RNA–Protein interactions for RNA: ENST00000433822.1

COL17A1-204, Transcript of collagen type XVII alpha 1 chain, humanhuman

TSL 5

Gene COL17A1, Length 537 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL17A1-204ENST00000433822 SRGNP10124 158 aa8.3□□□□□ -1.08
COL17A1-204ENST00000433822 CASQ1P31415 396 aa8.3□□□□□ -1.08
COL17A1-204ENST00000433822 PDE6BP35913 854 aa8.3□□□□□ -1.08
COL17A1-204ENST00000433822 ZNF543Q08ER8 600 aa8.3□□□□□ -1.08
COL17A1-204ENST00000433822 KARSQ15046 597 aaKnown RBP8.3□□□□□ -1.08
COL17A1-204ENST00000433822 MEA1Q16626 185 aa8.3□□□□□ -1.08
COL17A1-204ENST00000433822 TMEM266Q2M3C6 531 aa8.3□□□□□ -1.08
COL17A1-204ENST00000433822 KLHL10Q6JEL2 608 aa8.3□□□□□ -1.08
COL17A1-204ENST00000433822 ZSCAN29Q8IWY8 852 aaPredicted RBP8.3□□□□□ -1.08
COL17A1-204ENST00000433822 Q8N3U1 123 aa8.3□□□□□ -1.08
COL17A1-204ENST00000433822 SLC44A5Q8NCS7 719 aa8.3□□□□□ -1.08
COL17A1-204ENST00000433822 MNS1Q8NEH6 495 aa8.3□□□□□ -1.08
COL17A1-204ENST00000433822 UBXN4Q92575 508 aa8.3□□□□□ -1.08
COL17A1-204ENST00000433822 RABGGTAQ92696 567 aa8.3□□□□□ -1.08
COL17A1-204ENST00000433822 MKL1Q969V6 931 aa8.3□□□□□ -1.08
COL17A1-204ENST00000433822 CALML4Q96GE6 196 aa8.3□□□□□ -1.08
COL17A1-204ENST00000433822 ERGIC2Q96RQ1 377 aa8.3□□□□□ -1.08
COL17A1-204ENST00000433822 DNAJC7Q99615 494 aa8.3□□□□□ -1.08
COL17A1-204ENST00000433822 RIC8AQ9NPQ8 531 aa8.3□□□□□ -1.08
COL17A1-204ENST00000433822 ABHD10Q9NUJ1 306 aa8.3□□□□□ -1.08
COL17A1-204ENST00000433822 SERPINB13Q9UIV8 391 aa8.3□□□□□ -1.08
COL17A1-204ENST00000433822 CAPN11Q9UMQ6 739 aa8.3□□□□□ -1.08
COL17A1-204ENST00000433822 ZNF646O15015 1829 aaPredicted RBP8.3□□□□□ -1.08
COL17A1-204ENST00000433822 KDM3AQ9Y4C1 1321 aa8.29□□□□□ -1.08
COL17A1-204ENST00000433822 MYH4Q9Y623 1939 aa8.29□□□□□ -1.08
COL17A1-204ENST00000433822 KIF5CO60282 957 aa8.29□□□□□ -1.08
COL17A1-204ENST00000433822 HLA-DOAP06340 250 aa8.29□□□□□ -1.08
COL17A1-204ENST00000433822 FURINP09958 794 aa8.29□□□□□ -1.08
COL17A1-204ENST00000433822 HNRNPH3P31942 346 aaKnown RBP8.29□□□□□ -1.08
COL17A1-204ENST00000433822 ADCY7P51828 1080 aa8.29□□□□□ -1.08
COL17A1-204ENST00000433822 ADKP55263 362 aaKnown RBP8.29□□□□□ -1.08
COL17A1-204ENST00000433822 LRRC63Q05C16 580 aa8.29□□□□□ -1.08
COL17A1-204ENST00000433822 RBL2Q08999 1139 aa8.29□□□□□ -1.08
COL17A1-204ENST00000433822 FSTL1Q12841 308 aa8.29□□□□□ -1.08
COL17A1-204ENST00000433822 BMS1Q14692 1282 aaKnown RBP8.29□□□□□ -1.08
COL17A1-204ENST00000433822 ELF2Q15723 593 aa8.29□□□□□ -1.08
COL17A1-204ENST00000433822 CENPPQ6IPU0 288 aa8.29□□□□□ -1.08
COL17A1-204ENST00000433822 UNC13DQ70J99 1090 aa8.29□□□□□ -1.08
COL17A1-204ENST00000433822 RSRC2Q7L4I2 434 aaKnown RBP8.29□□□□□ -1.08
COL17A1-204ENST00000433822 IRF2BP1Q8IU81 584 aa8.29□□□□□ -1.08
COL17A1-204ENST00000433822 CCDC170Q8IYT3 715 aa8.29□□□□□ -1.08
COL17A1-204ENST00000433822 KRT222Q8N1A0 295 aa8.29□□□□□ -1.08
COL17A1-204ENST00000433822 GUF1Q8N442 669 aaKnown RBP8.29□□□□□ -1.08
COL17A1-204ENST00000433822 GOLGA6L1Q8N7Z2 621 aa8.29□□□□□ -1.08
COL17A1-204ENST00000433822 MB21D1Q8N884 522 aa8.29□□□□□ -1.08
COL17A1-204ENST00000433822 CEP112Q8N8E3 955 aa8.29□□□□□ -1.08
COL17A1-204ENST00000433822 OR8K1Q8NGG5 319 aa8.29□□□□□ -1.08
COL17A1-204ENST00000433822 TBCKQ8TEA7 893 aa8.29□□□□□ -1.08
COL17A1-204ENST00000433822 DCAF4Q8WV16 495 aa8.29□□□□□ -1.08
COL17A1-204ENST00000433822 EDARADDQ8WWZ3 215 aa8.29□□□□□ -1.08
COL17A1-204ENST00000433822 P2RX5Q93086 422 aa8.29□□□□□ -1.08
COL17A1-204ENST00000433822 ZDHHC15Q96MV8 337 aa8.29□□□□□ -1.08
COL17A1-204ENST00000433822 IDI2Q9BXS1 227 aa8.29□□□□□ -1.08
COL17A1-204ENST00000433822 EDEM3Q9BZQ6 932 aa8.29□□□□□ -1.08
COL17A1-204ENST00000433822 HAUS4Q9H6D7 363 aa8.29□□□□□ -1.08
COL17A1-204ENST00000433822 ARHGEF10LQ9HCE6 1279 aa8.29□□□□□ -1.08
COL17A1-204ENST00000433822 EXOC1Q9NV70 894 aa8.29□□□□□ -1.08
COL17A1-204ENST00000433822 ZNHIT6Q9NWK9 470 aaKnown RBP8.29□□□□□ -1.08
COL17A1-204ENST00000433822 NYAP2Q9P242 653 aa8.29□□□□□ -1.08
COL17A1-204ENST00000433822 MAGEC2Q9UBF1 373 aaPredicted RBP8.29□□□□□ -1.08
COL17A1-204ENST00000433822 PIK3R2O00459 728 aa8.28□□□□□ -1.08
COL17A1-204ENST00000433822 ZBTB5O15062 677 aa8.28□□□□□ -1.08
COL17A1-204ENST00000433822 ADAMTS3O15072 1205 aa8.28□□□□□ -1.08
COL17A1-204ENST00000433822 TBX3O15119 743 aa8.28□□□□□ -1.08
COL17A1-204ENST00000433822 URI1O94763 535 aaPredicted RBP8.28□□□□□ -1.08
COL17A1-204ENST00000433822 PLCG1P19174 1290 aa8.28□□□□□ -1.08
COL17A1-204ENST00000433822 COL8A1P27658 744 aa8.28□□□□□ -1.08
COL17A1-204ENST00000433822 CASP14P31944 242 aa8.28□□□□□ -1.08
COL17A1-204ENST00000433822 SCTRP47872 440 aa8.28□□□□□ -1.08
COL17A1-204ENST00000433822 FXR1P51114 621 aaKnown RBP eCLIP8.28□□□□□ -1.08
COL17A1-204ENST00000433822 MRPL12P52815 198 aaKnown RBP8.28□□□□□ -1.08
COL17A1-204ENST00000433822 STX17P56962 302 aa8.28□□□□□ -1.08
COL17A1-204ENST00000433822 GNG11P61952 73 aa8.28□□□□□ -1.08
COL17A1-204ENST00000433822 EHHADHQ08426 723 aa8.28□□□□□ -1.08
COL17A1-204ENST00000433822 TRAF1Q13077 416 aa8.28□□□□□ -1.08
COL17A1-204ENST00000433822 AP3B2Q13367 1082 aa8.28□□□□□ -1.08
COL17A1-204ENST00000433822 LBRQ14739 615 aaKnown RBP8.28□□□□□ -1.08
COL17A1-204ENST00000433822 TMEM119Q4V9L6 283 aa8.28□□□□□ -1.08
COL17A1-204ENST00000433822 TMEM259Q4ZIN3 620 aa8.28□□□□□ -1.08
COL17A1-204ENST00000433822 FBXO38Q6PIJ6 1188 aa8.28□□□□□ -1.08
COL17A1-204ENST00000433822 RAD9BQ6WBX8 426 aa8.28□□□□□ -1.08
COL17A1-204ENST00000433822 C1orf229Q6ZS94 237 aaPredicted RBP8.28□□□□□ -1.08
COL17A1-204ENST00000433822 TOGARAM2Q6ZUX3 1019 aa8.28□□□□□ -1.08
COL17A1-204ENST00000433822 SV2BQ7L1I2 683 aa8.28□□□□□ -1.08
COL17A1-204ENST00000433822 RASGRP4Q8TDF6 673 aa8.28□□□□□ -1.08
COL17A1-204ENST00000433822 TEKT1Q969V4 418 aa8.28□□□□□ -1.08
COL17A1-204ENST00000433822 MASTLQ96GX5 879 aa8.28□□□□□ -1.08
COL17A1-204ENST00000433822 MBOAT7Q96N66 472 aa8.28□□□□□ -1.08
COL17A1-204ENST00000433822 PIGSQ96S52 555 aa8.28□□□□□ -1.08
COL17A1-204ENST00000433822 DUSP9Q99956 384 aaKnown RBP8.28□□□□□ -1.08
COL17A1-204ENST00000433822 MMTAG2Q9BU76 263 aaKnown RBP8.28□□□□□ -1.08
COL17A1-204ENST00000433822 ZC3H12CQ9C0D7 883 aaKnown RBP8.28□□□□□ -1.08
COL17A1-204ENST00000433822 TTYH3Q9C0H2 523 aa8.28□□□□□ -1.08
COL17A1-204ENST00000433822 NT5C3AQ9H0P0 336 aa8.28□□□□□ -1.08
COL17A1-204ENST00000433822 TMX4Q9H1E5 349 aaPredicted RBP8.28□□□□□ -1.08
COL17A1-204ENST00000433822 BLZF1Q9H2G9 400 aa8.28□□□□□ -1.08
COL17A1-204ENST00000433822 SAP30BPQ9UHR5 308 aaKnown RBP8.28□□□□□ -1.08
COL17A1-204ENST00000433822 CDC23Q9UJX2 597 aa8.28□□□□□ -1.08
COL17A1-204ENST00000433822 LUC7L2Q9Y383 392 aaKnown RBP8.28□□□□□ -1.08
COL17A1-204ENST00000433822 PCDHB11Q9Y5F2 797 aa8.28□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms