RNA–Protein interactions for RNA: ENST00000425072.5

MDC1-205, Transcript of mediator of DNA damage checkpoint 1, humanhuman

TSL 3

Gene MDC1, Length 582 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDC1-205ENST00000425072 KBTBD4Q9NVX7 518 aa11.55□□□□□ -0.56
MDC1-205ENST00000425072 MGAMO43451 1857 aa11.55□□□□□ -0.56
MDC1-205ENST00000425072 LCTP09848 1927 aa11.54□□□□□ -0.56
MDC1-205ENST00000425072 A0A087X0B3 334 aa11.54□□□□□ -0.56
MDC1-205ENST00000425072 SYCE3A1L190 88 aa11.54□□□□□ -0.56
MDC1-205ENST00000425072 GTPBP6O43824 516 aaPredicted RBP11.54□□□□□ -0.56
MDC1-205ENST00000425072 MED24O75448 989 aa11.54□□□□□ -0.56
MDC1-205ENST00000425072 LYPLA2O95372 231 aa11.54□□□□□ -0.56
MDC1-205ENST00000425072 EYA4O95677 639 aa11.54□□□□□ -0.56
MDC1-205ENST00000425072 GH1P01241 217 aa11.54□□□□□ -0.56
MDC1-205ENST00000425072 AFMP43652 599 aa11.54□□□□□ -0.56
MDC1-205ENST00000425072 ACTR2P61160 394 aa11.54□□□□□ -0.56
MDC1-205ENST00000425072 LY6KQ17RY6 165 aa11.54□□□□□ -0.56
MDC1-205ENST00000425072 TMEM119Q4V9L6 283 aa11.54□□□□□ -0.56
MDC1-205ENST00000425072 FAM160B1Q5W0V3 765 aa11.54□□□□□ -0.56
MDC1-205ENST00000425072 LRSAM1Q6UWE0 723 aa11.54□□□□□ -0.56
MDC1-205ENST00000425072 ABHD15Q6UXT9 468 aa11.54□□□□□ -0.56
MDC1-205ENST00000425072 C4orf19Q8IY42 314 aa11.54□□□□□ -0.56
MDC1-205ENST00000425072 SYT2Q8N9I0 419 aaPredicted RBP11.54□□□□□ -0.56
MDC1-205ENST00000425072 LARP4BQ92615 738 aaKnown RBP11.54□□□□□ -0.56
MDC1-205ENST00000425072 RAD54LQ92698 747 aa11.54□□□□□ -0.56
MDC1-205ENST00000425072 ATP6V0A1Q93050 837 aa11.54□□□□□ -0.56
MDC1-205ENST00000425072 DYDC2Q96IM9 177 aa11.54□□□□□ -0.56
MDC1-205ENST00000425072 C7orf25Q9BPX7 421 aa11.54□□□□□ -0.56
MDC1-205ENST00000425072 NRBP2Q9NSY0 501 aa11.54□□□□□ -0.56
MDC1-205ENST00000425072 RMND1Q9NWS8 449 aa11.54□□□□□ -0.56
MDC1-205ENST00000425072 RGL1Q9NZL6 768 aa11.54□□□□□ -0.56
MDC1-205ENST00000425072 Q9Y3F1 56 aa11.54□□□□□ -0.56
MDC1-205ENST00000425072 MCM3APO60318 1980 aa11.54□□□□□ -0.56
MDC1-205ENST00000425072 PVALEFA0A1B0GWK0 134 aa11.53□□□□□ -0.56
MDC1-205ENST00000425072 NOP56O00567 594 aaKnown RBP11.53□□□□□ -0.56
MDC1-205ENST00000425072 PPFIA4O75335 1185 aa11.53□□□□□ -0.56
MDC1-205ENST00000425072 ECM2O94769 699 aaPredicted RBP11.53□□□□□ -0.56
MDC1-205ENST00000425072 GGPS1O95749 300 aa11.53□□□□□ -0.56
MDC1-205ENST00000425072 CCNE2O96020 404 aa11.53□□□□□ -0.56
MDC1-205ENST00000425072 PLA2G4BP0C869 781 aa11.53□□□□□ -0.56
MDC1-205ENST00000425072 FLT3LGP49771 235 aa11.53□□□□□ -0.56
MDC1-205ENST00000425072 CYP4A11Q02928 519 aa11.53□□□□□ -0.56
MDC1-205ENST00000425072 TNFAIP2Q03169 654 aa11.53□□□□□ -0.56
MDC1-205ENST00000425072 CTTNQ14247 550 aaKnown RBP11.53□□□□□ -0.56
MDC1-205ENST00000425072 DUSP28Q4G0W2 176 aa11.53□□□□□ -0.56
MDC1-205ENST00000425072 NAALADL2Q58DX5 795 aa11.53□□□□□ -0.56
MDC1-205ENST00000425072 SWSAP1Q6NVH7 229 aa11.53□□□□□ -0.56
MDC1-205ENST00000425072 FBXO16Q8IX29 292 aaPredicted RBP11.53□□□□□ -0.56
MDC1-205ENST00000425072 CKAP2LQ8IYA6 745 aa11.53□□□□□ -0.56
MDC1-205ENST00000425072 TRIML1Q8N9V2 468 aa11.53□□□□□ -0.56
MDC1-205ENST00000425072 NAT10Q9H0A0 1025 aaKnown RBP11.53□□□□□ -0.56
MDC1-205ENST00000425072 AZI2Q9H6S1 392 aa11.53□□□□□ -0.56
MDC1-205ENST00000425072 ANKEF1Q9NU02 776 aa11.53□□□□□ -0.56
MDC1-205ENST00000425072 ANO10Q9NW15 660 aa11.53□□□□□ -0.56
MDC1-205ENST00000425072 KCND2Q9NZV8 630 aa11.53□□□□□ -0.56
MDC1-205ENST00000425072 SRRDQ9UH36 339 aa11.53□□□□□ -0.56
MDC1-205ENST00000425072 DBR1Q9UK59 544 aaKnown RBP11.53□□□□□ -0.56
MDC1-205ENST00000425072 FAM184BQ9ULE4 1060 aa11.53□□□□□ -0.56
MDC1-205ENST00000425072 PCDHA5Q9Y5H7 936 aa11.53□□□□□ -0.56
MDC1-205ENST00000425072 MYH9P35579 1960 aaKnown RBP11.53□□□□□ -0.56
MDC1-205ENST00000425072 ZNF236Q9UL36 1845 aa11.53□□□□□ -0.56
MDC1-205ENST00000425072 POTEB3A0JP26 581 aa11.52□□□□□ -0.57
MDC1-205ENST00000425072 E9PMD0 336 aa11.52□□□□□ -0.57
MDC1-205ENST00000425072 BACH1O14867 736 aa11.52□□□□□ -0.57
MDC1-205ENST00000425072 FARP2O94887 1054 aaPredicted RBP11.52□□□□□ -0.57
MDC1-205ENST00000425072 SUPT20HL2P0C7V6 817 aa11.52□□□□□ -0.57
MDC1-205ENST00000425072 UBA1P22314 1058 aaKnown RBP11.52□□□□□ -0.57
MDC1-205ENST00000425072 SARSP49591 514 aaKnown RBP11.52□□□□□ -0.57
MDC1-205ENST00000425072 SLC26A2P50443 739 aa11.52□□□□□ -0.57
MDC1-205ENST00000425072 STAT5BP51692 787 aa11.52□□□□□ -0.57
MDC1-205ENST00000425072 PSMD2Q13200 908 aa11.52□□□□□ -0.57
MDC1-205ENST00000425072 PNOCQ13519 176 aa11.52□□□□□ -0.57
MDC1-205ENST00000425072 DHX8Q14562 1220 aaKnown RBP11.52□□□□□ -0.57
MDC1-205ENST00000425072 MCM6Q14566 821 aa11.52□□□□□ -0.57
MDC1-205ENST00000425072 ECM1Q16610 540 aa11.52□□□□□ -0.57
MDC1-205ENST00000425072 CCDC144BQ3MJ40 725 aa11.52□□□□□ -0.57
MDC1-205ENST00000425072 BRDTQ58F21 947 aaPredicted RBP11.52□□□□□ -0.57
MDC1-205ENST00000425072 CT47A1Q5JQC4 288 aaPredicted RBP11.52□□□□□ -0.57
MDC1-205ENST00000425072 NT5DC1Q5TFE4 455 aa11.52□□□□□ -0.57
MDC1-205ENST00000425072 CNNM4Q6P4Q7 775 aa11.52□□□□□ -0.57
MDC1-205ENST00000425072 POTEBQ6S5H4 581 aa11.52□□□□□ -0.57
MDC1-205ENST00000425072 PLPPR4Q7Z2D5 763 aa11.52□□□□□ -0.57
MDC1-205ENST00000425072 EXOC8Q8IYI6 725 aa11.52□□□□□ -0.57
MDC1-205ENST00000425072 EMID1Q96A84 441 aaPredicted RBP11.52□□□□□ -0.57
MDC1-205ENST00000425072 SPATA33Q96N06 139 aa11.52□□□□□ -0.57
MDC1-205ENST00000425072 KATNBL1Q9H079 304 aa11.52□□□□□ -0.57
MDC1-205ENST00000425072 TSPY26PQ9H489 355 aa11.52□□□□□ -0.57
MDC1-205ENST00000425072 SMARCAD1Q9H4L7 1026 aa11.52□□□□□ -0.57
MDC1-205ENST00000425072 ZNF302Q9NR11 478 aa11.52□□□□□ -0.57
MDC1-205ENST00000425072 PDGFCQ9NRA1 345 aa11.52□□□□□ -0.57
MDC1-205ENST00000425072 BLOC1S4Q9NUP1 217 aa11.52□□□□□ -0.57
MDC1-205ENST00000425072 GABBR1Q9UBS5 961 aa11.52□□□□□ -0.57
MDC1-205ENST00000425072 KCNG1Q9UIX4 513 aa11.52□□□□□ -0.57
MDC1-205ENST00000425072 TUBE1Q9UJT0 475 aa11.52□□□□□ -0.57
MDC1-205ENST00000425072 ZHX1Q9UKY1 873 aaPredicted RBP11.52□□□□□ -0.57
MDC1-205ENST00000425072 IGKV6D-21A0A0A0MT36 114 aa11.51□□□□□ -0.57
MDC1-205ENST00000425072 GSTTP1A0A1W2PQM5 241 aa11.51□□□□□ -0.57
MDC1-205ENST00000425072 IGHA2P01877 340 aa11.51□□□□□ -0.57
MDC1-205ENST00000425072 RPN1P04843 607 aaKnown RBP11.51□□□□□ -0.57
MDC1-205ENST00000425072 SSBP05455 408 aaKnown RBP eCLIP11.51□□□□□ -0.57
MDC1-205ENST00000425072 KRT18P05783 430 aaKnown RBP11.51□□□□□ -0.57
MDC1-205ENST00000425072 CTGFP29279 349 aa11.51□□□□□ -0.57
MDC1-205ENST00000425072 NLRP12P59046 1061 aa11.51□□□□□ -0.57
MDC1-205ENST00000425072 DPYDQ12882 1025 aa11.51□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 45.8 ms