RNA–Protein interactions for RNA: ENST00000432425.5

CLK1-204, Transcript of CDC like kinase 1, humanhuman

TSL 1 (best)

Gene CLK1, Length 1,682 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-204ENST00000432425 BARX1Q9HBU1 254 aaPredicted RBP5.08□□□□□ -1.6
CLK1-204ENST00000432425 ARHGAP28Q9P2N2 729 aa5.08□□□□□ -1.6
CLK1-204ENST00000432425 ZFP69BQ9UJL9 534 aa5.08□□□□□ -1.6
CLK1-204ENST00000432425 INVSQ9Y283 1065 aa5.08□□□□□ -1.6
CLK1-204ENST00000432425 CHGBP05060 677 aa5.07□□□□□ -1.6
CLK1-204ENST00000432425 BUD31P41223 144 aaPredicted RBP5.07□□□□□ -1.6
CLK1-204ENST00000432425 SKOR2Q2VWA4 1001 aaPredicted RBP5.07□□□□□ -1.6
CLK1-204ENST00000432425 KLHL36Q8N4N3 616 aa5.07□□□□□ -1.6
CLK1-204ENST00000432425 NCOA5Q9HCD5 579 aaKnown RBP5.07□□□□□ -1.6
CLK1-204ENST00000432425 COQ6Q9Y2Z9 468 aa5.07□□□□□ -1.6
CLK1-204ENST00000432425 PRAMEF25A6NGN4 478 aa5.06□□□□□ -1.6
CLK1-204ENST00000432425 FAM90A27PA6NNH2 459 aa5.06□□□□□ -1.6
CLK1-204ENST00000432425 K7ESM1 405 aa5.06□□□□□ -1.6
CLK1-204ENST00000432425 PLD2O14939 933 aa5.06□□□□□ -1.6
CLK1-204ENST00000432425 LACTBP83111 547 aaPredicted RBP5.06□□□□□ -1.6
CLK1-204ENST00000432425 DBPQ10586 325 aaPredicted RBP5.06□□□□□ -1.6
CLK1-204ENST00000432425 SURF1Q15526 300 aa5.06□□□□□ -1.6
CLK1-204ENST00000432425 STPG3Q8N7X2 389 aa5.06□□□□□ -1.6
CLK1-204ENST00000432425 CELF4Q9BZC1 486 aaKnown RBP5.06□□□□□ -1.6
CLK1-204ENST00000432425 SMURF1Q9HCE7 757 aa5.06□□□□□ -1.6
CLK1-204ENST00000432425 SLC39A2Q9NP94 309 aa5.06□□□□□ -1.6
CLK1-204ENST00000432425 ZNF536O15090 1300 aa5.06□□□□□ -1.6
CLK1-204ENST00000432425 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP5.05□□□□□ -1.6
CLK1-204ENST00000432425 KCNK3O14649 394 aa5.05□□□□□ -1.6
CLK1-204ENST00000432425 CLASP2O75122 1294 aaKnown RBP5.05□□□□□ -1.6
CLK1-204ENST00000432425 COL6A1P12109 1028 aa5.05□□□□□ -1.6
CLK1-204ENST00000432425 NFATC3Q12968 1075 aa5.05□□□□□ -1.6
CLK1-204ENST00000432425 CCDC144BQ3MJ40 725 aa5.05□□□□□ -1.6
CLK1-204ENST00000432425 PRRT2Q7Z6L0 340 aaPredicted RBP5.05□□□□□ -1.6
CLK1-204ENST00000432425 SCLYQ96I15 445 aa5.05□□□□□ -1.6
CLK1-204ENST00000432425 TACO1Q9BSH4 297 aaKnown RBP5.05□□□□□ -1.6
CLK1-204ENST00000432425 KCND1Q9NSA2 647 aa5.05□□□□□ -1.6
CLK1-204ENST00000432425 CNOT11Q9UKZ1 510 aaKnown RBP5.05□□□□□ -1.6
CLK1-204ENST00000432425 ZDHHC9Q9Y397 364 aa5.05□□□□□ -1.6
CLK1-204ENST00000432425 TCRBV16S1A1N1A0A5B0 115 aa5.05□□□□□ -1.6
CLK1-204ENST00000432425 H0Y858 1186 aa5.05□□□□□ -1.6
CLK1-204ENST00000432425 KCNQ2O43526 872 aa5.05□□□□□ -1.6
CLK1-204ENST00000432425 B4GALT3O60512 393 aa5.05□□□□□ -1.6
CLK1-204ENST00000432425 NPTXRO95502 500 aa5.05□□□□□ -1.6
CLK1-204ENST00000432425 PLATP00750 562 aa5.05□□□□□ -1.6
CLK1-204ENST00000432425 HHIPL2Q6UWX4 724 aa5.05□□□□□ -1.6
CLK1-204ENST00000432425 DPP8Q6V1X1 898 aaPredicted RBP5.05□□□□□ -1.6
CLK1-204ENST00000432425 FGD2Q7Z6J4 655 aa5.05□□□□□ -1.6
CLK1-204ENST00000432425 KBTBD2Q8IY47 623 aa5.05□□□□□ -1.6
CLK1-204ENST00000432425 NUDT10Q8NFP7 164 aa5.05□□□□□ -1.6
CLK1-204ENST00000432425 SH3TC2Q8TF17 1288 aa5.05□□□□□ -1.6
CLK1-204ENST00000432425 NUDT11Q96G61 164 aa5.05□□□□□ -1.6
CLK1-204ENST00000432425 SCDO00767 359 aa5.04□□□□□ -1.6
CLK1-204ENST00000432425 KLHL18O94889 574 aa5.04□□□□□ -1.6
CLK1-204ENST00000432425 RAPGEF3O95398 923 aa5.04□□□□□ -1.6
CLK1-204ENST00000432425 KNG1P01042 644 aa5.04□□□□□ -1.6
CLK1-204ENST00000432425 C4BPAP04003 597 aaKnown RBP5.04□□□□□ -1.6
CLK1-204ENST00000432425 HERVK_113P62684 666 aa5.04□□□□□ -1.6
CLK1-204ENST00000432425 SPATS1Q496A3 300 aa5.04□□□□□ -1.6
CLK1-204ENST00000432425 Q6ZUG5 572 aa5.04□□□□□ -1.6
CLK1-204ENST00000432425 MBD6Q96DN6 1003 aa5.04□□□□□ -1.6
CLK1-204ENST00000432425 TRIM39Q9HCM9 518 aa5.04□□□□□ -1.6
CLK1-204ENST00000432425 SLC12A8A0AV02 714 aa5.03□□□□□ -1.6
CLK1-204ENST00000432425 B4E1Z4 1266 aa5.03□□□□□ -1.6
CLK1-204ENST00000432425 LAMTOR5O43504 91 aa5.03□□□□□ -1.6
CLK1-204ENST00000432425 HIP1RO75146 1068 aa5.03□□□□□ -1.6
CLK1-204ENST00000432425 IL18BPO95998 194 aa5.03□□□□□ -1.6
CLK1-204ENST00000432425 ITGB3P05106 788 aa5.03□□□□□ -1.6
CLK1-204ENST00000432425 PTGS1P23219 599 aa5.03□□□□□ -1.6
CLK1-204ENST00000432425 SQSTM1Q13501 440 aa5.03□□□□□ -1.6
CLK1-204ENST00000432425 TBC1D10BQ4KMP7 808 aaPredicted RBP5.03□□□□□ -1.6
CLK1-204ENST00000432425 FNDC3BQ53EP0 1204 aaKnown RBP5.03□□□□□ -1.6
CLK1-204ENST00000432425 TMEM177Q53S58 311 aa5.03□□□□□ -1.6
CLK1-204ENST00000432425 CPZQ66K79 652 aa5.03□□□□□ -1.6
CLK1-204ENST00000432425 PKN3Q6P5Z2 889 aa5.03□□□□□ -1.6
CLK1-204ENST00000432425 GLB1LQ6UWU2 654 aa5.03□□□□□ -1.6
CLK1-204ENST00000432425 ARHGEF18Q6ZSZ5 1173 aa5.03□□□□□ -1.6
CLK1-204ENST00000432425 OVCH1Q7RTY7 1134 aa5.03□□□□□ -1.6
CLK1-204ENST00000432425 RALYLQ86SE5 291 aaKnown RBP5.03□□□□□ -1.6
CLK1-204ENST00000432425 DDX53Q86TM3 631 aaKnown RBP5.03□□□□□ -1.6
CLK1-204ENST00000432425 C2orf69Q8N8R5 385 aa5.03□□□□□ -1.6
CLK1-204ENST00000432425 IGSF22Q8N9C0 903 aa5.03□□□□□ -1.6
CLK1-204ENST00000432425 ADAM29Q9UKF5 820 aa5.03□□□□□ -1.6
CLK1-204ENST00000432425 AOAHP28039 575 aa5.02□□□□□ -1.61
CLK1-204ENST00000432425 IGFALSP35858 605 aa5.02□□□□□ -1.61
CLK1-204ENST00000432425 ZNF827Q17R98 1081 aa5.02□□□□□ -1.61
CLK1-204ENST00000432425 NOSTRINQ8IVI9 506 aa5.02□□□□□ -1.61
CLK1-204ENST00000432425 REXO1L1PQ8IX06 675 aa5.02□□□□□ -1.61
CLK1-204ENST00000432425 WDR48Q8TAF3 677 aa5.02□□□□□ -1.61
CLK1-204ENST00000432425 JADE2Q9NQC1 790 aa5.02□□□□□ -1.61
CLK1-204ENST00000432425 INCENPQ9NQS7 918 aa5.02□□□□□ -1.61
CLK1-204ENST00000432425 KCNH7Q9NS40 1196 aa5.02□□□□□ -1.61
CLK1-204ENST00000432425 B4GALT4O60513 344 aa5.02□□□□□ -1.61
CLK1-204ENST00000432425 PPP2CBP62714 309 aa5.02□□□□□ -1.61
CLK1-204ENST00000432425 PPP2CAP67775 309 aa5.02□□□□□ -1.61
CLK1-204ENST00000432425 EFEMP1Q12805 493 aa5.02□□□□□ -1.61
CLK1-204ENST00000432425 WDR72Q3MJ13 1102 aa5.02□□□□□ -1.61
CLK1-204ENST00000432425 ABHD17CQ6PCB6 329 aa5.02□□□□□ -1.61
CLK1-204ENST00000432425 IFNL2Q8IZJ0 200 aa5.02□□□□□ -1.61
CLK1-204ENST00000432425 AJUBAQ96IF1 538 aa5.02□□□□□ -1.61
CLK1-204ENST00000432425 FOXP2O15409 715 aa5.01□□□□□ -1.61
CLK1-204ENST00000432425 OPA1O60313 960 aa5.01□□□□□ -1.61
CLK1-204ENST00000432425 ASMTLO95671 621 aa5.01□□□□□ -1.61
CLK1-204ENST00000432425 ASLP04424 464 aa5.01□□□□□ -1.61
CLK1-204ENST00000432425 MMEP08473 750 aa5.01□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 58.1 ms