RNA–Protein interactions for RNA: ENST00000428828.1

CECR3-201, Transcript of cat eye syndrome chromosome region, candidate 3, humanhuman

TSL 1 (best) BASIC

Gene CECR3, Length 1,915 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CECR3-201ENST00000428828 MAPK4P31152 587 aa12.64□□□□□ -0.39
CECR3-201ENST00000428828 SSR1P43307 286 aaKnown RBP12.64□□□□□ -0.39
CECR3-201ENST00000428828 CNTN2Q02246 1040 aa12.64□□□□□ -0.39
CECR3-201ENST00000428828 CEBPZQ03701 1054 aaKnown RBP12.64□□□□□ -0.39
CECR3-201ENST00000428828 AP3B2Q13367 1082 aa12.64□□□□□ -0.39
CECR3-201ENST00000428828 MCM6Q14566 821 aa12.64□□□□□ -0.39
CECR3-201ENST00000428828 CASP8Q14790 479 aa12.64□□□□□ -0.39
CECR3-201ENST00000428828 BRAPQ7Z569 592 aa12.64□□□□□ -0.39
CECR3-201ENST00000428828 TBCKQ8TEA7 893 aa12.64□□□□□ -0.39
CECR3-201ENST00000428828 TAAR1Q96RJ0 339 aa12.64□□□□□ -0.39
CECR3-201ENST00000428828 BEGAINQ9BUH8 593 aa12.64□□□□□ -0.39
CECR3-201ENST00000428828 ARHGAP39Q9C0H5 1083 aa12.64□□□□□ -0.39
CECR3-201ENST00000428828 FAM204AQ9H8W3 233 aa12.64□□□□□ -0.39
CECR3-201ENST00000428828 TFIP11Q9UBB9 837 aaKnown RBP12.64□□□□□ -0.39
CECR3-201ENST00000428828 STX10O60499 249 aa12.64□□□□□ -0.39
CECR3-201ENST00000428828 GNG11P61952 73 aa12.64□□□□□ -0.39
CECR3-201ENST00000428828 WLSQ5T9L3 541 aa12.64□□□□□ -0.39
CECR3-201ENST00000428828 MYSM1Q5VVJ2 828 aa12.64□□□□□ -0.39
CECR3-201ENST00000428828 WDR93Q6P2C0 686 aa12.64□□□□□ -0.39
CECR3-201ENST00000428828 PLEKHH3Q7Z736 793 aa12.64□□□□□ -0.39
CECR3-201ENST00000428828 FTOQ9C0B1 505 aaKnown RBP eCLIP12.64□□□□□ -0.39
CECR3-201ENST00000428828 EPC1Q9H2F5 836 aa12.64□□□□□ -0.39
CECR3-201ENST00000428828 FAM169AQ9Y6X4 670 aa12.64□□□□□ -0.39
CECR3-201ENST00000428828 CASP8AP2Q9UKL3 1982 aa12.63□□□□□ -0.39
CECR3-201ENST00000428828 WNT7AO00755 349 aa12.63□□□□□ -0.39
CECR3-201ENST00000428828 TNPO2O14787 897 aaKnown RBP12.63□□□□□ -0.39
CECR3-201ENST00000428828 PRPF6O94906 941 aaKnown RBP12.63□□□□□ -0.39
CECR3-201ENST00000428828 FSBPO95073 299 aa12.63□□□□□ -0.39
CECR3-201ENST00000428828 ADORA2AP29274 412 aa12.63□□□□□ -0.39
CECR3-201ENST00000428828 CTGFP29279 349 aa12.63□□□□□ -0.39
CECR3-201ENST00000428828 LETM2Q2VYF4 491 aa12.63□□□□□ -0.39
CECR3-201ENST00000428828 ARHGEF16Q5VV41 709 aa12.63□□□□□ -0.39
CECR3-201ENST00000428828 RMDN3Q96TC7 470 aa12.63□□□□□ -0.39
CECR3-201ENST00000428828 A0A1W2PQ27 194 aa12.62□□□□□ -0.39
CECR3-201ENST00000428828 A0A1W2PQ64 194 aa12.62□□□□□ -0.39
CECR3-201ENST00000428828 A0A1W2PQD8 194 aa12.62□□□□□ -0.39
CECR3-201ENST00000428828 FOSP01100 380 aaPredicted RBP12.62□□□□□ -0.39
CECR3-201ENST00000428828 MCM3P25205 808 aa12.62□□□□□ -0.39
CECR3-201ENST00000428828 LACTBP83111 547 aaPredicted RBP12.62□□□□□ -0.39
CECR3-201ENST00000428828 SP3Q02447 781 aa12.62□□□□□ -0.39
CECR3-201ENST00000428828 GHRHRQ02643 423 aa12.62□□□□□ -0.39
CECR3-201ENST00000428828 PPP2R5AQ15172 486 aa12.62□□□□□ -0.39
CECR3-201ENST00000428828 TMEM139Q8IV31 216 aa12.62□□□□□ -0.39
CECR3-201ENST00000428828 IL31RAQ8NI17 732 aa12.62□□□□□ -0.39
CECR3-201ENST00000428828 EHMT1Q9H9B1 1298 aa12.62□□□□□ -0.39
CECR3-201ENST00000428828 MAP3K20Q9NYL2 800 aaKnown RBP12.62□□□□□ -0.39
CECR3-201ENST00000428828 CDC23Q9UJX2 597 aa12.62□□□□□ -0.39
CECR3-201ENST00000428828 CCNT1O60563 726 aaKnown RBP12.62□□□□□ -0.39
CECR3-201ENST00000428828 MYCLP12524 364 aaPredicted RBP12.62□□□□□ -0.39
CECR3-201ENST00000428828 PTPREP23469 700 aa12.62□□□□□ -0.39
CECR3-201ENST00000428828 PSMC4P43686 418 aa12.62□□□□□ -0.39
CECR3-201ENST00000428828 ARHGAP4P98171 946 aa12.62□□□□□ -0.39
CECR3-201ENST00000428828 NCAPHQ15003 741 aa12.62□□□□□ -0.39
CECR3-201ENST00000428828 NEK8Q86SG6 692 aa12.62□□□□□ -0.39
CECR3-201ENST00000428828 HOMEZQ8IX15 550 aa12.62□□□□□ -0.39
CECR3-201ENST00000428828 DNAJC5GQ8N7S2 189 aa12.62□□□□□ -0.39
CECR3-201ENST00000428828 MAGEC3Q8TD91 643 aa12.62□□□□□ -0.39
CECR3-201ENST00000428828 WDR24Q96S15 920 aa12.62□□□□□ -0.39
CECR3-201ENST00000428828 ABCB6Q9NP58 842 aa12.62□□□□□ -0.39
CECR3-201ENST00000428828 PXMP2Q9NR77 195 aa12.62□□□□□ -0.39
CECR3-201ENST00000428828 ASTN1O14525 1302 aa12.61□□□□□ -0.39
CECR3-201ENST00000428828 N4BP1O75113 896 aaKnown RBP12.61□□□□□ -0.39
CECR3-201ENST00000428828 MCM7P33993 719 aa12.61□□□□□ -0.39
CECR3-201ENST00000428828 SREBF1P36956 1147 aa12.61□□□□□ -0.39
CECR3-201ENST00000428828 TOB1P50616 345 aaPredicted RBP12.61□□□□□ -0.39
CECR3-201ENST00000428828 FCGRTP55899 365 aa12.61□□□□□ -0.39
CECR3-201ENST00000428828 FANCCQ00597 558 aa12.61□□□□□ -0.39
CECR3-201ENST00000428828 GRB14Q14449 540 aa12.61□□□□□ -0.39
CECR3-201ENST00000428828 KIF22Q14807 665 aa12.61□□□□□ -0.39
CECR3-201ENST00000428828 PGM5Q15124 567 aa12.61□□□□□ -0.39
CECR3-201ENST00000428828 PLCB4Q15147 1175 aa12.61□□□□□ -0.39
CECR3-201ENST00000428828 ZNF174Q15697 407 aa12.61□□□□□ -0.39
CECR3-201ENST00000428828 RILPL1Q5EBL4 403 aa12.61□□□□□ -0.39
CECR3-201ENST00000428828 TTC38Q5R3I4 469 aa12.61□□□□□ -0.39
CECR3-201ENST00000428828 YTHDF3Q7Z739 585 aaKnown RBP12.61□□□□□ -0.39
CECR3-201ENST00000428828 DPP9Q86TI2 863 aa12.61□□□□□ -0.39
CECR3-201ENST00000428828 VSTM4Q8IW00 320 aa12.61□□□□□ -0.39
CECR3-201ENST00000428828 SAMD3Q8N6K7 520 aa12.61□□□□□ -0.39
CECR3-201ENST00000428828 CD99L2Q8TCZ2 262 aa12.61□□□□□ -0.39
CECR3-201ENST00000428828 DHX58Q96C10 678 aa12.61□□□□□ -0.39
CECR3-201ENST00000428828 CFHR5Q9BXR6 569 aa12.61□□□□□ -0.39
CECR3-201ENST00000428828 SAGE1Q9NXZ1 904 aa12.61□□□□□ -0.39
CECR3-201ENST00000428828 KIAA1468Q9P260 1216 aa12.61□□□□□ -0.39
CECR3-201ENST00000428828 PCDHB6Q9Y5E3 794 aa12.61□□□□□ -0.39
CECR3-201ENST00000428828 SOWAHBA6NEL2 793 aa12.6□□□□□ -0.39
CECR3-201ENST00000428828 GPR25O00155 361 aa12.6□□□□□ -0.39
CECR3-201ENST00000428828 STRNO43815 780 aa12.6□□□□□ -0.39
CECR3-201ENST00000428828 COBLO75128 1261 aa12.6□□□□□ -0.39
CECR3-201ENST00000428828 RNF40O75150 1001 aa12.6□□□□□ -0.39
CECR3-201ENST00000428828 TDP2O95551 362 aa12.6□□□□□ -0.39
CECR3-201ENST00000428828 RDXP35241 583 aaKnown RBP12.6□□□□□ -0.39
CECR3-201ENST00000428828 ZNF76P36508 570 aa12.6□□□□□ -0.39
CECR3-201ENST00000428828 FNTAP49354 379 aa12.6□□□□□ -0.39
CECR3-201ENST00000428828 ALDH5A1P51649 535 aaPredicted RBP12.6□□□□□ -0.39
CECR3-201ENST00000428828 NLRP12P59046 1061 aa12.6□□□□□ -0.39
CECR3-201ENST00000428828 B4GALNT4Q76KP1 1039 aa12.6□□□□□ -0.39
CECR3-201ENST00000428828 FMR1NBQ8N0W7 255 aaPredicted RBP12.6□□□□□ -0.39
CECR3-201ENST00000428828 FAM133AQ8N9E0 248 aa12.6□□□□□ -0.39
CECR3-201ENST00000428828 NSUN6Q8TEA1 469 aaKnown RBP12.6□□□□□ -0.39
CECR3-201ENST00000428828 TRIM47Q96LD4 638 aa12.6□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms