RNA–Protein interactions for RNA: ENST00000428983.2

PCDH8P1-201, Transcript of protocadherin 8 pseudogene 1, humanhuman

BASIC

Gene PCDH8P1, Length 2,773 nt, Biotype transcribed processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH8P1-201ENST00000428983 KRT27Q7Z3Y8 459 aa18.52■□□□□ 0.56
PCDH8P1-201ENST00000428983 NOC3LQ8WTT2 800 aaKnown RBP18.52■□□□□ 0.56
PCDH8P1-201ENST00000428983 TANGO6Q9C0B7 1094 aa18.52■□□□□ 0.56
PCDH8P1-201ENST00000428983 NLRC4Q9NPP4 1024 aa18.52■□□□□ 0.56
PCDH8P1-201ENST00000428983 GDF3Q9NR23 364 aa18.52■□□□□ 0.56
PCDH8P1-201ENST00000428983 KIAA1024Q9UPX6 916 aa18.52■□□□□ 0.56
PCDH8P1-201ENST00000428983 SMCHD1A6NHR9 2005 aa18.52■□□□□ 0.56
PCDH8P1-201ENST00000428983 SNHG28P0DPA3 235 aa18.52■□□□□ 0.55
PCDH8P1-201ENST00000428983 CHRNA5P30532 468 aa18.52■□□□□ 0.55
PCDH8P1-201ENST00000428983 NOVP48745 357 aa18.52■□□□□ 0.55
PCDH8P1-201ENST00000428983 IKQ13123 557 aaPredicted RBP18.52■□□□□ 0.55
PCDH8P1-201ENST00000428983 KRT79Q5XKE5 535 aa18.52■□□□□ 0.55
PCDH8P1-201ENST00000428983 MAATS1Q7Z4T9 603 aa18.52■□□□□ 0.55
PCDH8P1-201ENST00000428983 TEKT1Q969V4 418 aa18.52■□□□□ 0.55
PCDH8P1-201ENST00000428983 VWA3BQ502W6 1294 aa18.51■□□□□ 0.55
PCDH8P1-201ENST00000428983 CEP85LQ5SZL2 805 aa18.51■□□□□ 0.55
PCDH8P1-201ENST00000428983 RAD54LQ92698 747 aa18.51■□□□□ 0.55
PCDH8P1-201ENST00000428983 ZKSCAN4Q969J2 545 aaPredicted RBP18.51■□□□□ 0.55
PCDH8P1-201ENST00000428983 PCDHA12Q9UN75 941 aa18.51■□□□□ 0.55
PCDH8P1-201ENST00000428983 PCDHA1Q9Y5I3 950 aa18.51■□□□□ 0.55
PCDH8P1-201ENST00000428983 BICDL2A1A5D9 508 aa18.51■□□□□ 0.55
PCDH8P1-201ENST00000428983 HNRNPH3P31942 346 aaKnown RBP18.51■□□□□ 0.55
PCDH8P1-201ENST00000428983 MDH1P40925 334 aaKnown RBP18.51■□□□□ 0.55
PCDH8P1-201ENST00000428983 TMEM266Q2M3C6 531 aa18.51■□□□□ 0.55
PCDH8P1-201ENST00000428983 CFAP221Q4G0U5 840 aa18.51■□□□□ 0.55
PCDH8P1-201ENST00000428983 TDRD12Q587J7 1177 aaKnown RBP18.51■□□□□ 0.55
PCDH8P1-201ENST00000428983 FIGNQ5HY92 759 aa18.51■□□□□ 0.55
PCDH8P1-201ENST00000428983 CNNM4Q6P4Q7 775 aa18.51■□□□□ 0.55
PCDH8P1-201ENST00000428983 KLHL7Q8IXQ5 586 aa18.51■□□□□ 0.55
PCDH8P1-201ENST00000428983 CCDC13Q8IYE1 715 aa18.51■□□□□ 0.55
PCDH8P1-201ENST00000428983 CCDC47Q96A33 483 aaKnown RBP18.51■□□□□ 0.55
PCDH8P1-201ENST00000428983 SPATA31A6Q5VVP1 1343 aa18.5■□□□□ 0.55
PCDH8P1-201ENST00000428983 PALMO75781 387 aa18.5■□□□□ 0.55
PCDH8P1-201ENST00000428983 HOXA13P31271 388 aaPredicted RBP18.5■□□□□ 0.55
PCDH8P1-201ENST00000428983 AMPD3Q01432 767 aa18.5■□□□□ 0.55
PCDH8P1-201ENST00000428983 EP400NLQ6ZTU2 488 aa18.5■□□□□ 0.55
PCDH8P1-201ENST00000428983 DNAAF5Q86Y56 855 aa18.5■□□□□ 0.55
PCDH8P1-201ENST00000428983 CYP2W1Q8TAV3 490 aa18.5■□□□□ 0.55
PCDH8P1-201ENST00000428983 PLAAQ9Y263 795 aa18.5■□□□□ 0.55
PCDH8P1-201ENST00000428983 ZBTB5O15062 677 aa18.5■□□□□ 0.55
PCDH8P1-201ENST00000428983 ONECUT3O60422 494 aaPredicted RBP18.5■□□□□ 0.55
PCDH8P1-201ENST00000428983 FAM114A1Q8IWE2 563 aa18.5■□□□□ 0.55
PCDH8P1-201ENST00000428983 BAP1Q92560 729 aa18.5■□□□□ 0.55
PCDH8P1-201ENST00000428983 CUL5Q93034 780 aa18.5■□□□□ 0.55
PCDH8P1-201ENST00000428983 ATP6V1G3Q96LB4 118 aa18.5■□□□□ 0.55
PCDH8P1-201ENST00000428983 NOX5Q96PH1 765 aa18.5■□□□□ 0.55
PCDH8P1-201ENST00000428983 TDRD3Q9H7E2 651 aaKnown RBP18.5■□□□□ 0.55
PCDH8P1-201ENST00000428983 RIC8AQ9NPQ8 531 aa18.5■□□□□ 0.55
PCDH8P1-201ENST00000428983 MYH7BA7E2Y1 1941 aa18.5■□□□□ 0.55
PCDH8P1-201ENST00000428983 LCA5LO95447 670 aa18.49■□□□□ 0.55
PCDH8P1-201ENST00000428983 PSMC6P62333 389 aa18.49■□□□□ 0.55
PCDH8P1-201ENST00000428983 CENPPQ6IPU0 288 aa18.49■□□□□ 0.55
PCDH8P1-201ENST00000428983 SIAH1Q8IUQ4 282 aa18.49■□□□□ 0.55
PCDH8P1-201ENST00000428983 KLC4Q9NSK0 619 aa18.49■□□□□ 0.55
PCDH8P1-201ENST00000428983 FAM198AQ9UFP1 575 aa18.49■□□□□ 0.55
PCDH8P1-201ENST00000428983 POTEFA5A3E0 1075 aa18.49■□□□□ 0.55
PCDH8P1-201ENST00000428983 POTEIP0CG38 1075 aa18.49■□□□□ 0.55
PCDH8P1-201ENST00000428983 TMOD1P28289 359 aa18.49■□□□□ 0.55
PCDH8P1-201ENST00000428983 TNFRSF8P28908 595 aa18.49■□□□□ 0.55
PCDH8P1-201ENST00000428983 SETQ01105 290 aaPredicted RBP18.49■□□□□ 0.55
PCDH8P1-201ENST00000428983 ARID5AQ03989 594 aa18.49■□□□□ 0.55
PCDH8P1-201ENST00000428983 EHHADHQ08426 723 aa18.49■□□□□ 0.55
PCDH8P1-201ENST00000428983 PAK2Q13177 524 aa18.49■□□□□ 0.55
PCDH8P1-201ENST00000428983 ITGB3BPQ13352 177 aaPredicted RBP18.49■□□□□ 0.55
PCDH8P1-201ENST00000428983 CCDC40Q4G0X9 1142 aa18.49■□□□□ 0.55
PCDH8P1-201ENST00000428983 POTEGQ6S5H5 508 aa18.49■□□□□ 0.55
PCDH8P1-201ENST00000428983 POTEEQ6S8J3 1075 aa18.49■□□□□ 0.55
PCDH8P1-201ENST00000428983 UNC13DQ70J99 1090 aa18.49■□□□□ 0.55
PCDH8P1-201ENST00000428983 DDX42Q86XP3 938 aaKnown RBP eCLIP18.49■□□□□ 0.55
PCDH8P1-201ENST00000428983 IKZF4Q9H2S9 585 aa18.49■□□□□ 0.55
PCDH8P1-201ENST00000428983 GOLPH3Q9H4A6 298 aa18.49■□□□□ 0.55
PCDH8P1-201ENST00000428983 RAD51CO43502 376 aa18.48■□□□□ 0.55
PCDH8P1-201ENST00000428983 HLA-DOAP06340 250 aa18.48■□□□□ 0.55
PCDH8P1-201ENST00000428983 FXR2P51116 673 aaKnown RBP eCLIP18.48■□□□□ 0.55
PCDH8P1-201ENST00000428983 RRP1BQ14684 758 aaKnown RBP18.48■□□□□ 0.55
PCDH8P1-201ENST00000428983 ASTE1Q2TB18 679 aaPredicted RBP18.48■□□□□ 0.55
PCDH8P1-201ENST00000428983 RUBCNQ92622 972 aa18.48■□□□□ 0.55
PCDH8P1-201ENST00000428983 ESYT2A0FGR8 921 aa18.48■□□□□ 0.55
PCDH8P1-201ENST00000428983 KLRG2A4D1S0 409 aaPredicted RBP18.48■□□□□ 0.55
PCDH8P1-201ENST00000428983 ATP2C2O75185 946 aa18.48■□□□□ 0.55
PCDH8P1-201ENST00000428983 PSEN1P49768 467 aa18.48■□□□□ 0.55
PCDH8P1-201ENST00000428983 CYP4A11Q02928 519 aa18.48■□□□□ 0.55
PCDH8P1-201ENST00000428983 QPCTQ16769 361 aa18.48■□□□□ 0.55
PCDH8P1-201ENST00000428983 CERKLQ49MI3 558 aaPredicted RBP18.48■□□□□ 0.55
PCDH8P1-201ENST00000428983 PRR16Q569H4 304 aa18.48■□□□□ 0.55
PCDH8P1-201ENST00000428983 HGSNATQ68CP4 663 aa18.48■□□□□ 0.55
PCDH8P1-201ENST00000428983 SLFN13Q68D06 897 aa18.48■□□□□ 0.55
PCDH8P1-201ENST00000428983 CACNA2D4Q7Z3S7 1137 aa18.48■□□□□ 0.55
PCDH8P1-201ENST00000428983 CUEDC2Q9H467 287 aa18.48■□□□□ 0.55
PCDH8P1-201ENST00000428983 VCPKMTQ9H867 229 aa18.48■□□□□ 0.55
PCDH8P1-201ENST00000428983 TRAF5O00463 557 aa18.47■□□□□ 0.55
PCDH8P1-201ENST00000428983 MYL1P05976 194 aa18.47■□□□□ 0.55
PCDH8P1-201ENST00000428983 KLRC1P26715 233 aa18.47■□□□□ 0.55
PCDH8P1-201ENST00000428983 CLK2P49760 499 aaKnown RBP18.47■□□□□ 0.55
PCDH8P1-201ENST00000428983 UBXN2AP68543 259 aa18.47■□□□□ 0.55
PCDH8P1-201ENST00000428983 COASYQ13057 564 aa18.47■□□□□ 0.55
PCDH8P1-201ENST00000428983 CDC37Q16543 378 aaPredicted RBP18.47■□□□□ 0.55
PCDH8P1-201ENST00000428983 DNAJC19Q96DA6 116 aa18.47■□□□□ 0.55
PCDH8P1-201ENST00000428983 PACSIN1Q9BY11 444 aa18.47■□□□□ 0.55
PCDH8P1-201ENST00000428983 SLC40A1Q9NP59 571 aa18.47■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms