST00000434813 CYP2W1Q8TAV3 490 aa20.44■□□□□ 0.86
CLK1-205ENST00000434813 RUBCNQ92622 972 aa20.44■□□□□ 0.86
CLK1-205ENST00000434813 SGIP1Q9BQI5 828 aa20.44■□□□□ 0.86
CLK1-205ENST00000434813 RABGAP1Q9Y3P9 1069 aa20.44■□□□□ 0.86
CLK1-205ENST00000434813 LRRIQ3A6PVS8 624 aaPredicted RBP20.44■□□□□ 0.86
CLK1-205ENST00000434813 CYP4A11Q02928 519 aa20.44■□□□□ 0.86
CLK1-205ENST00000434813 C2orf54Q08AI8 447 aa20.44■□□□□ 0.86
CLK1-205ENST00000434813 COG1Q8WTW3 980 aa20.44■□□□□ 0.86
CLK1-205ENST00000434813 DRC1Q96MC2 740 aa20.44■□□□□ 0.86
CLK1-205ENST00000434813 TAOK3Q9H2K8 898 aa20.44■□□□□ 0.86
CLK1-205ENST00000434813 BHMT2Q9H2M3 363 aa20.44■□□□□ 0.86
CLK1-205ENST00000434813 PLCB1Q9NQ66 1216 aa20.44■□□□□ 0.86
CLK1-205ENST00000434813 ARMCX3Q9UH62 379 aaPredicted RBP20.44■□□□□ 0.86
CLK1-205ENST00000434813 TSKSQ9UJT2 592 aa20.44■□□□□ 0.86
CLK1-205ENST00000434813 TMX2Q9Y320 296 aa20.44■□□□□ 0.86
CLK1-205ENST00000434813 SLC16A3O15427 465 aaKnown RBP20.43■□□□□ 0.86
CLK1-205ENST00000434813 TBCAO75347 108 aaKnown RBP20.43■□□□□ 0.86
CLK1-205ENST00000434813 MYBP10242 640 aa20.43■□□□□ 0.86
CLK1-205ENST00000434813 ECE1P42892 770 aa20.43■□□□□ 0.86
CLK1-205ENST00000434813 RAPGEF1Q13905 1077 aa20.43■□□□□ 0.86
CLK1-205ENST00000434813 DLGAP5Q15398 846 aa20.43■□□□□ 0.86
CLK1-205ENST00000434813 SLC18A3Q16572 532 aa20.43■□□□□ 0.86
CLK1-205ENST00000434813 RUSC1Q9BVN2 902 aa20.43■□□□□ 0.86
CLK1-205ENST00000434813 OLFML3Q9NRN5 406 aa20.43■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms