RNA–Protein interactions for RNA: ENST00000430976.5

PTPN4-203, Transcript of protein tyrosine phosphatase, non-receptor type 4, humanhuman

TSL 5

Gene PTPN4, Length 4,154 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN4-203ENST00000430976 TMEM232C9JQI7 657 aa5.81□□□□□ -1.48
PTPN4-203ENST00000430976 H3BUI4 141 aa5.81□□□□□ -1.48
PTPN4-203ENST00000430976 UBXN8O00124 270 aa5.81□□□□□ -1.48
PTPN4-203ENST00000430976 MYO1FO00160 1098 aa5.81□□□□□ -1.48
PTPN4-203ENST00000430976 KRT86O43790 486 aa5.81□□□□□ -1.48
PTPN4-203ENST00000430976 CYP2E1P05181 493 aaPredicted RBP5.81□□□□□ -1.48
PTPN4-203ENST00000430976 SKIP12755 728 aa5.81□□□□□ -1.48
PTPN4-203ENST00000430976 OTUD4Q01804 1114 aaKnown RBP5.81□□□□□ -1.48
PTPN4-203ENST00000430976 TKFCQ3LXA3 575 aa5.81□□□□□ -1.48
PTPN4-203ENST00000430976 ANKRD20A4Q4UJ75 823 aa5.81□□□□□ -1.48
PTPN4-203ENST00000430976 ANKRD20A1Q5TYW2 823 aa5.81□□□□□ -1.48
PTPN4-203ENST00000430976 KLC3Q6P597 504 aa5.81□□□□□ -1.48
PTPN4-203ENST00000430976 KDELC2Q7Z4H8 507 aa5.81□□□□□ -1.48
PTPN4-203ENST00000430976 HEATR4Q86WZ0 1026 aa5.81□□□□□ -1.48
PTPN4-203ENST00000430976 CHERPQ8IWX8 916 aaKnown RBP5.81□□□□□ -1.48
PTPN4-203ENST00000430976 OR8H1Q8NGG4 311 aa5.81□□□□□ -1.48
PTPN4-203ENST00000430976 RNF139Q8WU17 664 aa5.81□□□□□ -1.48
PTPN4-203ENST00000430976 FATE1Q969F0 183 aa5.81□□□□□ -1.48
PTPN4-203ENST00000430976 SYTL4Q96C24 671 aaPredicted RBP5.81□□□□□ -1.48
PTPN4-203ENST00000430976 GDAP1L1Q96MZ0 367 aa5.81□□□□□ -1.48
PTPN4-203ENST00000430976 ANKRD27Q96NW4 1050 aa5.81□□□□□ -1.48
PTPN4-203ENST00000430976 RHBGQ9H310 441 aa5.81□□□□□ -1.48
PTPN4-203ENST00000430976 LY9Q9HBG7 655 aa5.81□□□□□ -1.48
PTPN4-203ENST00000430976 TCF7L2Q9NQB0 619 aa5.81□□□□□ -1.48
PTPN4-203ENST00000430976 KCND1Q9NSA2 647 aa5.81□□□□□ -1.48
PTPN4-203ENST00000430976 BLOC1S4Q9NUP1 217 aa5.81□□□□□ -1.48
PTPN4-203ENST00000430976 STX8Q9UNK0 236 aa5.81□□□□□ -1.48
PTPN4-203ENST00000430976 GOLGA8CPA6NN73 597 aa5.8□□□□□ -1.48
PTPN4-203ENST00000430976 HDAC3O15379 428 aa5.8□□□□□ -1.48
PTPN4-203ENST00000430976 CPA3P15088 417 aa5.8□□□□□ -1.48
PTPN4-203ENST00000430976 SFPQP23246 707 aaKnown RBP eCLIP5.8□□□□□ -1.48
PTPN4-203ENST00000430976 DIO1P49895 249 aa5.8□□□□□ -1.48
PTPN4-203ENST00000430976 ST13P50502 369 aaKnown RBP5.8□□□□□ -1.48
PTPN4-203ENST00000430976 CARD18P57730 90 aa5.8□□□□□ -1.48
PTPN4-203ENST00000430976 C21orf58P58505 322 aa5.8□□□□□ -1.48
PTPN4-203ENST00000430976 MLC1Q15049 377 aa5.8□□□□□ -1.48
PTPN4-203ENST00000430976 CYTH1Q15438 398 aa5.8□□□□□ -1.48
PTPN4-203ENST00000430976 RASIP1Q5U651 963 aa5.8□□□□□ -1.48
PTPN4-203ENST00000430976 RAB12Q6IQ22 244 aa5.8□□□□□ -1.48
PTPN4-203ENST00000430976 TMEM154Q6P9G4 183 aa5.8□□□□□ -1.48
PTPN4-203ENST00000430976 C3orf67Q6ZVT6 689 aa5.8□□□□□ -1.48
PTPN4-203ENST00000430976 HOMER1Q86YM7 354 aa5.8□□□□□ -1.48
PTPN4-203ENST00000430976 NOSTRINQ8IVI9 506 aa5.8□□□□□ -1.48
PTPN4-203ENST00000430976 ABTB2Q8N961 1025 aa5.8□□□□□ -1.48
PTPN4-203ENST00000430976 PJA1Q8NG27 643 aa5.8□□□□□ -1.48
PTPN4-203ENST00000430976 SPATA18Q8TC71 538 aa5.8□□□□□ -1.48
PTPN4-203ENST00000430976 SMG7Q92540 1137 aaKnown RBP5.8□□□□□ -1.48
PTPN4-203ENST00000430976 ARHGAP45Q92619 1136 aa5.8□□□□□ -1.48
PTPN4-203ENST00000430976 FERMT2Q96AC1 680 aa5.8□□□□□ -1.48
PTPN4-203ENST00000430976 RIOK1Q9BRS2 568 aaKnown RBP5.8□□□□□ -1.48
PTPN4-203ENST00000430976 CCDC28BQ9BUN5 200 aa5.8□□□□□ -1.48
PTPN4-203ENST00000430976 EHD1Q9H4M9 534 aa5.8□□□□□ -1.48
PTPN4-203ENST00000430976 GPR108Q9NPR9 543 aa5.8□□□□□ -1.48
PTPN4-203ENST00000430976 DDX28Q9NUL7 540 aaKnown RBP5.8□□□□□ -1.48
PTPN4-203ENST00000430976 DPP7Q9UHL4 492 aa5.8□□□□□ -1.48
PTPN4-203ENST00000430976 ARHGEF37A1IGU5 675 aa5.8□□□□□ -1.48
PTPN4-203ENST00000430976 TMEM88BA6NKF7 163 aa5.8□□□□□ -1.48
PTPN4-203ENST00000430976 LRRIQ3A6PVS8 624 aaPredicted RBP5.8□□□□□ -1.48
PTPN4-203ENST00000430976 B4E1Z4 1266 aa5.8□□□□□ -1.48
PTPN4-203ENST00000430976 IFIT3O14879 490 aaKnown RBP5.8□□□□□ -1.48
PTPN4-203ENST00000430976 ATP2C2O75185 946 aa5.8□□□□□ -1.48
PTPN4-203ENST00000430976 CFBP00751 764 aa5.8□□□□□ -1.48
PTPN4-203ENST00000430976 ESRRAP11474 423 aaPredicted RBP5.8□□□□□ -1.48
PTPN4-203ENST00000430976 APEHP13798 732 aaKnown RBP5.8□□□□□ -1.48
PTPN4-203ENST00000430976 AKR1B1P15121 316 aa5.8□□□□□ -1.48
PTPN4-203ENST00000430976 ZNF76P36508 570 aa5.8□□□□□ -1.48
PTPN4-203ENST00000430976 MADCAM1Q13477 382 aa5.8□□□□□ -1.48
PTPN4-203ENST00000430976 NFE2L1Q14494 772 aa5.8□□□□□ -1.48
PTPN4-203ENST00000430976 CFAP100Q494V2 611 aa5.8□□□□□ -1.48
PTPN4-203ENST00000430976 SGO1Q5FBB7 561 aa5.8□□□□□ -1.48
PTPN4-203ENST00000430976 HAUS3Q68CZ6 603 aa5.8□□□□□ -1.48
PTPN4-203ENST00000430976 RCSD1Q6JBY9 416 aa5.8□□□□□ -1.48
PTPN4-203ENST00000430976 TMEM214Q6NUQ4 689 aaKnown RBP5.8□□□□□ -1.48
PTPN4-203ENST00000430976 ZNF366Q8N895 744 aa5.8□□□□□ -1.48
PTPN4-203ENST00000430976 CAGE1Q8TC20 777 aa5.8□□□□□ -1.48
PTPN4-203ENST00000430976 WDR60Q8WVS4 1066 aa5.8□□□□□ -1.48
PTPN4-203ENST00000430976 POF1BQ8WVV4 589 aa5.8□□□□□ -1.48
PTPN4-203ENST00000430976 HNRNPABQ99729 332 aaKnown RBP5.8□□□□□ -1.48
PTPN4-203ENST00000430976 UNKQ9C0B0 810 aaKnown RBP5.8□□□□□ -1.48
PTPN4-203ENST00000430976 ATP6V0A4Q9HBG4 840 aa5.8□□□□□ -1.48
PTPN4-203ENST00000430976 SPEF1Q9Y4P9 236 aa5.8□□□□□ -1.48
PTPN4-203ENST00000430976 NCAPD3P42695 1498 aa5.8□□□□□ -1.48
PTPN4-203ENST00000430976 APAF1O14727 1248 aa5.8□□□□□ -1.48
PTPN4-203ENST00000430976 FBXO21O94952 628 aa5.8□□□□□ -1.48
PTPN4-203ENST00000430976 GNRH1P01148 92 aa5.8□□□□□ -1.48
PTPN4-203ENST00000430976 RAC2P15153 192 aa5.8□□□□□ -1.48
PTPN4-203ENST00000430976 MX2P20592 715 aa5.8□□□□□ -1.48
PTPN4-203ENST00000430976 CRTC2Q53ET0 693 aaPredicted RBP5.8□□□□□ -1.48
PTPN4-203ENST00000430976 OLFML2BQ68BL8 750 aa5.8□□□□□ -1.48
PTPN4-203ENST00000430976 CREB3L3Q68CJ9 461 aa5.8□□□□□ -1.48
PTPN4-203ENST00000430976 KCTD16Q68DU8 428 aa5.8□□□□□ -1.48
PTPN4-203ENST00000430976 SLC2A7Q6PXP3 512 aa5.8□□□□□ -1.48
PTPN4-203ENST00000430976 KRT74Q7RTS7 529 aa5.8□□□□□ -1.48
PTPN4-203ENST00000430976 SRGAP1Q7Z6B7 1085 aa5.8□□□□□ -1.48
PTPN4-203ENST00000430976 POMGNT1Q8WZA1 660 aa5.8□□□□□ -1.48
PTPN4-203ENST00000430976 HERVK_113Q902F9 699 aa5.8□□□□□ -1.48
PTPN4-203ENST00000430976 TNFRSF25Q93038 417 aa5.8□□□□□ -1.48
PTPN4-203ENST00000430976 RNF34Q969K3 372 aa5.8□□□□□ -1.48
PTPN4-203ENST00000430976 EMID1Q96A84 441 aaPredicted RBP5.8□□□□□ -1.48
PTPN4-203ENST00000430976 CMTM3Q96MX0 182 aa5.8□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms