RNA–Protein interactions for RNA: ENST00000424804.6

VRK3-203, Transcript of vaccinia related kinase 3, humanhuman

TSL 2

Gene VRK3, Length 1,061 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-203ENST00000424804 ENPP3O14638 875 aa14.85□□□□□ -0.03
VRK3-203ENST00000424804 MAFGO15525 162 aa14.85□□□□□ -0.03
VRK3-203ENST00000424804 UPP2O95045 317 aa14.85□□□□□ -0.03
VRK3-203ENST00000424804 COL19A1Q14993 1142 aa14.85□□□□□ -0.03
VRK3-203ENST00000424804 GRIK4Q16099 956 aa14.85□□□□□ -0.03
VRK3-203ENST00000424804 IL27Q8NEV9 243 aa14.85□□□□□ -0.03
VRK3-203ENST00000424804 LINC01599Q8WXQ3 324 aa14.85□□□□□ -0.03
VRK3-203ENST00000424804 MRPL38Q96DV4 380 aaKnown RBP14.85□□□□□ -0.03
VRK3-203ENST00000424804 CDHR1Q96JP9 859 aa14.85□□□□□ -0.03
VRK3-203ENST00000424804 MXRA8Q9BRK3 442 aa14.85□□□□□ -0.03
VRK3-203ENST00000424804 IFIH1Q9BYX4 1025 aaKnown RBP14.85□□□□□ -0.03
VRK3-203ENST00000424804 AGO3Q9H9G7 860 aaKnown RBP14.85□□□□□ -0.03
VRK3-203ENST00000424804 ATG7O95352 703 aa14.84□□□□□ -0.03
VRK3-203ENST00000424804 HMGB1P09429 215 aaKnown RBP14.84□□□□□ -0.03
VRK3-203ENST00000424804 ARP10275 920 aa14.84□□□□□ -0.03
VRK3-203ENST00000424804 GHRP10912 638 aa14.84□□□□□ -0.03
VRK3-203ENST00000424804 MARK3P27448 753 aa14.84□□□□□ -0.03
VRK3-203ENST00000424804 CLK2P49760 499 aaKnown RBP14.84□□□□□ -0.03
VRK3-203ENST00000424804 PPFIA1Q13136 1202 aa14.84□□□□□ -0.03
VRK3-203ENST00000424804 ITGB3BPQ13352 177 aaPredicted RBP14.84□□□□□ -0.03
VRK3-203ENST00000424804 MTMR1Q13613 665 aa14.84□□□□□ -0.03
VRK3-203ENST00000424804 LEXMQ3ZCV2 418 aa14.84□□□□□ -0.03
VRK3-203ENST00000424804 FBXO47Q5MNV8 452 aa14.84□□□□□ -0.03
VRK3-203ENST00000424804 Q6ZUG5 572 aa14.84□□□□□ -0.03
VRK3-203ENST00000424804 TMEM192Q8IY95 271 aa14.84□□□□□ -0.03
VRK3-203ENST00000424804 DNAJB3Q8WWF6 145 aa14.84□□□□□ -0.03
VRK3-203ENST00000424804 APBB2Q92870 758 aa14.84□□□□□ -0.03
VRK3-203ENST00000424804 ZNF689Q96CS4 500 aaPredicted RBP14.84□□□□□ -0.03
VRK3-203ENST00000424804 PGBD1Q96JS3 809 aa14.84□□□□□ -0.03
VRK3-203ENST00000424804 SAMD11Q96NU1 681 aa14.84□□□□□ -0.03
VRK3-203ENST00000424804 RIC8AQ9NPQ8 531 aa14.84□□□□□ -0.03
VRK3-203ENST00000424804 C11orf16Q9NQ32 467 aa14.84□□□□□ -0.03
VRK3-203ENST00000424804 KCNH7Q9NS40 1196 aa14.84□□□□□ -0.03
VRK3-203ENST00000424804 ERAP1Q9NZ08 941 aa14.84□□□□□ -0.03
VRK3-203ENST00000424804 PKD2L1Q9P0L9 805 aa14.84□□□□□ -0.03
VRK3-203ENST00000424804 GOLGA8AA7E2F4 631 aa14.83□□□□□ -0.04
VRK3-203ENST00000424804 GOLGA8BA8MQT2 603 aa14.83□□□□□ -0.04
VRK3-203ENST00000424804 STXBP3O00186 592 aa14.83□□□□□ -0.04
VRK3-203ENST00000424804 ZBTB43O43298 467 aa14.83□□□□□ -0.04
VRK3-203ENST00000424804 INSRRP14616 1297 aa14.83□□□□□ -0.04
VRK3-203ENST00000424804 PSMA5P28066 241 aa14.83□□□□□ -0.04
VRK3-203ENST00000424804 CDC27P30260 824 aa14.83□□□□□ -0.04
VRK3-203ENST00000424804 APOBRQ0VD83 1088 aa14.83□□□□□ -0.04
VRK3-203ENST00000424804 TAF2Q6P1X5 1199 aa14.83□□□□□ -0.04
VRK3-203ENST00000424804 HEATR3Q7Z4Q2 680 aa14.83□□□□□ -0.04
VRK3-203ENST00000424804 NEK9Q8TD19 979 aa14.83□□□□□ -0.04
VRK3-203ENST00000424804 CRYGNQ8WXF5 182 aa14.83□□□□□ -0.04
VRK3-203ENST00000424804 YME1L1Q96TA2 773 aa14.83□□□□□ -0.04
VRK3-203ENST00000424804 SMARCAD1Q9H4L7 1026 aa14.83□□□□□ -0.04
VRK3-203ENST00000424804 CDY2AQ9Y6F7 541 aa14.83□□□□□ -0.04
VRK3-203ENST00000424804 V9GY48 417 aaPredicted RBP14.83□□□□□ -0.04
VRK3-203ENST00000424804 IGKV6D-21A0A0A0MT36 114 aa14.82□□□□□ -0.04
VRK3-203ENST00000424804 SPDYE3A6NKU9 549 aa14.82□□□□□ -0.04
VRK3-203ENST00000424804 C5orf67F2Z3F1 127 aa14.82□□□□□ -0.04
VRK3-203ENST00000424804 MEIS1O00470 390 aa14.82□□□□□ -0.04
VRK3-203ENST00000424804 RPS6KB1P23443 525 aa14.82□□□□□ -0.04
VRK3-203ENST00000424804 GPM6BQ13491 265 aa14.82□□□□□ -0.04
VRK3-203ENST00000424804 PLCB4Q15147 1175 aa14.82□□□□□ -0.04
VRK3-203ENST00000424804 RTN1Q16799 776 aa14.82□□□□□ -0.04
VRK3-203ENST00000424804 FAM178BQ8IXR5 827 aa14.82□□□□□ -0.04
VRK3-203ENST00000424804 KCNB2Q92953 911 aa14.82□□□□□ -0.04
VRK3-203ENST00000424804 CLP1Q92989 425 aaKnown RBP14.82□□□□□ -0.04
VRK3-203ENST00000424804 BRF1Q92994 677 aa14.82□□□□□ -0.04
VRK3-203ENST00000424804 AGO4Q9HCK5 861 aaKnown RBP14.82□□□□□ -0.04
VRK3-203ENST00000424804 TMEM260Q9NX78 707 aa14.82□□□□□ -0.04
VRK3-203ENST00000424804 SLC9A2Q9UBY0 812 aa14.82□□□□□ -0.04
VRK3-203ENST00000424804 TUBE1Q9UJT0 475 aa14.82□□□□□ -0.04
VRK3-203ENST00000424804 NFASCO94856 1347 aa14.82□□□□□ -0.04
VRK3-203ENST00000424804 EVPLQ92817 2033 aa14.82□□□□□ -0.04
VRK3-203ENST00000424804 C5orf42Q9H799 3197 aa14.81□□□□□ -0.04
VRK3-203ENST00000424804 KIAA1671Q9BY89 1806 aa14.81□□□□□ -0.04
VRK3-203ENST00000424804 POTEB3A0JP26 581 aa14.81□□□□□ -0.04
VRK3-203ENST00000424804 DHX15O43143 795 aaKnown RBP14.81□□□□□ -0.04
VRK3-203ENST00000424804 EDIL3O43854 480 aa14.81□□□□□ -0.04
VRK3-203ENST00000424804 CCNE2O96020 404 aa14.81□□□□□ -0.04
VRK3-203ENST00000424804 IL9P15248 144 aa14.81□□□□□ -0.04
VRK3-203ENST00000424804 LTBRP36941 435 aa14.81□□□□□ -0.04
VRK3-203ENST00000424804 ACTR2P61160 394 aa14.81□□□□□ -0.04
VRK3-203ENST00000424804 CAMK1Q14012 370 aa14.81□□□□□ -0.04
VRK3-203ENST00000424804 TCEAL5Q5H9L2 206 aa14.81□□□□□ -0.04
VRK3-203ENST00000424804 POTEBQ6S5H4 581 aa14.81□□□□□ -0.04
VRK3-203ENST00000424804 PLPPR4Q7Z2D5 763 aa14.81□□□□□ -0.04
VRK3-203ENST00000424804 TRAPPC12Q8WVT3 735 aa14.81□□□□□ -0.04
VRK3-203ENST00000424804 GLG1Q92896 1179 aa14.81□□□□□ -0.04
VRK3-203ENST00000424804 IL17RAQ96F46 866 aa14.81□□□□□ -0.04
VRK3-203ENST00000424804 LRFN3Q9BTN0 628 aa14.81□□□□□ -0.04
VRK3-203ENST00000424804 JPH1Q9HDC5 661 aaPredicted RBP14.81□□□□□ -0.04
VRK3-203ENST00000424804 RBM28Q9NW13 759 aaKnown RBP14.81□□□□□ -0.04
VRK3-203ENST00000424804 PCDHA2Q9Y5H9 948 aa14.81□□□□□ -0.04
VRK3-203ENST00000424804 WDR81Q562E7 1941 aa14.8□□□□□ -0.04
VRK3-203ENST00000424804 GRXCR2A6NFK2 248 aa14.8□□□□□ -0.04
VRK3-203ENST00000424804 RRN3P2A6NIE6 340 aa14.8□□□□□ -0.04
VRK3-203ENST00000424804 GRM6O15303 877 aa14.8□□□□□ -0.04
VRK3-203ENST00000424804 DGKIO75912 1065 aa14.8□□□□□ -0.04
VRK3-203ENST00000424804 ATP4AP20648 1035 aa14.8□□□□□ -0.04
VRK3-203ENST00000424804 KCNA5P22460 613 aa14.8□□□□□ -0.04
VRK3-203ENST00000424804 CD52P31358 61 aa14.8□□□□□ -0.04
VRK3-203ENST00000424804 BMPR1AP36894 532 aa14.8□□□□□ -0.04
VRK3-203ENST00000424804 SREBF1P36956 1147 aa14.8□□□□□ -0.04
VRK3-203ENST00000424804 METAP2P50579 478 aaKnown RBP eCLIP14.8□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms