RNA–Protein interactions for RNA: ENST00000428626.5

SEC13-210, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 3

Gene SEC13, Length 567 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-210ENST00000428626 COL4A6Q14031 1691 aa17.75■□□□□ 0.43
SEC13-210ENST00000428626 SMCO2A6NFE2 343 aa17.75■□□□□ 0.43
SEC13-210ENST00000428626 MAFGO15525 162 aa17.75■□□□□ 0.43
SEC13-210ENST00000428626 INSRRP14616 1297 aa17.75■□□□□ 0.43
SEC13-210ENST00000428626 IGBP1P78318 339 aa17.75■□□□□ 0.43
SEC13-210ENST00000428626 PPP1R18Q6NYC8 613 aa17.75■□□□□ 0.43
SEC13-210ENST00000428626 TAF2Q6P1X5 1199 aa17.75■□□□□ 0.43
SEC13-210ENST00000428626 FBXO22Q8NEZ5 403 aa17.75■□□□□ 0.43
SEC13-210ENST00000428626 TRAPPC12Q8WVT3 735 aa17.75■□□□□ 0.43
SEC13-210ENST00000428626 HLA-CQ95604 372 aa17.75■□□□□ 0.43
SEC13-210ENST00000428626 SMARCAD1Q9H4L7 1026 aa17.75■□□□□ 0.43
SEC13-210ENST00000428626 AGO4Q9HCK5 861 aaKnown RBP17.75■□□□□ 0.43
SEC13-210ENST00000428626 BARHL2Q9NY43 387 aa17.75■□□□□ 0.43
SEC13-210ENST00000428626 COG5Q9UP83 839 aa17.75■□□□□ 0.43
SEC13-210ENST00000428626 NLRC5Q86WI3 1866 aa17.75■□□□□ 0.43
SEC13-210ENST00000428626 MEIS1O00470 390 aa17.74■□□□□ 0.43
SEC13-210ENST00000428626 LINC00271P0C7V0 271 aa17.74■□□□□ 0.43
SEC13-210ENST00000428626 ADCY7P51828 1080 aa17.74■□□□□ 0.43
SEC13-210ENST00000428626 ACTR2P61160 394 aa17.74■□□□□ 0.43
SEC13-210ENST00000428626 APOBRQ0VD83 1088 aa17.74■□□□□ 0.43
SEC13-210ENST00000428626 EPC2Q52LR7 807 aa17.74■□□□□ 0.43
SEC13-210ENST00000428626 CEP55Q53EZ4 464 aa17.74■□□□□ 0.43
SEC13-210ENST00000428626 FBXO47Q5MNV8 452 aa17.74■□□□□ 0.43
SEC13-210ENST00000428626 IL27Q8NEV9 243 aa17.74■□□□□ 0.43
SEC13-210ENST00000428626 APBB2Q92870 758 aa17.74■□□□□ 0.43
SEC13-210ENST00000428626 YME1L1Q96TA2 773 aa17.74■□□□□ 0.43
SEC13-210ENST00000428626 AGO3Q9H9G7 860 aaKnown RBP17.74■□□□□ 0.43
SEC13-210ENST00000428626 CDY2AQ9Y6F7 541 aa17.74■□□□□ 0.43
SEC13-210ENST00000428626 LOXHD1Q8IVV2 1947 aa17.74■□□□□ 0.43
SEC13-210ENST00000428626 TTC3P53804 2025 aa17.74■□□□□ 0.43
SEC13-210ENST00000428626 NFASCO94856 1347 aa17.73■□□□□ 0.43
SEC13-210ENST00000428626 ATG2AQ2TAZ0 1938 aa17.73■□□□□ 0.43
SEC13-210ENST00000428626 CCNE2O96020 404 aa17.73■□□□□ 0.43
SEC13-210ENST00000428626 SREBF1P36956 1147 aa17.73■□□□□ 0.43
SEC13-210ENST00000428626 PLCB4Q15147 1175 aa17.73■□□□□ 0.43
SEC13-210ENST00000428626 PKN1Q16512 942 aa17.73■□□□□ 0.43
SEC13-210ENST00000428626 AAK1Q2M2I8 961 aa17.73■□□□□ 0.43
SEC13-210ENST00000428626 CRYGNQ8WXF5 182 aa17.73■□□□□ 0.43
SEC13-210ENST00000428626 LINC01599Q8WXQ3 324 aa17.73■□□□□ 0.43
SEC13-210ENST00000428626 UIMC1Q96RL1 719 aa17.73■□□□□ 0.43
SEC13-210ENST00000428626 FAM49AQ9H0Q0 323 aaPredicted RBP17.73■□□□□ 0.43
SEC13-210ENST00000428626 RC3H2Q9HBD1 1191 aaKnown RBP17.73■□□□□ 0.43
SEC13-210ENST00000428626 SNX14Q9Y5W7 946 aa17.73■□□□□ 0.43
SEC13-210ENST00000428626 FAM86B1E9PN63 330 aa17.72■□□□□ 0.43
SEC13-210ENST00000428626 ENPP3O14638 875 aa17.72■□□□□ 0.43
SEC13-210ENST00000428626 ATG7O95352 703 aa17.72■□□□□ 0.43
SEC13-210ENST00000428626 FOSP01100 380 aaPredicted RBP17.72■□□□□ 0.43
SEC13-210ENST00000428626 FAM86B2P0C5J1 330 aa17.72■□□□□ 0.43
SEC13-210ENST00000428626 HSPA4P34932 840 aa17.72■□□□□ 0.43
SEC13-210ENST00000428626 KRT32Q14532 448 aa17.72■□□□□ 0.43
SEC13-210ENST00000428626 PFKFB3Q16875 520 aaPredicted RBP17.72■□□□□ 0.43
SEC13-210ENST00000428626 JAKMIP3Q5VZ66 844 aa17.72■□□□□ 0.43
SEC13-210ENST00000428626 Q6ZUG5 572 aa17.72■□□□□ 0.43
SEC13-210ENST00000428626 RTN4RL1Q86UN2 441 aaPredicted RBP17.72■□□□□ 0.43
SEC13-210ENST00000428626 RAPGEFL1Q9UHV5 662 aa17.72■□□□□ 0.43
SEC13-210ENST00000428626 IGLV3-22A0A075B6J6 115 aa17.71■□□□□ 0.43
SEC13-210ENST00000428626 IGKV6D-21A0A0A0MT36 114 aa17.71■□□□□ 0.43
SEC13-210ENST00000428626 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP17.71■□□□□ 0.43
SEC13-210ENST00000428626 hCG_1984214I3L0E3 225 aa17.71■□□□□ 0.43
SEC13-210ENST00000428626 DHX15O43143 795 aaKnown RBP17.71■□□□□ 0.43
SEC13-210ENST00000428626 PPFIA3O75145 1194 aa17.71■□□□□ 0.43
SEC13-210ENST00000428626 CD52P31358 61 aa17.71■□□□□ 0.43
SEC13-210ENST00000428626 METAP2P50579 478 aaKnown RBP eCLIP17.71■□□□□ 0.43
SEC13-210ENST00000428626 RCAN1P53805 252 aa17.71■□□□□ 0.43
SEC13-210ENST00000428626 MRPS6P82932 125 aaKnown RBP17.71■□□□□ 0.43
SEC13-210ENST00000428626 TMEM62Q0P6H9 643 aa17.71■□□□□ 0.43
SEC13-210ENST00000428626 AP3B2Q13367 1082 aa17.71■□□□□ 0.43
SEC13-210ENST00000428626 TMEM192Q8IY95 271 aa17.71■□□□□ 0.43
SEC13-210ENST00000428626 ZNF713Q8N859 430 aaPredicted RBP17.71■□□□□ 0.43
SEC13-210ENST00000428626 BRF1Q92994 677 aa17.71■□□□□ 0.43
SEC13-210ENST00000428626 JAKMIP1Q96N16 626 aaKnown RBP17.71■□□□□ 0.43
SEC13-210ENST00000428626 SDF4Q9BRK5 362 aa17.71■□□□□ 0.43
SEC13-210ENST00000428626 UBE2ZQ9H832 354 aaPredicted RBP17.71■□□□□ 0.43
SEC13-210ENST00000428626 NAP1L2Q9ULW6 460 aaPredicted RBP17.71■□□□□ 0.43
SEC13-210ENST00000428626 TRPC6Q9Y210 931 aa17.71■□□□□ 0.43
SEC13-210ENST00000428626 NID2Q14112 1375 aa17.7■□□□□ 0.42
SEC13-210ENST00000428626 RALGAPA2Q2PPJ7 1873 aa17.7■□□□□ 0.42
SEC13-210ENST00000428626 RRN3P2A6NIE6 340 aa17.7■□□□□ 0.42
SEC13-210ENST00000428626 H3BNC9 293 aa17.7■□□□□ 0.42
SEC13-210ENST00000428626 DDX39AO00148 427 aaKnown RBP17.7■□□□□ 0.42
SEC13-210ENST00000428626 SCG2P13521 617 aa17.7■□□□□ 0.42
SEC13-210ENST00000428626 STAT5BP51692 787 aa17.7■□□□□ 0.42
SEC13-210ENST00000428626 ABHD15Q6UXT9 468 aa17.7■□□□□ 0.42
SEC13-210ENST00000428626 TSHZ1Q6ZSZ6 1077 aa17.7■□□□□ 0.42
SEC13-210ENST00000428626 PLPPR4Q7Z2D5 763 aa17.7■□□□□ 0.42
SEC13-210ENST00000428626 CCDC60Q8IWA6 550 aaPredicted RBP17.7■□□□□ 0.42
SEC13-210ENST00000428626 TEX2Q8IWB9 1127 aa17.7■□□□□ 0.42
SEC13-210ENST00000428626 CRIPAKQ8N1N5 446 aa17.7■□□□□ 0.42
SEC13-210ENST00000428626 KHSRPQ92945 711 aaKnown RBP eCLIP17.7■□□□□ 0.42
SEC13-210ENST00000428626 MRPL38Q96DV4 380 aaKnown RBP17.7■□□□□ 0.42
SEC13-210ENST00000428626 AZI2Q9H6S1 392 aa17.7■□□□□ 0.42
SEC13-210ENST00000428626 CD320Q9NPF0 282 aa17.7■□□□□ 0.42
SEC13-210ENST00000428626 EDIL3O43854 480 aa17.69■□□□□ 0.42
SEC13-210ENST00000428626 HMGB1P09429 215 aaKnown RBP17.69■□□□□ 0.42
SEC13-210ENST00000428626 ATP4AP20648 1035 aa17.69■□□□□ 0.42
SEC13-210ENST00000428626 GPM6BQ13491 265 aa17.69■□□□□ 0.42
SEC13-210ENST00000428626 NTRK3Q16288 839 aa17.69■□□□□ 0.42
SEC13-210ENST00000428626 NIPA1Q7RTP0 329 aa17.69■□□□□ 0.42
SEC13-210ENST00000428626 RSPH3Q86UC2 560 aa17.69■□□□□ 0.42
SEC13-210ENST00000428626 PLA2G4DQ86XP0 818 aa17.69■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms