RNA–Protein interactions for RNA: ENST00000431429.1

HMGB1P27-201, Transcript of high mobility group box 1 pseudogene 27, humanhuman

BASIC

Gene HMGB1P27, Length 603 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P27-201ENST00000431429 MIB1Q86YT6 1006 aa4.25□□□□□ -1.73
HMGB1P27-201ENST00000431429 CMIPQ8IY22 773 aa4.25□□□□□ -1.73
HMGB1P27-201ENST00000431429 ZZZ3Q8IYH5 903 aa4.25□□□□□ -1.73
HMGB1P27-201ENST00000431429 FLAD1Q8NFF5 587 aa4.25□□□□□ -1.73
HMGB1P27-201ENST00000431429 FLCNQ8NFG4 579 aa4.25□□□□□ -1.73
HMGB1P27-201ENST00000431429 TSPAN17Q96FV3 270 aa4.25□□□□□ -1.73
HMGB1P27-201ENST00000431429 CCDC194A0A1B0GVG4 234 aa4.24□□□□□ -1.73
HMGB1P27-201ENST00000431429 LCHNA4D1U4 455 aa4.24□□□□□ -1.73
HMGB1P27-201ENST00000431429 PRPF3O43395 683 aaKnown RBP4.24□□□□□ -1.73
HMGB1P27-201ENST00000431429 HIP1RO75146 1068 aa4.24□□□□□ -1.73
HMGB1P27-201ENST00000431429 KRT37O76014 449 aa4.24□□□□□ -1.73
HMGB1P27-201ENST00000431429 CD40P25942 277 aa4.24□□□□□ -1.73
HMGB1P27-201ENST00000431429 SSTR4P31391 388 aa4.24□□□□□ -1.73
HMGB1P27-201ENST00000431429 TRHRP34981 398 aaPredicted RBP4.24□□□□□ -1.73
HMGB1P27-201ENST00000431429 PCBP2Q15366 365 aaKnown RBP eCLIP4.24□□□□□ -1.73
HMGB1P27-201ENST00000431429 PAQR3Q6TCH7 311 aa4.24□□□□□ -1.73
HMGB1P27-201ENST00000431429 TRIM48Q8IWZ4 208 aa4.24□□□□□ -1.73
HMGB1P27-201ENST00000431429 RBM12BQ8IXT5 1001 aaKnown RBP4.24□□□□□ -1.73
HMGB1P27-201ENST00000431429 CPA6Q8N4T0 437 aa4.24□□□□□ -1.73
HMGB1P27-201ENST00000431429 ARRDC4Q8NCT1 418 aa4.24□□□□□ -1.73
HMGB1P27-201ENST00000431429 AGBL5Q8NDL9 886 aa4.24□□□□□ -1.73
HMGB1P27-201ENST00000431429 ZNF496Q96IT1 587 aaPredicted RBP4.24□□□□□ -1.73
HMGB1P27-201ENST00000431429 FAXDC2Q96IV6 333 aa4.24□□□□□ -1.73
HMGB1P27-201ENST00000431429 C19orf44Q9H6X5 657 aa4.24□□□□□ -1.73
HMGB1P27-201ENST00000431429 ZNF277Q9NRM2 450 aaPredicted RBP4.24□□□□□ -1.73
HMGB1P27-201ENST00000431429 TOMM22Q9NS69 142 aa4.24□□□□□ -1.73
HMGB1P27-201ENST00000431429 BTBD7Q9P203 1132 aa4.24□□□□□ -1.73
HMGB1P27-201ENST00000431429 PALD1Q9ULE6 856 aa4.24□□□□□ -1.73
HMGB1P27-201ENST00000431429 YBX2Q9Y2T7 364 aaKnown RBP4.24□□□□□ -1.73
HMGB1P27-201ENST00000431429 SIT1Q9Y3P8 196 aa4.24□□□□□ -1.73
HMGB1P27-201ENST00000431429 NUB1Q9Y5A7 615 aa4.24□□□□□ -1.73
HMGB1P27-201ENST00000431429 PCDHB4Q9Y5E5 795 aa4.24□□□□□ -1.73
HMGB1P27-201ENST00000431429 H2AFYO75367 372 aaKnown RBP4.23□□□□□ -1.73
HMGB1P27-201ENST00000431429 ZRANB2O95218 330 aaKnown RBP eCLIP4.23□□□□□ -1.73
HMGB1P27-201ENST00000431429 ZBTB7AO95365 584 aa4.23□□□□□ -1.73
HMGB1P27-201ENST00000431429 MPIG6BO95866 241 aa4.23□□□□□ -1.73
HMGB1P27-201ENST00000431429 FAHP16930 419 aa4.23□□□□□ -1.73
HMGB1P27-201ENST00000431429 FBLN1P23142 703 aa4.23□□□□□ -1.73
HMGB1P27-201ENST00000431429 AOAHP28039 575 aa4.23□□□□□ -1.73
HMGB1P27-201ENST00000431429 MTNR1BP49286 362 aa4.23□□□□□ -1.73
HMGB1P27-201ENST00000431429 MANFP55145 182 aaKnown RBP4.23□□□□□ -1.73
HMGB1P27-201ENST00000431429 ODF1Q14990 250 aa4.23□□□□□ -1.73
HMGB1P27-201ENST00000431429 PTPN21Q16825 1174 aa4.23□□□□□ -1.73
HMGB1P27-201ENST00000431429 ZNF792Q3KQV3 632 aa4.23□□□□□ -1.73
HMGB1P27-201ENST00000431429 BTBD8Q5XKL5 378 aa4.23□□□□□ -1.73
HMGB1P27-201ENST00000431429 BICRALQ6AI39 1079 aa4.23□□□□□ -1.73
HMGB1P27-201ENST00000431429 CXorf57Q6NSI4 855 aaKnown RBP4.23□□□□□ -1.73
HMGB1P27-201ENST00000431429 FRMD7Q6ZUT3 714 aa4.23□□□□□ -1.73
HMGB1P27-201ENST00000431429 CBLL1Q75N03 491 aa4.23□□□□□ -1.73
HMGB1P27-201ENST00000431429 KANSL1Q7Z3B3 1105 aa4.23□□□□□ -1.73
HMGB1P27-201ENST00000431429 KCNK18Q7Z418 384 aa4.23□□□□□ -1.73
HMGB1P27-201ENST00000431429 CABP7Q86V35 215 aa4.23□□□□□ -1.73
HMGB1P27-201ENST00000431429 PROSER1Q86XN7 944 aa4.23□□□□□ -1.73
HMGB1P27-201ENST00000431429 SLC41A1Q8IVJ1 513 aa4.23□□□□□ -1.73
HMGB1P27-201ENST00000431429 CMTR2Q8IYT2 770 aaKnown RBP4.23□□□□□ -1.73
HMGB1P27-201ENST00000431429 CHPFQ8IZ52 775 aa4.23□□□□□ -1.73
HMGB1P27-201ENST00000431429 MAGEB6Q8N7X4 407 aa4.23□□□□□ -1.73
HMGB1P27-201ENST00000431429 TTC8Q8TAM2 541 aa4.23□□□□□ -1.73
HMGB1P27-201ENST00000431429 USP33Q8TEY7 942 aa4.23□□□□□ -1.73
HMGB1P27-201ENST00000431429 ASB15Q8WXK1 588 aa4.23□□□□□ -1.73
HMGB1P27-201ENST00000431429 PEX11GQ96HA9 241 aa4.23□□□□□ -1.73
HMGB1P27-201ENST00000431429 ACAP3Q96P50 834 aa4.23□□□□□ -1.73
HMGB1P27-201ENST00000431429 SEMA4AQ9H3S1 761 aa4.23□□□□□ -1.73
HMGB1P27-201ENST00000431429 PCIF1Q9H4Z3 704 aa4.23□□□□□ -1.73
HMGB1P27-201ENST00000431429 AASDHPPTQ9NRN7 309 aa4.23□□□□□ -1.73
HMGB1P27-201ENST00000431429 CCM2LQ9NUG4 571 aaPredicted RBP4.23□□□□□ -1.73
HMGB1P27-201ENST00000431429 TMPRSS11EQ9UL52 423 aa4.23□□□□□ -1.73
HMGB1P27-201ENST00000431429 PNMA8BQ9ULN7 279 aaPredicted RBP4.23□□□□□ -1.73
HMGB1P27-201ENST00000431429 ASB1Q9Y576 335 aa4.23□□□□□ -1.73
HMGB1P27-201ENST00000431429 WASHC2AQ641Q2 1341 aa4.22□□□□□ -1.73
HMGB1P27-201ENST00000431429 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP4.22□□□□□ -1.73
HMGB1P27-201ENST00000431429 GOLGA6L22H0YM25 854 aa4.22□□□□□ -1.73
HMGB1P27-201ENST00000431429 ELL2O00472 640 aaPredicted RBP4.22□□□□□ -1.73
HMGB1P27-201ENST00000431429 KIF3BO15066 747 aa4.22□□□□□ -1.73
HMGB1P27-201ENST00000431429 FOXP2O15409 715 aa4.22□□□□□ -1.73
HMGB1P27-201ENST00000431429 KDM1AO60341 852 aa4.22□□□□□ -1.73
HMGB1P27-201ENST00000431429 WNT11O96014 354 aa4.22□□□□□ -1.73
HMGB1P27-201ENST00000431429 MT-CO1P00395 513 aa4.22□□□□□ -1.73
HMGB1P27-201ENST00000431429 CFBP00751 764 aa4.22□□□□□ -1.73
HMGB1P27-201ENST00000431429 LRG1P02750 347 aa4.22□□□□□ -1.73
HMGB1P27-201ENST00000431429 MYBL2P10244 700 aa4.22□□□□□ -1.73
HMGB1P27-201ENST00000431429 ZSCAN20P17040 1043 aaPredicted RBP4.22□□□□□ -1.73
HMGB1P27-201ENST00000431429 GNALP38405 381 aa4.22□□□□□ -1.73
HMGB1P27-201ENST00000431429 RECQLP46063 649 aaPredicted RBP4.22□□□□□ -1.73
HMGB1P27-201ENST00000431429 MAPKAPK2P49137 400 aa4.22□□□□□ -1.73
HMGB1P27-201ENST00000431429 YBX1P67809 324 aaKnown RBP4.22□□□□□ -1.73
HMGB1P27-201ENST00000431429 ADCY1Q08828 1119 aa4.22□□□□□ -1.73
HMGB1P27-201ENST00000431429 SLC9A5Q14940 896 aa4.22□□□□□ -1.73
HMGB1P27-201ENST00000431429 NR1I3Q14994 352 aa4.22□□□□□ -1.73
HMGB1P27-201ENST00000431429 FSCN1Q16658 493 aaKnown RBP4.22□□□□□ -1.73
HMGB1P27-201ENST00000431429 PAN2Q504Q3 1202 aaKnown RBP4.22□□□□□ -1.73
HMGB1P27-201ENST00000431429 CCSAPQ6IQ19 270 aaPredicted RBP4.22□□□□□ -1.73
HMGB1P27-201ENST00000431429 CXorf67Q86X51 503 aaPredicted RBP4.22□□□□□ -1.73
HMGB1P27-201ENST00000431429 NME9Q86XW9 330 aa4.22□□□□□ -1.73
HMGB1P27-201ENST00000431429 LYSMD2Q8IV50 215 aa4.22□□□□□ -1.73
HMGB1P27-201ENST00000431429 FAM126BQ8IXS8 530 aa4.22□□□□□ -1.73
HMGB1P27-201ENST00000431429 MYO1HQ8N1T3 1032 aa4.22□□□□□ -1.73
HMGB1P27-201ENST00000431429 JPH3Q8WXH2 748 aaPredicted RBP4.22□□□□□ -1.73
HMGB1P27-201ENST00000431429 MYLIPQ8WY64 445 aa4.22□□□□□ -1.73
HMGB1P27-201ENST00000431429 SSH1Q8WYL5 1049 aa4.22□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms