RNA–Protein interactions for RNA: ENST00000433949.7

CTCFL-209, Transcript of CCCTC-binding factor like, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CTCFL, Length 2,234 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTCFL-209ENST00000433949 CTDP1Q9Y5B0 961 aaPredicted RBP13.21□□□□□ -0.29
CTCFL-209ENST00000433949 A0A0G2JLL6 359 aaPredicted RBP13.21□□□□□ -0.29
CTCFL-209ENST00000433949 MSH4O15457 936 aa13.21□□□□□ -0.29
CTCFL-209ENST00000433949 IPO7O95373 1038 aaKnown RBP13.21□□□□□ -0.29
CTCFL-209ENST00000433949 MUTP22033 750 aa13.21□□□□□ -0.29
CTCFL-209ENST00000433949 HOXA13P31271 388 aaPredicted RBP13.21□□□□□ -0.29
CTCFL-209ENST00000433949 CYLC1P35663 651 aaPredicted RBP13.21□□□□□ -0.29
CTCFL-209ENST00000433949 ZCWPW2Q504Y3 356 aa13.21□□□□□ -0.29
CTCFL-209ENST00000433949 NCAPH2Q6IBW4 605 aa13.21□□□□□ -0.29
CTCFL-209ENST00000433949 CATSPERGQ6ZRH7 1159 aa13.21□□□□□ -0.29
CTCFL-209ENST00000433949 ZNF662Q6ZS27 426 aa13.21□□□□□ -0.29
CTCFL-209ENST00000433949 LRRC55Q6ZSA7 311 aa13.21□□□□□ -0.29
CTCFL-209ENST00000433949 PRRT2Q7Z6L0 340 aaPredicted RBP13.21□□□□□ -0.29
CTCFL-209ENST00000433949 SAPCD2Q86UD0 394 aa13.21□□□□□ -0.29
CTCFL-209ENST00000433949 UBXN4Q92575 508 aa13.21□□□□□ -0.29
CTCFL-209ENST00000433949 PCMTD1Q96MG8 357 aaPredicted RBP13.21□□□□□ -0.29
CTCFL-209ENST00000433949 PPP1R9AQ9ULJ8 1098 aa13.21□□□□□ -0.29
CTCFL-209ENST00000433949 MRFAP1Q9Y605 127 aa13.21□□□□□ -0.29
CTCFL-209ENST00000433949 PASKQ96RG2 1323 aa13.21□□□□□ -0.3
CTCFL-209ENST00000433949 CXCL11O14625 94 aa13.2□□□□□ -0.3
CTCFL-209ENST00000433949 FANCGO15287 622 aa13.2□□□□□ -0.3
CTCFL-209ENST00000433949 CFBP00751 764 aa13.2□□□□□ -0.3
CTCFL-209ENST00000433949 TUBB4BP68371 445 aa13.2□□□□□ -0.3
CTCFL-209ENST00000433949 SNAPC2Q13487 334 aa13.2□□□□□ -0.3
CTCFL-209ENST00000433949 PLS1Q14651 629 aa13.2□□□□□ -0.3
CTCFL-209ENST00000433949 COG2Q14746 738 aa13.2□□□□□ -0.3
CTCFL-209ENST00000433949 HERC4Q5GLZ8 1057 aaPredicted RBP13.2□□□□□ -0.3
CTCFL-209ENST00000433949 SH3D19Q5HYK7 790 aa13.2□□□□□ -0.3
CTCFL-209ENST00000433949 C12orf42Q96LP6 360 aa13.2□□□□□ -0.3
CTCFL-209ENST00000433949 EDEM3Q9BZQ6 932 aa13.2□□□□□ -0.3
CTCFL-209ENST00000433949 HAUS4Q9H6D7 363 aa13.2□□□□□ -0.3
CTCFL-209ENST00000433949 PCDHA2Q9Y5H9 948 aa13.2□□□□□ -0.3
CTCFL-209ENST00000433949 COL4A3BPQ9Y5P4 624 aa13.2□□□□□ -0.3
CTCFL-209ENST00000433949 MYH11P35749 1972 aa13.2□□□□□ -0.3
CTCFL-209ENST00000433949 IGLV3-22A0A075B6J6 115 aa13.2□□□□□ -0.3
CTCFL-209ENST00000433949 POTEFA5A3E0 1075 aa13.2□□□□□ -0.3
CTCFL-209ENST00000433949 SPATA31C1P0DKV0 1188 aa13.2□□□□□ -0.3
CTCFL-209ENST00000433949 STAT3P40763 770 aa13.2□□□□□ -0.3
CTCFL-209ENST00000433949 MARSP56192 900 aaKnown RBP13.2□□□□□ -0.3
CTCFL-209ENST00000433949 SETQ01105 290 aaPredicted RBP13.2□□□□□ -0.3
CTCFL-209ENST00000433949 ELF2Q15723 593 aa13.2□□□□□ -0.3
CTCFL-209ENST00000433949 EDRF1Q3B7T1 1238 aa13.2□□□□□ -0.3
CTCFL-209ENST00000433949 POTEGQ6S5H5 508 aa13.2□□□□□ -0.3
CTCFL-209ENST00000433949 POTEEQ6S8J3 1075 aa13.2□□□□□ -0.3
CTCFL-209ENST00000433949 EEF2KMTQ96G04 330 aa13.2□□□□□ -0.3
CTCFL-209ENST00000433949 VAV3Q9UKW4 847 aa13.2□□□□□ -0.3
CTCFL-209ENST00000433949 KCNH4Q9UQ05 1017 aa13.2□□□□□ -0.3
CTCFL-209ENST00000433949 PHIPQ8WWQ0 1821 aa13.2□□□□□ -0.3
CTCFL-209ENST00000433949 RBBP6Q7Z6E9 1792 aaKnown RBP13.19□□□□□ -0.3
CTCFL-209ENST00000433949 CCL15-CCL14A0A0B4J2E2 113 aa13.19□□□□□ -0.3
CTCFL-209ENST00000433949 VWA5AO00534 786 aa13.19□□□□□ -0.3
CTCFL-209ENST00000433949 HNRNPH3P31942 346 aaKnown RBP13.19□□□□□ -0.3
CTCFL-209ENST00000433949 IRX3P78415 501 aaPredicted RBP13.19□□□□□ -0.3
CTCFL-209ENST00000433949 NAA30Q147X3 362 aaPredicted RBP13.19□□□□□ -0.3
CTCFL-209ENST00000433949 CCL15Q16663 113 aa13.19□□□□□ -0.3
CTCFL-209ENST00000433949 SPRYD7Q5W111 196 aa13.19□□□□□ -0.3
CTCFL-209ENST00000433949 WDR59Q6PJI9 974 aa13.19□□□□□ -0.3
CTCFL-209ENST00000433949 EHBP1Q8NDI1 1231 aa13.19□□□□□ -0.3
CTCFL-209ENST00000433949 ACRBPQ8NEB7 543 aa13.19□□□□□ -0.3
CTCFL-209ENST00000433949 CHP1Q99653 195 aa13.19□□□□□ -0.3
CTCFL-209ENST00000433949 TUFT1Q9NNX1 390 aa13.19□□□□□ -0.3
CTCFL-209ENST00000433949 CCPG1Q9ULG6 757 aa13.19□□□□□ -0.3
CTCFL-209ENST00000433949 CTAGE9A4FU28 777 aa13.19□□□□□ -0.3
CTCFL-209ENST00000433949 CYP2C8P10632 490 aa13.19□□□□□ -0.3
CTCFL-209ENST00000433949 ALAS1P13196 640 aa13.19□□□□□ -0.3
CTCFL-209ENST00000433949 DSG3P32926 999 aa13.19□□□□□ -0.3
CTCFL-209ENST00000433949 PPP2R5CQ13362 524 aa13.19□□□□□ -0.3
CTCFL-209ENST00000433949 MOGSQ13724 837 aa13.19□□□□□ -0.3
CTCFL-209ENST00000433949 TBC1D5Q92609 795 aa13.19□□□□□ -0.3
CTCFL-209ENST00000433949 AGPAT5Q9NUQ2 364 aa13.19□□□□□ -0.3
CTCFL-209ENST00000433949 PNMA2Q9UL42 364 aa13.19□□□□□ -0.3
CTCFL-209ENST00000433949 FAM184BQ9ULE4 1060 aa13.19□□□□□ -0.3
CTCFL-209ENST00000433949 PLAGL2Q9UPG8 496 aa13.19□□□□□ -0.3
CTCFL-209ENST00000433949 SIK3Q9Y2K2 1263 aa13.19□□□□□ -0.3
CTCFL-209ENST00000433949 PAPPA2Q9BXP8 1791 aa13.18□□□□□ -0.3
CTCFL-209ENST00000433949 SPDYE16A6NNV3 312 aaPredicted RBP13.18□□□□□ -0.3
CTCFL-209ENST00000433949 ZBED4O75132 1171 aa13.18□□□□□ -0.3
CTCFL-209ENST00000433949 TADA3O75528 432 aa13.18□□□□□ -0.3
CTCFL-209ENST00000433949 EYA4O95677 639 aa13.18□□□□□ -0.3
CTCFL-209ENST00000433949 LRRC41Q15345 812 aa13.18□□□□□ -0.3
CTCFL-209ENST00000433949 ERCC6LQ2NKX8 1250 aa13.18□□□□□ -0.3
CTCFL-209ENST00000433949 GLIPR1L2Q4G1C9 344 aa13.18□□□□□ -0.3
CTCFL-209ENST00000433949 CEP55Q53EZ4 464 aa13.18□□□□□ -0.3
CTCFL-209ENST00000433949 ARSHQ5FYA8 562 aa13.18□□□□□ -0.3
CTCFL-209ENST00000433949 ZNF569Q5MCW4 686 aa13.18□□□□□ -0.3
CTCFL-209ENST00000433949 SAMD3Q8N6K7 520 aa13.18□□□□□ -0.3
CTCFL-209ENST00000433949 MS4A4AQ96JQ5 239 aa13.18□□□□□ -0.3
CTCFL-209ENST00000433949 EIF2AK1Q9BQI3 630 aaKnown RBP13.18□□□□□ -0.3
CTCFL-209ENST00000433949 PAGR1Q9BTK6 254 aa13.18□□□□□ -0.3
CTCFL-209ENST00000433949 WDR11Q9BZH6 1224 aa13.18□□□□□ -0.3
CTCFL-209ENST00000433949 NUCKS1Q9H1E3 243 aaKnown RBP13.18□□□□□ -0.3
CTCFL-209ENST00000433949 ASCC2Q9H1I8 757 aaPredicted RBP13.18□□□□□ -0.3
CTCFL-209ENST00000433949 SLC38A10Q9HBR0 1119 aa13.18□□□□□ -0.3
CTCFL-209ENST00000433949 ARGLU1Q9NWB6 273 aaPredicted RBP13.18□□□□□ -0.3
CTCFL-209ENST00000433949 ZNF536O15090 1300 aa13.18□□□□□ -0.3
CTCFL-209ENST00000433949 TMEM88BA6NKF7 163 aa13.17□□□□□ -0.3
CTCFL-209ENST00000433949 EIF3CLB5ME19 914 aaKnown RBP13.17□□□□□ -0.3
CTCFL-209ENST00000433949 KRT86O43790 486 aa13.17□□□□□ -0.3
CTCFL-209ENST00000433949 ECM2O94769 699 aaPredicted RBP13.17□□□□□ -0.3
CTCFL-209ENST00000433949 ICAM1P05362 532 aa13.17□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms