RNA–Protein interactions for RNA: ENST00000433535.6

RPUSD3-206, Transcript of RNA pseudouridylate synthase domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene RPUSD3, Length 1,178 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPUSD3-206ENST00000433535 APBB2Q92870 758 aa24.92■■□□□ 1.58
RPUSD3-206ENST00000433535 YME1L1Q96TA2 773 aa24.92■■□□□ 1.58
RPUSD3-206ENST00000433535 MBLAC1A4D2B0 266 aaPredicted RBP24.91■■□□□ 1.58
RPUSD3-206ENST00000433535 FOSP01100 380 aaPredicted RBP24.91■■□□□ 1.58
RPUSD3-206ENST00000433535 HMGB1P09429 215 aaKnown RBP24.91■■□□□ 1.58
RPUSD3-206ENST00000433535 METAP2P50579 478 aaKnown RBP eCLIP24.91■■□□□ 1.58
RPUSD3-206ENST00000433535 MGAT3Q09327 533 aa24.91■■□□□ 1.58
RPUSD3-206ENST00000433535 ITGB3BPQ13352 177 aaPredicted RBP24.91■■□□□ 1.58
RPUSD3-206ENST00000433535 CEP55Q53EZ4 464 aa24.91■■□□□ 1.58
RPUSD3-206ENST00000433535 RPAINQ86UA6 219 aa24.91■■□□□ 1.58
RPUSD3-206ENST00000433535 FBXO22Q8NEZ5 403 aa24.91■■□□□ 1.58
RPUSD3-206ENST00000433535 TOP1MTQ969P6 601 aa24.91■■□□□ 1.58
RPUSD3-206ENST00000433535 JAKMIP1Q96N16 626 aaKnown RBP24.91■■□□□ 1.58
RPUSD3-206ENST00000433535 SDF4Q9BRK5 362 aa24.91■■□□□ 1.58
RPUSD3-206ENST00000433535 NLRC5Q86WI3 1866 aa24.9■■□□□ 1.58
RPUSD3-206ENST00000433535 INSRRP14616 1297 aa24.9■■□□□ 1.58
RPUSD3-206ENST00000433535 ADD1P35611 737 aaKnown RBP24.9■■□□□ 1.58
RPUSD3-206ENST00000433535 SREBF1P36956 1147 aa24.9■■□□□ 1.58
RPUSD3-206ENST00000433535 CLK2P49760 499 aaKnown RBP24.9■■□□□ 1.58
RPUSD3-206ENST00000433535 RCAN1P53805 252 aa24.9■■□□□ 1.58
RPUSD3-206ENST00000433535 ACTR2P61160 394 aa24.9■■□□□ 1.58
RPUSD3-206ENST00000433535 AP3B2Q13367 1082 aa24.9■■□□□ 1.58
RPUSD3-206ENST00000433535 LPIN1Q14693 890 aa24.9■■□□□ 1.58
RPUSD3-206ENST00000433535 Q6ZUG5 572 aa24.9■■□□□ 1.58
RPUSD3-206ENST00000433535 HLA-CQ95604 372 aa24.9■■□□□ 1.58
RPUSD3-206ENST00000433535 AZI2Q9H6S1 392 aa24.9■■□□□ 1.58
RPUSD3-206ENST00000433535 AGO4Q9HCK5 861 aaKnown RBP24.9■■□□□ 1.58
RPUSD3-206ENST00000433535 COG5Q9UP83 839 aa24.9■■□□□ 1.58
RPUSD3-206ENST00000433535 TRPC6Q9Y210 931 aa24.9■■□□□ 1.58
RPUSD3-206ENST00000433535 COL4A6Q14031 1691 aa24.9■■□□□ 1.58
RPUSD3-206ENST00000433535 MUC3AQ02505 3323 aa24.9■■□□□ 1.58
RPUSD3-206ENST00000433535 NFASCO94856 1347 aa24.89■■□□□ 1.58
RPUSD3-206ENST00000433535 RSPH3Q86UC2 560 aa24.89■■□□□ 1.58
RPUSD3-206ENST00000433535 TRAPPC12Q8WVT3 735 aa24.89■■□□□ 1.58
RPUSD3-206ENST00000433535 KCNB2Q92953 911 aa24.89■■□□□ 1.58
RPUSD3-206ENST00000433535 BRF1Q92994 677 aa24.89■■□□□ 1.58
RPUSD3-206ENST00000433535 FAM49AQ9H0Q0 323 aaPredicted RBP24.89■■□□□ 1.58
RPUSD3-206ENST00000433535 LMCD1Q9NZU5 365 aa24.89■■□□□ 1.58
RPUSD3-206ENST00000433535 SNX14Q9Y5W7 946 aa24.89■■□□□ 1.58
RPUSD3-206ENST00000433535 CDY2AQ9Y6F7 541 aa24.89■■□□□ 1.58
RPUSD3-206ENST00000433535 DDX39AO00148 427 aaKnown RBP24.88■■□□□ 1.57
RPUSD3-206ENST00000433535 HSPA4P34932 840 aa24.88■■□□□ 1.57
RPUSD3-206ENST00000433535 PFKFB3Q16875 520 aaPredicted RBP24.88■■□□□ 1.57
RPUSD3-206ENST00000433535 JAKMIP3Q5VZ66 844 aa24.88■■□□□ 1.57
RPUSD3-206ENST00000433535 TEX2Q8IWB9 1127 aa24.88■■□□□ 1.57
RPUSD3-206ENST00000433535 ADAMTS3O15072 1205 aa24.87■■□□□ 1.57
RPUSD3-206ENST00000433535 SCG2P13521 617 aa24.87■■□□□ 1.57
RPUSD3-206ENST00000433535 ZNF76P36508 570 aa24.87■■□□□ 1.57
RPUSD3-206ENST00000433535 PLCB4Q15147 1175 aa24.87■■□□□ 1.57
RPUSD3-206ENST00000433535 EPC2Q52LR7 807 aa24.87■■□□□ 1.57
RPUSD3-206ENST00000433535 BLOC1S2Q6QNY1 142 aa24.87■■□□□ 1.57
RPUSD3-206ENST00000433535 CCDC136Q96JN2 1154 aa24.87■■□□□ 1.57
RPUSD3-206ENST00000433535 BRWD1Q9NSI6 2320 aa24.87■■□□□ 1.57
RPUSD3-206ENST00000433535 NCOR1O75376 2440 aa24.87■■□□□ 1.57
RPUSD3-206ENST00000433535 XIRP2A4UGR9 3374 aa24.87■■□□□ 1.57
RPUSD3-206ENST00000433535 NID2Q14112 1375 aa24.86■■□□□ 1.57
RPUSD3-206ENST00000433535 FAM86B1E9PN63 330 aa24.86■■□□□ 1.57
RPUSD3-206ENST00000433535 MEIS1O00470 390 aa24.86■■□□□ 1.57
RPUSD3-206ENST00000433535 PPFIA3O75145 1194 aa24.86■■□□□ 1.57
RPUSD3-206ENST00000433535 CCNE2O96020 404 aa24.86■■□□□ 1.57
RPUSD3-206ENST00000433535 FAM86B2P0C5J1 330 aa24.86■■□□□ 1.57
RPUSD3-206ENST00000433535 MRPS6P82932 125 aaKnown RBP24.86■■□□□ 1.57
RPUSD3-206ENST00000433535 FBXO47Q5MNV8 452 aa24.86■■□□□ 1.57
RPUSD3-206ENST00000433535 UIMC1Q96RL1 719 aa24.86■■□□□ 1.57
RPUSD3-206ENST00000433535 GLT8D2Q9H1C3 349 aa24.86■■□□□ 1.57
RPUSD3-206ENST00000433535 RALGAPA2Q2PPJ7 1873 aa24.85■■□□□ 1.57
RPUSD3-206ENST00000433535 CCDC196A0A1B0GTZ2 297 aa24.85■■□□□ 1.57
RPUSD3-206ENST00000433535 RRN3P2A6NIE6 340 aa24.85■■□□□ 1.57
RPUSD3-206ENST00000433535 STAT5BP51692 787 aa24.85■■□□□ 1.57
RPUSD3-206ENST00000433535 TMEM62Q0P6H9 643 aa24.85■■□□□ 1.57
RPUSD3-206ENST00000433535 AGO3Q9H9G7 860 aaKnown RBP24.85■■□□□ 1.57
RPUSD3-206ENST00000433535 NEFLP07196 543 aa24.84■■□□□ 1.57
RPUSD3-206ENST00000433535 PKN1Q16512 942 aa24.84■■□□□ 1.57
RPUSD3-206ENST00000433535 TSHZ1Q6ZSZ6 1077 aa24.84■■□□□ 1.57
RPUSD3-206ENST00000433535 PLPPR4Q7Z2D5 763 aa24.84■■□□□ 1.57
RPUSD3-206ENST00000433535 PLA2G4DQ86XP0 818 aa24.84■■□□□ 1.57
RPUSD3-206ENST00000433535 PHKBQ93100 1093 aa24.84■■□□□ 1.57
RPUSD3-206ENST00000433535 SAMD11Q96NU1 681 aa24.84■■□□□ 1.57
RPUSD3-206ENST00000433535 LOXHD1Q8IVV2 1947 aa24.84■■□□□ 1.57
RPUSD3-206ENST00000433535 IGLV3-22A0A075B6J6 115 aa24.83■■□□□ 1.57
RPUSD3-206ENST00000433535 ESYT2A0FGR8 921 aa24.83■■□□□ 1.57
RPUSD3-206ENST00000433535 POTEB3A0JP26 581 aa24.83■■□□□ 1.57
RPUSD3-206ENST00000433535 RPS6KB1P23443 525 aa24.83■■□□□ 1.57
RPUSD3-206ENST00000433535 CD52P31358 61 aa24.83■■□□□ 1.57
RPUSD3-206ENST00000433535 POTEBQ6S5H4 581 aa24.83■■□□□ 1.57
RPUSD3-206ENST00000433535 NIPA1Q7RTP0 329 aa24.83■■□□□ 1.57
RPUSD3-206ENST00000433535 TMEM192Q8IY95 271 aa24.83■■□□□ 1.57
RPUSD3-206ENST00000433535 CRYGNQ8WXF5 182 aa24.83■■□□□ 1.57
RPUSD3-206ENST00000433535 LINC01599Q8WXQ3 324 aa24.83■■□□□ 1.57
RPUSD3-206ENST00000433535 ZMYND12Q9H0C1 365 aa24.83■■□□□ 1.57
RPUSD3-206ENST00000433535 BACH1O14867 736 aa24.82■■□□□ 1.56
RPUSD3-206ENST00000433535 ATG7O95352 703 aa24.82■■□□□ 1.56
RPUSD3-206ENST00000433535 CCDC60Q8IWA6 550 aaPredicted RBP24.82■■□□□ 1.56
RPUSD3-206ENST00000433535 REXO1Q8N1G1 1221 aaKnown RBP24.82■■□□□ 1.56
RPUSD3-206ENST00000433535 MRPL38Q96DV4 380 aaKnown RBP24.82■■□□□ 1.56
RPUSD3-206ENST00000433535 IL17RAQ96F46 866 aa24.82■■□□□ 1.56
RPUSD3-206ENST00000433535 TRPV2Q9Y5S1 764 aa24.82■■□□□ 1.56
RPUSD3-206ENST00000433535 ADGRA3Q8IWK6 1321 aa24.82■■□□□ 1.56
RPUSD3-206ENST00000433535 ATG2AQ2TAZ0 1938 aa24.81■■□□□ 1.56
RPUSD3-206ENST00000433535 IGKV6D-21A0A0A0MT36 114 aa24.81■■□□□ 1.56
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms