RNA–Protein interactions for RNA: ENST00000428313.5

C9orf3-206, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 1 (best)

Gene C9orf3, Length 2,288 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-206ENST00000428313 ASAP3Q8TDY4 903 aa17.52■□□□□ 0.4
C9orf3-206ENST00000428313 SYN2Q92777 582 aaPredicted RBP17.52■□□□□ 0.4
C9orf3-206ENST00000428313 STMN4Q9H169 189 aaPredicted RBP17.52■□□□□ 0.4
C9orf3-206ENST00000428313 DISC1Q9NRI5 854 aa17.52■□□□□ 0.4
C9orf3-206ENST00000428313 CTTNBP2NLQ9P2B4 639 aa17.52■□□□□ 0.4
C9orf3-206ENST00000428313 CEP126Q9P2H0 1117 aa17.52■□□□□ 0.4
C9orf3-206ENST00000428313 ANAPC4Q9UJX5 808 aa17.52■□□□□ 0.4
C9orf3-206ENST00000428313 G3BP2Q9UN86 482 aaKnown RBP17.52■□□□□ 0.4
C9orf3-206ENST00000428313 COL22A1Q8NFW1 1626 aaPredicted RBP17.51■□□□□ 0.39
C9orf3-206ENST00000428313 SHBGP04278 402 aa17.51■□□□□ 0.39
C9orf3-206ENST00000428313 RXRBP28702 533 aa17.51■□□□□ 0.39
C9orf3-206ENST00000428313 MAEAQ7L5Y9 396 aa17.51■□□□□ 0.39
C9orf3-206ENST00000428313 DNAJC9Q8WXX5 260 aa17.51■□□□□ 0.39
C9orf3-206ENST00000428313 FAM136AQ96C01 138 aa17.51■□□□□ 0.39
C9orf3-206ENST00000428313 FAM207AQ9NSI2 230 aaPredicted RBP17.51■□□□□ 0.39
C9orf3-206ENST00000428313 DLGAP2Q9P1A6 1054 aa17.51■□□□□ 0.39
C9orf3-206ENST00000428313 SCOCQ9UIL1 159 aa17.51■□□□□ 0.39
C9orf3-206ENST00000428313 KCNK3O14649 394 aa17.51■□□□□ 0.39
C9orf3-206ENST00000428313 MYBL1P10243 752 aa17.51■□□□□ 0.39
C9orf3-206ENST00000428313 ITGA6P23229 1130 aa17.51■□□□□ 0.39
C9orf3-206ENST00000428313 KLRC1P26715 233 aa17.51■□□□□ 0.39
C9orf3-206ENST00000428313 RFC5P40937 340 aa17.51■□□□□ 0.39
C9orf3-206ENST00000428313 USP11P51784 963 aa17.51■□□□□ 0.39
C9orf3-206ENST00000428313 UBE3CQ15386 1083 aa17.51■□□□□ 0.39
C9orf3-206ENST00000428313 IL17AQ16552 155 aa17.51■□□□□ 0.39
C9orf3-206ENST00000428313 SLC9C1Q4G0N8 1177 aa17.51■□□□□ 0.39
C9orf3-206ENST00000428313 CCDC178Q5BJE1 867 aa17.51■□□□□ 0.39
C9orf3-206ENST00000428313 RNF220Q5VTB9 566 aa17.51■□□□□ 0.39
C9orf3-206ENST00000428313 ANKRD40Q6AI12 368 aa17.51■□□□□ 0.39
C9orf3-206ENST00000428313 CHADLQ6NUI6 762 aa17.51■□□□□ 0.39
C9orf3-206ENST00000428313 CCDC82Q8N4S0 544 aa17.51■□□□□ 0.39
C9orf3-206ENST00000428313 PIGOQ8TEQ8 1089 aa17.51■□□□□ 0.39
C9orf3-206ENST00000428313 BUD13Q9BRD0 619 aaKnown RBP eCLIP17.51■□□□□ 0.397e-7■■■□□ 15.2
C9orf3-206ENST00000428313 UBE2OQ9C0C9 1292 aaKnown RBP17.51■□□□□ 0.39
C9orf3-206ENST00000428313 MTFR1LQ9H019 292 aa17.51■□□□□ 0.39
C9orf3-206ENST00000428313 ZCWPW1Q9H0M4 648 aa17.51■□□□□ 0.39
C9orf3-206ENST00000428313 ATXN10Q9UBB4 475 aa17.51■□□□□ 0.39
C9orf3-206ENST00000428313 RGS16O15492 202 aaPredicted RBP17.5■□□□□ 0.39
C9orf3-206ENST00000428313 SFSWAPQ12872 951 aaKnown RBP17.5■□□□□ 0.39
C9orf3-206ENST00000428313 SCARF1Q14162 830 aa17.5■□□□□ 0.39
C9orf3-206ENST00000428313 MYBPC3Q14896 1274 aa17.5■□□□□ 0.39
C9orf3-206ENST00000428313 C6orf118Q5T5N4 469 aa17.5■□□□□ 0.39
C9orf3-206ENST00000428313 TMC4Q7Z404 712 aa17.5■□□□□ 0.39
C9orf3-206ENST00000428313 OPTNQ96CV9 577 aa17.5■□□□□ 0.39
C9orf3-206ENST00000428313 FMO2Q99518 471 aa17.5■□□□□ 0.39
C9orf3-206ENST00000428313 TMEM109Q9BVC6 243 aa17.5■□□□□ 0.39
C9orf3-206ENST00000428313 ATP8A2Q9NTI2 1148 aa17.5■□□□□ 0.39
C9orf3-206ENST00000428313 TXLNGQ9NUQ3 528 aa17.5■□□□□ 0.39
C9orf3-206ENST00000428313 DNAAF2Q9NVR5 837 aaKnown RBP17.5■□□□□ 0.39
C9orf3-206ENST00000428313 PACSIN2Q9UNF0 486 aaPredicted RBP17.5■□□□□ 0.39
C9orf3-206ENST00000428313 THRAP3Q9Y2W1 955 aaKnown RBP17.5■□□□□ 0.39
C9orf3-206ENST00000428313 UTP11Q9Y3A2 253 aaKnown RBP17.5■□□□□ 0.39
C9orf3-206ENST00000428313 CD2APQ9Y5K6 639 aa17.5■□□□□ 0.39
C9orf3-206ENST00000428313 ATP5HO75947 161 aa17.5■□□□□ 0.39
C9orf3-206ENST00000428313 UNC5CO95185 931 aa17.5■□□□□ 0.39
C9orf3-206ENST00000428313 SERPING1P05155 500 aa17.5■□□□□ 0.39
C9orf3-206ENST00000428313 TPP2P29144 1249 aaPredicted RBP17.5■□□□□ 0.39
C9orf3-206ENST00000428313 CNGA2Q16280 664 aa17.5■□□□□ 0.39
C9orf3-206ENST00000428313 PKN1Q16512 942 aa17.5■□□□□ 0.39
C9orf3-206ENST00000428313 COBLL1Q53SF7 1204 aa17.5■□□□□ 0.39
C9orf3-206ENST00000428313 LCA5Q86VQ0 697 aa17.5■□□□□ 0.39
C9orf3-206ENST00000428313 PABPC3Q9H361 631 aaKnown RBP17.5■□□□□ 0.39
C9orf3-206ENST00000428313 ZMYND8Q9ULU4 1186 aaPredicted RBP17.5■□□□□ 0.39
C9orf3-206ENST00000428313 TMCO1Q9UM00 188 aa17.5■□□□□ 0.39
C9orf3-206ENST00000428313 RPL26L1Q9UNX3 145 aaKnown RBP17.5■□□□□ 0.39
C9orf3-206ENST00000428313 MROH7Q68CQ1 1323 aa17.49■□□□□ 0.39
C9orf3-206ENST00000428313 ADORA1P30542 326 aa17.49■□□□□ 0.39
C9orf3-206ENST00000428313 MAN2A1Q16706 1144 aa17.49■□□□□ 0.39
C9orf3-206ENST00000428313 NAALADL2Q58DX5 795 aa17.49■□□□□ 0.39
C9orf3-206ENST00000428313 ACBD5Q5T8D3 534 aaPredicted RBP17.49■□□□□ 0.39
C9orf3-206ENST00000428313 BTNL9Q6UXG8 535 aa17.49■□□□□ 0.39
C9orf3-206ENST00000428313 ZNF654Q8IZM8 581 aa17.49■□□□□ 0.39
C9orf3-206ENST00000428313 CMTR1Q8N1G2 835 aaKnown RBP17.49■□□□□ 0.39
C9orf3-206ENST00000428313 AGGF1Q8N302 714 aaeCLIP17.49■□□□□ 0.395e-11■■■■■ 61.5
C9orf3-206ENST00000428313 RBBP8NLQ8NC74 664 aaPredicted RBP17.49■□□□□ 0.39
C9orf3-206ENST00000428313 NEK9Q8TD19 979 aa17.49■□□□□ 0.39
C9orf3-206ENST00000428313 ANKS1AQ92625 1134 aa17.49■□□□□ 0.39
C9orf3-206ENST00000428313 TIPINQ9BVW5 301 aa17.49■□□□□ 0.39
C9orf3-206ENST00000428313 EPB41L4BQ9H329 900 aa17.49■□□□□ 0.39
C9orf3-206ENST00000428313 MMRN2Q9H8L6 949 aa17.49■□□□□ 0.39
C9orf3-206ENST00000428313 PRKAG3Q9UGI9 489 aa17.49■□□□□ 0.39
C9orf3-206ENST00000428313 FBXO3Q9UK99 471 aa17.49■□□□□ 0.39
C9orf3-206ENST00000428313 PNMA3Q9UL41 463 aa17.49■□□□□ 0.39
C9orf3-206ENST00000428313 ATP8A1Q9Y2Q0 1164 aa17.49■□□□□ 0.39
C9orf3-206ENST00000428313 SLC4A7Q9Y6M7 1214 aa17.49■□□□□ 0.39
C9orf3-206ENST00000428313 AKAP11Q9UKA4 1901 aa17.49■□□□□ 0.39
C9orf3-206ENST00000428313 MYH4Q9Y623 1939 aa17.49■□□□□ 0.39
C9orf3-206ENST00000428313 PRPF3O43395 683 aaKnown RBP17.49■□□□□ 0.39
C9orf3-206ENST00000428313 CEP104O60308 925 aa17.49■□□□□ 0.39
C9orf3-206ENST00000428313 ABCD1P33897 745 aa17.49■□□□□ 0.39
C9orf3-206ENST00000428313 TDRD12Q587J7 1177 aaKnown RBP17.49■□□□□ 0.39
C9orf3-206ENST00000428313 AKNAD1Q5T1N1 836 aa17.49■□□□□ 0.39
C9orf3-206ENST00000428313 RNF43Q68DV7 783 aa17.49■□□□□ 0.39
C9orf3-206ENST00000428313 ARHGAP18Q8N392 663 aa17.49■□□□□ 0.39
C9orf3-206ENST00000428313 FITM2Q8N6M3 262 aa17.49■□□□□ 0.39
C9orf3-206ENST00000428313 ZMYND12Q9H0C1 365 aa17.49■□□□□ 0.39
C9orf3-206ENST00000428313 DDX47Q9H0S4 455 aaKnown RBP17.49■□□□□ 0.39
C9orf3-206ENST00000428313 LRMDAQ9H2I8 198 aa17.49■□□□□ 0.39
C9orf3-206ENST00000428313 VCX3BQ9H321 246 aa17.49■□□□□ 0.39
C9orf3-206ENST00000428313 MMADHCQ9H3L0 296 aaPredicted RBP17.49■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms