RNA–Protein interactions for RNA: ENST00000431146.6

USHBP1-203, Transcript of USH1 protein network component harmonin binding protein 1, humanhuman

TSL 2 BASIC

Gene USHBP1, Length 2,136 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USHBP1-203ENST00000431146 EPHX2P34913 555 aa18.47■□□□□ 0.55
USHBP1-203ENST00000431146 KCNJ6P48051 423 aa18.47■□□□□ 0.55
USHBP1-203ENST00000431146 TTLL12Q14166 644 aaPredicted RBP18.47■□□□□ 0.55
USHBP1-203ENST00000431146 SH3D19Q5HYK7 790 aa18.47■□□□□ 0.55
USHBP1-203ENST00000431146 NIPA1Q7RTP0 329 aa18.47■□□□□ 0.55
USHBP1-203ENST00000431146 CDCA5Q96FF9 252 aa18.47■□□□□ 0.55
USHBP1-203ENST00000431146 PANX2Q96RD6 677 aa18.47■□□□□ 0.55
USHBP1-203ENST00000431146 HOXC10Q9NYD6 342 aa18.47■□□□□ 0.55
USHBP1-203ENST00000431146 PNMA2Q9UL42 364 aa18.47■□□□□ 0.55
USHBP1-203ENST00000431146 MYBP10242 640 aa18.47■□□□□ 0.55
USHBP1-203ENST00000431146 OAZ1P54368 228 aa18.47■□□□□ 0.55
USHBP1-203ENST00000431146 TBC1D8BQ0IIM8 1120 aa18.47■□□□□ 0.55
USHBP1-203ENST00000431146 EAPPQ56P03 285 aaPredicted RBP18.47■□□□□ 0.55
USHBP1-203ENST00000431146 GADL1Q6ZQY3 521 aa18.47■□□□□ 0.55
USHBP1-203ENST00000431146 TRMT1LQ7Z2T5 733 aaKnown RBP18.47■□□□□ 0.55
USHBP1-203ENST00000431146 RBM46Q8TBY0 533 aaKnown RBP18.47■□□□□ 0.55
USHBP1-203ENST00000431146 DESI2Q9BSY9 194 aa18.47■□□□□ 0.55
USHBP1-203ENST00000431146 A1CFQ9NQ94 594 aaKnown RBP18.47■□□□□ 0.55
USHBP1-203ENST00000431146 TBCAO75347 108 aaKnown RBP18.46■□□□□ 0.55
USHBP1-203ENST00000431146 TPM2P07951 284 aa18.46■□□□□ 0.55
USHBP1-203ENST00000431146 IREB2P48200 963 aaKnown RBP18.46■□□□□ 0.55
USHBP1-203ENST00000431146 DNM2P50570 870 aa18.46■□□□□ 0.55
USHBP1-203ENST00000431146 C1orf186Q6ZWK4 172 aa18.46■□□□□ 0.55
USHBP1-203ENST00000431146 CNGA4Q8IV77 575 aa18.46■□□□□ 0.55
USHBP1-203ENST00000431146 SAMD3Q8N6K7 520 aa18.46■□□□□ 0.55
USHBP1-203ENST00000431146 KCTD10Q9H3F6 313 aa18.46■□□□□ 0.55
USHBP1-203ENST00000431146 DOCK5Q9H7D0 1870 aa18.46■□□□□ 0.55
USHBP1-203ENST00000431146 MYH11P35749 1972 aa18.46■□□□□ 0.55
USHBP1-203ENST00000431146 TTC26A0AVF1 554 aa18.46■□□□□ 0.55
USHBP1-203ENST00000431146 PRPF6O94906 941 aaKnown RBP18.46■□□□□ 0.55
USHBP1-203ENST00000431146 NR3C2P08235 984 aa18.46■□□□□ 0.55
USHBP1-203ENST00000431146 TPM1P09493 284 aa18.46■□□□□ 0.55
USHBP1-203ENST00000431146 SYCP1Q15431 976 aa18.46■□□□□ 0.55
USHBP1-203ENST00000431146 NACC1Q96RE7 527 aa18.46■□□□□ 0.55
USHBP1-203ENST00000431146 ACAD9Q9H845 621 aa18.46■□□□□ 0.55
USHBP1-203ENST00000431146 MRPL44Q9H9J2 332 aaKnown RBP18.46■□□□□ 0.55
USHBP1-203ENST00000431146 ABHD10Q9NUJ1 306 aa18.46■□□□□ 0.55
USHBP1-203ENST00000431146 CYP39A1Q9NYL5 469 aa18.46■□□□□ 0.55
USHBP1-203ENST00000431146 LCTP09848 1927 aa18.45■□□□□ 0.54
USHBP1-203ENST00000431146 UQCRHLA0A096LP55 91 aa18.45■□□□□ 0.54
USHBP1-203ENST00000431146 UQCRHP07919 91 aa18.45■□□□□ 0.54
USHBP1-203ENST00000431146 KRT9P35527 623 aa18.45■□□□□ 0.54
USHBP1-203ENST00000431146 SH2D3AQ9BRG2 576 aa18.45■□□□□ 0.54
USHBP1-203ENST00000431146 PPP2R2CQ9Y2T4 447 aa18.45■□□□□ 0.54
USHBP1-203ENST00000431146 A0A1W2PQC6 194 aa18.44■□□□□ 0.54
USHBP1-203ENST00000431146 ATP2A1O14983 1001 aa18.44■□□□□ 0.54
USHBP1-203ENST00000431146 HOXD13P35453 343 aa18.44■□□□□ 0.54
USHBP1-203ENST00000431146 FKBP3Q00688 224 aaKnown RBP18.44■□□□□ 0.54
USHBP1-203ENST00000431146 KCNA1Q09470 495 aa18.44■□□□□ 0.54
USHBP1-203ENST00000431146 GPR162Q16538 588 aa18.44■□□□□ 0.54
USHBP1-203ENST00000431146 RAD9BQ6WBX8 426 aa18.44■□□□□ 0.54
USHBP1-203ENST00000431146 L3MBTL3Q96JM7 780 aaPredicted RBP18.44■□□□□ 0.54
USHBP1-203ENST00000431146 PCMTD1Q96MG8 357 aaPredicted RBP18.44■□□□□ 0.54
USHBP1-203ENST00000431146 RASSF10A6NK89 507 aa18.44■□□□□ 0.54
USHBP1-203ENST00000431146 FAM13AO94988 1023 aa18.44■□□□□ 0.54
USHBP1-203ENST00000431146 GCNT3O95395 438 aa18.44■□□□□ 0.54
USHBP1-203ENST00000431146 FGFR1OPO95684 399 aaKnown RBP18.44■□□□□ 0.54
USHBP1-203ENST00000431146 CCND2P30279 289 aa18.44■□□□□ 0.54
USHBP1-203ENST00000431146 HOXA7P31268 230 aaPredicted RBP18.44■□□□□ 0.54
USHBP1-203ENST00000431146 VWA3BQ502W6 1294 aa18.44■□□□□ 0.54
USHBP1-203ENST00000431146 USP50Q70EL3 339 aaPredicted RBP18.44■□□□□ 0.54
USHBP1-203ENST00000431146 VSIG10LQ86VR7 867 aa18.44■□□□□ 0.54
USHBP1-203ENST00000431146 REXO1L1PQ8IX06 675 aa18.44■□□□□ 0.54
USHBP1-203ENST00000431146 MYCT1Q8N699 235 aa18.44■□□□□ 0.54
USHBP1-203ENST00000431146 BTBD7Q9P203 1132 aa18.44■□□□□ 0.54
USHBP1-203ENST00000431146 COL4A3BPQ9Y5P4 624 aa18.44■□□□□ 0.54
USHBP1-203ENST00000431146 TMEM150BA6NC51 233 aa18.43■□□□□ 0.54
USHBP1-203ENST00000431146 SORBS3O60504 671 aa18.43■□□□□ 0.54
USHBP1-203ENST00000431146 CCNE2O96020 404 aa18.43■□□□□ 0.54
USHBP1-203ENST00000431146 P4HBP07237 508 aaKnown RBP18.43■□□□□ 0.54
USHBP1-203ENST00000431146 NMT1P30419 496 aaKnown RBP18.43■□□□□ 0.54
USHBP1-203ENST00000431146 TRIM14Q14142 442 aa18.43■□□□□ 0.54
USHBP1-203ENST00000431146 UGCGQ16739 394 aa18.43■□□□□ 0.54
USHBP1-203ENST00000431146 MAEAQ7L5Y9 396 aa18.43■□□□□ 0.54
USHBP1-203ENST00000431146 EPM2AIP1Q7L775 607 aaPredicted RBP18.43■□□□□ 0.54
USHBP1-203ENST00000431146 NSUN6Q8TEA1 469 aaKnown RBP18.43■□□□□ 0.54
USHBP1-203ENST00000431146 PRIMPOLQ96LW4 560 aa18.43■□□□□ 0.54
USHBP1-203ENST00000431146 IKZF4Q9H2S9 585 aa18.43■□□□□ 0.54
USHBP1-203ENST00000431146 NDST4Q9H3R1 872 aa18.43■□□□□ 0.54
USHBP1-203ENST00000431146 TBC1D22BQ9NU19 505 aa18.43■□□□□ 0.54
USHBP1-203ENST00000431146 ERVK-24P63145 666 aa18.43■□□□□ 0.54
USHBP1-203ENST00000431146 CCDC40Q4G0X9 1142 aa18.43■□□□□ 0.54
USHBP1-203ENST00000431146 KCTD17Q8N5Z5 321 aa18.43■□□□□ 0.54
USHBP1-203ENST00000431146 CCDC155Q8N6L0 562 aa18.43■□□□□ 0.54
USHBP1-203ENST00000431146 AGPAT5Q9NUQ2 364 aa18.43■□□□□ 0.54
USHBP1-203ENST00000431146 LOXHD1Q8IVV2 1947 aa18.42■□□□□ 0.54
USHBP1-203ENST00000431146 ARHGEF35A5YM69 484 aa18.42■□□□□ 0.54
USHBP1-203ENST00000431146 RIOK3O14730 519 aaKnown RBP18.42■□□□□ 0.54
USHBP1-203ENST00000431146 RGS20O76081 388 aa18.42■□□□□ 0.54
USHBP1-203ENST00000431146 KIF20AO95235 890 aa18.42■□□□□ 0.54
USHBP1-203ENST00000431146 TRIM21P19474 475 aaKnown RBP18.42■□□□□ 0.54
USHBP1-203ENST00000431146 MUTP22033 750 aa18.42■□□□□ 0.54
USHBP1-203ENST00000431146 NF2P35240 595 aa18.42■□□□□ 0.54
USHBP1-203ENST00000431146 MAN2A1Q16706 1144 aa18.42■□□□□ 0.54
USHBP1-203ENST00000431146 KNOP1Q1ED39 458 aaKnown RBP18.42■□□□□ 0.54
USHBP1-203ENST00000431146 ZC2HC1CQ53FD0 456 aaPredicted RBP18.42■□□□□ 0.54
USHBP1-203ENST00000431146 KSR1Q8IVT5 923 aa18.42■□□□□ 0.54
USHBP1-203ENST00000431146 ANKRD13AQ8IZ07 590 aa18.42■□□□□ 0.54
USHBP1-203ENST00000431146 ZSWIM4Q9H7M6 989 aa18.42■□□□□ 0.54
USHBP1-203ENST00000431146 TELO2Q9Y4R8 837 aa18.42■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms