RNA–Protein interactions for RNA: ENST00000429846.1

MSH5-208, Transcript of mutS homolog 5, humanhuman

TSL 3

Gene MSH5, Length 616 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-208ENST00000429846 KCNH7Q9NS40 1196 aa17.03■□□□□ 0.32
MSH5-208ENST00000429846 PKD2L1Q9P0L9 805 aa17.03■□□□□ 0.32
MSH5-208ENST00000429846 TTC3P53804 2025 aa17.03■□□□□ 0.32
MSH5-208ENST00000429846 ZBTB43O43298 467 aa17.02■□□□□ 0.32
MSH5-208ENST00000429846 ADCY7P51828 1080 aa17.02■□□□□ 0.32
MSH5-208ENST00000429846 EXOSC10Q01780 885 aaKnown RBP17.02■□□□□ 0.32
MSH5-208ENST00000429846 AP3B2Q13367 1082 aa17.02■□□□□ 0.32
MSH5-208ENST00000429846 GPM6BQ13491 265 aa17.02■□□□□ 0.32
MSH5-208ENST00000429846 KRT32Q14532 448 aa17.02■□□□□ 0.32
MSH5-208ENST00000429846 LPIN1Q14693 890 aa17.02■□□□□ 0.32
MSH5-208ENST00000429846 RTN1Q16799 776 aa17.02■□□□□ 0.32
MSH5-208ENST00000429846 LEXMQ3ZCV2 418 aa17.02■□□□□ 0.32
MSH5-208ENST00000429846 MARCH8Q5T0T0 291 aa17.02■□□□□ 0.32
MSH5-208ENST00000429846 TSHZ1Q6ZSZ6 1077 aa17.02■□□□□ 0.32
MSH5-208ENST00000429846 CENPQQ7L2Z9 268 aaPredicted RBP17.02■□□□□ 0.32
MSH5-208ENST00000429846 DHX32Q7L7V1 743 aaKnown RBP17.02■□□□□ 0.32
MSH5-208ENST00000429846 SQORQ9Y6N5 450 aa17.02■□□□□ 0.32
MSH5-208ENST00000429846 ADGRA3Q8IWK6 1321 aa17.01■□□□□ 0.31
MSH5-208ENST00000429846 C5orf67F2Z3F1 127 aa17.01■□□□□ 0.31
MSH5-208ENST00000429846 M0QZ92 97 aa17.01■□□□□ 0.31
MSH5-208ENST00000429846 FUT2Q10981 343 aa17.01■□□□□ 0.31
MSH5-208ENST00000429846 CEP55Q53EZ4 464 aa17.01■□□□□ 0.31
MSH5-208ENST00000429846 FBXO47Q5MNV8 452 aa17.01■□□□□ 0.31
MSH5-208ENST00000429846 IER5Q5VY09 327 aa17.01■□□□□ 0.31
MSH5-208ENST00000429846 PLPPR4Q7Z2D5 763 aa17.01■□□□□ 0.31
MSH5-208ENST00000429846 FIBCD1Q8N539 461 aa17.01■□□□□ 0.31
MSH5-208ENST00000429846 DNAJB3Q8WWF6 145 aa17.01■□□□□ 0.31
MSH5-208ENST00000429846 ANO3Q9BYT9 981 aa17.01■□□□□ 0.31
MSH5-208ENST00000429846 RC3H2Q9HBD1 1191 aaKnown RBP17.01■□□□□ 0.31
MSH5-208ENST00000429846 CDY2AQ9Y6F7 541 aa17.01■□□□□ 0.31
MSH5-208ENST00000429846 ATG2AQ2TAZ0 1938 aa17■□□□□ 0.31
MSH5-208ENST00000429846 LOXHD1Q8IVV2 1947 aa17■□□□□ 0.31
MSH5-208ENST00000429846 RBAK-RBAKDNI3L0D1 243 aa17■□□□□ 0.31
MSH5-208ENST00000429846 RB1P06400 928 aa17■□□□□ 0.31
MSH5-208ENST00000429846 HMGB1P09429 215 aaKnown RBP17■□□□□ 0.31
MSH5-208ENST00000429846 INSRRP14616 1297 aa17■□□□□ 0.31
MSH5-208ENST00000429846 KCNA5P22460 613 aa17■□□□□ 0.31
MSH5-208ENST00000429846 SREBF1P36956 1147 aa17■□□□□ 0.31
MSH5-208ENST00000429846 SLC26A2P50443 739 aa17■□□□□ 0.31
MSH5-208ENST00000429846 ACTR2P61160 394 aa17■□□□□ 0.31
MSH5-208ENST00000429846 MRPS6P82932 125 aaKnown RBP17■□□□□ 0.31
MSH5-208ENST00000429846 PUS10Q3MIT2 529 aaKnown RBP17■□□□□ 0.31
MSH5-208ENST00000429846 TYW1BQ6NUM6 668 aa17■□□□□ 0.31
MSH5-208ENST00000429846 FAM43BQ6ZT52 329 aaPredicted RBP17■□□□□ 0.31
MSH5-208ENST00000429846 BANK1Q8NDB2 785 aa17■□□□□ 0.31
MSH5-208ENST00000429846 PCYT2Q99447 389 aa17■□□□□ 0.31
MSH5-208ENST00000429846 C11orf84Q9BUA3 381 aaPredicted RBP17■□□□□ 0.31
MSH5-208ENST00000429846 FTHL17Q9BXU8 183 aa17■□□□□ 0.31
MSH5-208ENST00000429846 LMAN2LQ9H0V9 348 aa17■□□□□ 0.31
MSH5-208ENST00000429846 NSUN3Q9H649 340 aaKnown RBP17■□□□□ 0.31
MSH5-208ENST00000429846 BARHL2Q9NY43 387 aa17■□□□□ 0.31
MSH5-208ENST00000429846 TRPC6Q9Y210 931 aa17■□□□□ 0.31
MSH5-208ENST00000429846 SMCO2A6NFE2 343 aa16.99■□□□□ 0.31
MSH5-208ENST00000429846 GOLGA8AA7E2F4 631 aa16.99■□□□□ 0.31
MSH5-208ENST00000429846 GOLGA8BA8MQT2 603 aa16.99■□□□□ 0.31
MSH5-208ENST00000429846 STXBP3O00186 592 aa16.99■□□□□ 0.31
MSH5-208ENST00000429846 CTNNB1P35222 781 aa16.99■□□□□ 0.31
MSH5-208ENST00000429846 CLK2P49760 499 aaKnown RBP16.99■□□□□ 0.31
MSH5-208ENST00000429846 STAT5BP51692 787 aa16.99■□□□□ 0.31
MSH5-208ENST00000429846 IGBP1P78318 339 aa16.99■□□□□ 0.31
MSH5-208ENST00000429846 NIPA1Q7RTP0 329 aa16.99■□□□□ 0.31
MSH5-208ENST00000429846 CLP1Q92989 425 aaKnown RBP16.99■□□□□ 0.31
MSH5-208ENST00000429846 TCEANC2Q96MN5 208 aa16.99■□□□□ 0.31
MSH5-208ENST00000429846 BRPF3Q9ULD4 1205 aa16.99■□□□□ 0.31
MSH5-208ENST00000429846 TRPV2Q9Y5S1 764 aa16.99■□□□□ 0.31
MSH5-208ENST00000429846 V9GY48 417 aaPredicted RBP16.99■□□□□ 0.31
MSH5-208ENST00000429846 KLF18A0A0U1RQI7 1052 aa16.98■□□□□ 0.31
MSH5-208ENST00000429846 CCDC196A0A1B0GTZ2 297 aa16.98■□□□□ 0.31
MSH5-208ENST00000429846 MEIS1O00470 390 aa16.98■□□□□ 0.31
MSH5-208ENST00000429846 ENPP3O14638 875 aa16.98■□□□□ 0.31
MSH5-208ENST00000429846 NCK2O43639 380 aa16.98■□□□□ 0.31
MSH5-208ENST00000429846 CDC45O75419 566 aa16.98■□□□□ 0.31
MSH5-208ENST00000429846 ATG7O95352 703 aa16.98■□□□□ 0.31
MSH5-208ENST00000429846 BMPR1AP36894 532 aa16.98■□□□□ 0.31
MSH5-208ENST00000429846 COL19A1Q14993 1142 aa16.98■□□□□ 0.31
MSH5-208ENST00000429846 PLCB4Q15147 1175 aa16.98■□□□□ 0.31
MSH5-208ENST00000429846 ADCK5Q3MIX3 580 aa16.98■□□□□ 0.31
MSH5-208ENST00000429846 GADD45GIP1Q8TAE8 222 aaPredicted RBP16.98■□□□□ 0.31
MSH5-208ENST00000429846 CYP2W1Q8TAV3 490 aa16.98■□□□□ 0.31
MSH5-208ENST00000429846 NEK9Q8TD19 979 aa16.98■□□□□ 0.31
MSH5-208ENST00000429846 ZNF689Q96CS4 500 aaPredicted RBP16.98■□□□□ 0.31
MSH5-208ENST00000429846 PABPC5Q96DU9 382 aaKnown RBP16.98■□□□□ 0.31
MSH5-208ENST00000429846 FAM49AQ9H0Q0 323 aaPredicted RBP16.98■□□□□ 0.31
MSH5-208ENST00000429846 AGO4Q9HCK5 861 aaKnown RBP16.98■□□□□ 0.31
MSH5-208ENST00000429846 PCDHA2Q9Y5H9 948 aa16.98■□□□□ 0.31
MSH5-208ENST00000429846 IGSF9BQ9UPX0 1349 aa16.97■□□□□ 0.31
MSH5-208ENST00000429846 KDM3AQ9Y4C1 1321 aa16.97■□□□□ 0.31
MSH5-208ENST00000429846 SMIM35A0A1B0GVV1 85 aa16.97■□□□□ 0.31
MSH5-208ENST00000429846 POTEB3A0JP26 581 aa16.97■□□□□ 0.31
MSH5-208ENST00000429846 LINC00271P0C7V0 271 aa16.97■□□□□ 0.31
MSH5-208ENST00000429846 ARP10275 920 aa16.97■□□□□ 0.31
MSH5-208ENST00000429846 ITGB3BPQ13352 177 aaPredicted RBP16.97■□□□□ 0.31
MSH5-208ENST00000429846 TCEAL5Q5H9L2 206 aa16.97■□□□□ 0.31
MSH5-208ENST00000429846 MCTP2Q6DN12 878 aa16.97■□□□□ 0.31
MSH5-208ENST00000429846 PTCRAQ6ISU1 281 aaPredicted RBP16.97■□□□□ 0.31
MSH5-208ENST00000429846 POTEBQ6S5H4 581 aa16.97■□□□□ 0.31
MSH5-208ENST00000429846 FAM178BQ8IXR5 827 aa16.97■□□□□ 0.31
MSH5-208ENST00000429846 RASEFQ8IZ41 740 aa16.97■□□□□ 0.31
MSH5-208ENST00000429846 NME8Q8N427 588 aa16.97■□□□□ 0.31
MSH5-208ENST00000429846 PGBD1Q96JS3 809 aa16.97■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms