RNA–Protein interactions for RNA: ENST00000425231.2

CDCP1-202, Transcript of CUB domain containing protein 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CDCP1, Length 1,416 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDCP1-202ENST00000425231 ARHGEF15O94989 841 aa24.52■■□□□ 1.52
CDCP1-202ENST00000425231 CTSHP09668 335 aa24.52■■□□□ 1.52
CDCP1-202ENST00000425231 RUFY4Q6ZNE9 571 aa24.52■■□□□ 1.52
CDCP1-202ENST00000425231 CCDC148Q8NFR7 591 aa24.52■■□□□ 1.52
CDCP1-202ENST00000425231 RASGRP4Q8TDF6 673 aa24.52■■□□□ 1.52
CDCP1-202ENST00000425231 SH3GLB2Q9NR46 395 aa24.52■■□□□ 1.52
CDCP1-202ENST00000425231 CCNE2O96020 404 aa24.51■■□□□ 1.51
CDCP1-202ENST00000425231 TAP1Q03518 808 aa24.51■■□□□ 1.51
CDCP1-202ENST00000425231 PLPPR4Q7Z2D5 763 aa24.51■■□□□ 1.51
CDCP1-202ENST00000425231 USP38Q8NB14 1042 aa24.51■■□□□ 1.51
CDCP1-202ENST00000425231 BICD2Q8TD16 824 aa24.51■■□□□ 1.51
CDCP1-202ENST00000425231 AZI2Q9H6S1 392 aa24.51■■□□□ 1.51
CDCP1-202ENST00000425231 IGKV6D-21A0A0A0MT36 114 aa24.5■■□□□ 1.51
CDCP1-202ENST00000425231 EDIL3O43854 480 aa24.5■■□□□ 1.51
CDCP1-202ENST00000425231 TLL1O43897 1013 aa24.5■■□□□ 1.51
CDCP1-202ENST00000425231 CHRNA1P02708 482 aa24.5■■□□□ 1.51
CDCP1-202ENST00000425231 INSRRP14616 1297 aa24.5■■□□□ 1.51
CDCP1-202ENST00000425231 STAT5BP51692 787 aa24.5■■□□□ 1.51
CDCP1-202ENST00000425231 SSRP1Q08945 709 aaKnown RBP24.5■■□□□ 1.51
CDCP1-202ENST00000425231 STK3Q13188 491 aa24.5■■□□□ 1.51
CDCP1-202ENST00000425231 TAF2Q6P1X5 1199 aa24.5■■□□□ 1.51
CDCP1-202ENST00000425231 LIN28BQ6ZN17 250 aaKnown RBP eCLIP24.5■■□□□ 1.51
CDCP1-202ENST00000425231 TRIM22Q8IYM9 498 aa24.5■■□□□ 1.51
CDCP1-202ENST00000425231 TUBE1Q9UJT0 475 aa24.5■■□□□ 1.51
CDCP1-202ENST00000425231 IPO5O00410 1097 aaKnown RBP24.49■■□□□ 1.51
CDCP1-202ENST00000425231 TRANK1O15050 2925 aa24.49■■□□□ 1.51
CDCP1-202ENST00000425231 GJB5O95377 273 aa24.49■■□□□ 1.51
CDCP1-202ENST00000425231 CIITAP33076 1130 aa24.49■■□□□ 1.51
CDCP1-202ENST00000425231 PLCB4Q15147 1175 aa24.49■■□□□ 1.51
CDCP1-202ENST00000425231 ABHD15Q6UXT9 468 aa24.49■■□□□ 1.51
CDCP1-202ENST00000425231 MICAL3Q7RTP6 2002 aa24.48■■□□□ 1.51
CDCP1-202ENST00000425231 LCHNA4D1U4 455 aa24.48■■□□□ 1.51
CDCP1-202ENST00000425231 RRN3P2A6NIE6 340 aa24.48■■□□□ 1.51
CDCP1-202ENST00000425231 DDX39AO00148 427 aaKnown RBP24.48■■□□□ 1.51
CDCP1-202ENST00000425231 CPLX1O14810 134 aa24.48■■□□□ 1.51
CDCP1-202ENST00000425231 CENPBP07199 599 aaPredicted RBP24.48■■□□□ 1.51
CDCP1-202ENST00000425231 UIMC1Q96RL1 719 aa24.48■■□□□ 1.51
CDCP1-202ENST00000425231 ZBED2Q9BTP6 218 aa24.48■■□□□ 1.51
CDCP1-202ENST00000425231 DLL1O00548 723 aa24.47■■□□□ 1.51
CDCP1-202ENST00000425231 DEXIO95424 95 aa24.47■■□□□ 1.51
CDCP1-202ENST00000425231 IGFBP4P22692 258 aa24.47■■□□□ 1.51
CDCP1-202ENST00000425231 NLRP5P59047 1200 aa24.47■■□□□ 1.51
CDCP1-202ENST00000425231 ANAPC15P60006 121 aa24.47■■□□□ 1.51
CDCP1-202ENST00000425231 IGBP1P78318 339 aa24.47■■□□□ 1.51
CDCP1-202ENST00000425231 MGAT3Q09327 533 aa24.47■■□□□ 1.51
CDCP1-202ENST00000425231 DNAJB3Q8WWF6 145 aa24.47■■□□□ 1.51
CDCP1-202ENST00000425231 SEPT8Q92599 483 aa24.47■■□□□ 1.51
CDCP1-202ENST00000425231 ZBTB10Q96DT7 871 aa24.47■■□□□ 1.51
CDCP1-202ENST00000425231 RAD9AQ99638 391 aa24.47■■□□□ 1.51
CDCP1-202ENST00000425231 ZNF577Q9BSK1 485 aa24.47■■□□□ 1.51
CDCP1-202ENST00000425231 CERS4Q9HA82 394 aa24.47■■□□□ 1.51
CDCP1-202ENST00000425231 SLC26A2P50443 739 aa24.46■■□□□ 1.51
CDCP1-202ENST00000425231 SETQ01105 290 aaPredicted RBP24.46■■□□□ 1.51
CDCP1-202ENST00000425231 SPRED2Q7Z698 418 aa24.46■■□□□ 1.51
CDCP1-202ENST00000425231 TNPO1Q92973 898 aaKnown RBP24.46■■□□□ 1.51
CDCP1-202ENST00000425231 LENG9Q96B70 501 aa24.46■■□□□ 1.51
CDCP1-202ENST00000425231 TBC1D22BQ9NU19 505 aa24.46■■□□□ 1.51
CDCP1-202ENST00000425231 TRPC6Q9Y210 931 aa24.46■■□□□ 1.51
CDCP1-202ENST00000425231 VCANP13611 3396 aa24.46■■□□□ 1.51
CDCP1-202ENST00000425231 REV3LO60673 3130 aa24.45■■□□□ 1.51
CDCP1-202ENST00000425231 SIP14410 1827 aa24.45■■□□□ 1.51
CDCP1-202ENST00000425231 EPOPA6NHQ4 379 aa24.45■■□□□ 1.51
CDCP1-202ENST00000425231 RFXAPO00287 272 aa24.45■■□□□ 1.51
CDCP1-202ENST00000425231 SCRN1Q12765 414 aa24.45■■□□□ 1.51
CDCP1-202ENST00000425231 PRR16Q569H4 304 aa24.45■■□□□ 1.51
CDCP1-202ENST00000425231 CPLX2Q6PUV4 134 aaKnown RBP24.45■■□□□ 1.51
CDCP1-202ENST00000425231 RSPH3Q86UC2 560 aa24.45■■□□□ 1.51
CDCP1-202ENST00000425231 CCDC60Q8IWA6 550 aaPredicted RBP24.45■■□□□ 1.51
CDCP1-202ENST00000425231 IL17RAQ96F46 866 aa24.45■■□□□ 1.51
CDCP1-202ENST00000425231 AIFM3Q96NN9 605 aa24.45■■□□□ 1.51
CDCP1-202ENST00000425231 TPCN1Q9ULQ1 816 aa24.45■■□□□ 1.51
CDCP1-202ENST00000425231 PCDHA4Q9UN74 947 aa24.45■■□□□ 1.51
CDCP1-202ENST00000425231 POTEB3A0JP26 581 aa24.44■■□□□ 1.5
CDCP1-202ENST00000425231 M0R2N6 131 aa24.44■■□□□ 1.5
CDCP1-202ENST00000425231 USP11P51784 963 aa24.44■■□□□ 1.5
CDCP1-202ENST00000425231 NPY5RQ15761 445 aa24.44■■□□□ 1.5
CDCP1-202ENST00000425231 POTEBQ6S5H4 581 aa24.44■■□□□ 1.5
CDCP1-202ENST00000425231 TRAPPC12Q8WVT3 735 aa24.44■■□□□ 1.5
CDCP1-202ENST00000425231 PPM1EQ8WY54 764 aa24.44■■□□□ 1.5
CDCP1-202ENST00000425231 IFIH1Q9BYX4 1025 aaKnown RBP24.44■■□□□ 1.5
CDCP1-202ENST00000425231 LOC101059915A0A1B0GWI6 518 aaPredicted RBP24.44■■□□□ 1.5
CDCP1-202ENST00000425231 AMHP03971 560 aa24.44■■□□□ 1.5
CDCP1-202ENST00000425231 POU3F3P20264 500 aaPredicted RBP24.44■■□□□ 1.5
CDCP1-202ENST00000425231 FAM117BQ6P1L5 589 aa24.44■■□□□ 1.5
CDCP1-202ENST00000425231 MYOCDQ8IZQ8 938 aa24.44■■□□□ 1.5
CDCP1-202ENST00000425231 ARNTL2Q8WYA1 636 aa24.44■■□□□ 1.5
CDCP1-202ENST00000425231 APBB2Q92870 758 aa24.44■■□□□ 1.5
CDCP1-202ENST00000425231 PCDHA2Q9Y5H9 948 aa24.44■■□□□ 1.5
CDCP1-202ENST00000425231 BACH1O14867 736 aa24.43■■□□□ 1.5
CDCP1-202ENST00000425231 GHRP10912 638 aa24.43■■□□□ 1.5
CDCP1-202ENST00000425231 ATP4AP20648 1035 aa24.43■■□□□ 1.5
CDCP1-202ENST00000425231 LPIN1Q14693 890 aa24.43■■□□□ 1.5
CDCP1-202ENST00000425231 FAM160B1Q5W0V3 765 aa24.43■■□□□ 1.5
CDCP1-202ENST00000425231 ZNF746Q6NUN9 644 aaPredicted RBP24.43■■□□□ 1.5
CDCP1-202ENST00000425231 SWSAP1Q6NVH7 229 aa24.43■■□□□ 1.5
CDCP1-202ENST00000425231 MIS18BP1Q6P0N0 1132 aa24.43■■□□□ 1.5
CDCP1-202ENST00000425231 FAM177A1Q8N128 213 aaPredicted RBP24.43■■□□□ 1.5
CDCP1-202ENST00000425231 SLKQ9H2G2 1235 aaPredicted RBP24.43■■□□□ 1.5
CDCP1-202ENST00000425231 ZNF302Q9NR11 478 aa24.43■■□□□ 1.5
CDCP1-202ENST00000425231 CDY2AQ9Y6F7 541 aa24.43■■□□□ 1.5
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms