RNA–Protein interactions for RNA: ENST00000423982.6

MSH5-206, Transcript of mutS homolog 5, humanhuman

TSL 5

Gene MSH5, Length 2,706 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-206ENST00000423982 PPANQ9NQ55 473 aaKnown RBP15.76■□□□□ 0.11
MSH5-206ENST00000423982 TNFRSF8P28908 595 aa15.75■□□□□ 0.11
MSH5-206ENST00000423982 PRPHP41219 470 aa15.75■□□□□ 0.11
MSH5-206ENST00000423982 IFT88Q13099 833 aa15.75■□□□□ 0.11
MSH5-206ENST00000423982 PTGISQ16647 500 aa15.75■□□□□ 0.11
MSH5-206ENST00000423982 TBCKQ8TEA7 893 aa15.75■□□□□ 0.11
MSH5-206ENST00000423982 PNMA5Q96PV4 448 aa15.75■□□□□ 0.11
MSH5-206ENST00000423982 CCT8L2Q96SF2 557 aa15.75■□□□□ 0.11
MSH5-206ENST00000423982 FGFBP2Q9BYJ0 223 aa15.75■□□□□ 0.11
MSH5-206ENST00000423982 TBC1D7Q9P0N9 293 aa15.75■□□□□ 0.11
MSH5-206ENST00000423982 PLAAQ9Y263 795 aa15.75■□□□□ 0.11
MSH5-206ENST00000423982 FAM170AA1A519 330 aa15.75■□□□□ 0.11
MSH5-206ENST00000423982 SMCO2A6NFE2 343 aa15.75■□□□□ 0.11
MSH5-206ENST00000423982 PPP1R37O75864 691 aa15.75■□□□□ 0.11
MSH5-206ENST00000423982 NOL4O94818 638 aa15.75■□□□□ 0.11
MSH5-206ENST00000423982 DLGAP5Q15398 846 aa15.75■□□□□ 0.11
MSH5-206ENST00000423982 SPRED3Q2MJR0 410 aa15.75■□□□□ 0.11
MSH5-206ENST00000423982 NBPF9Q3BBW0 867 aa15.75■□□□□ 0.11
MSH5-206ENST00000423982 SAMD7Q7Z3H4 446 aa15.75■□□□□ 0.11
MSH5-206ENST00000423982 TBC1D5Q92609 795 aa15.75■□□□□ 0.11
MSH5-206ENST00000423982 TMEM47Q9BQJ4 181 aa15.75■□□□□ 0.11
MSH5-206ENST00000423982 JPH2Q9BR39 696 aaPredicted RBP15.75■□□□□ 0.11
MSH5-206ENST00000423982 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP15.75■□□□□ 0.11
MSH5-206ENST00000423982 CUEDC2Q9H467 287 aa15.75■□□□□ 0.11
MSH5-206ENST00000423982 SERPINA10Q9UK55 444 aa15.75■□□□□ 0.11
MSH5-206ENST00000423982 KLRF2D3W0D1 207 aa15.74■□□□□ 0.11
MSH5-206ENST00000423982 E7EVH7 732 aa15.74■□□□□ 0.11
MSH5-206ENST00000423982 GMPSP49915 693 aaPredicted RBP15.74■□□□□ 0.11
MSH5-206ENST00000423982 EIF6P56537 245 aaKnown RBP15.74■□□□□ 0.11
MSH5-206ENST00000423982 POLR2FP61218 127 aaKnown RBP15.74■□□□□ 0.11
MSH5-206ENST00000423982 PAK2Q13177 524 aa15.74■□□□□ 0.11
MSH5-206ENST00000423982 GPR162Q16538 588 aa15.74■□□□□ 0.11
MSH5-206ENST00000423982 TBC1D10BQ4KMP7 808 aaPredicted RBP15.74■□□□□ 0.11
MSH5-206ENST00000423982 B4GALNT4Q76KP1 1039 aa15.74■□□□□ 0.11
MSH5-206ENST00000423982 SV2BQ7L1I2 683 aa15.74■□□□□ 0.11
MSH5-206ENST00000423982 NLRP14Q86W24 1093 aa15.74■□□□□ 0.11
MSH5-206ENST00000423982 MYCBPAPQ8TBZ2 947 aa15.74■□□□□ 0.11
MSH5-206ENST00000423982 GMLQ99445 158 aa15.74■□□□□ 0.11
MSH5-206ENST00000423982 RNF181Q9P0P0 153 aa15.74■□□□□ 0.11
MSH5-206ENST00000423982 A0A087X0T9 212 aa15.74■□□□□ 0.11
MSH5-206ENST00000423982 FAM228BP0C875 321 aa15.74■□□□□ 0.11
MSH5-206ENST00000423982 NONOQ15233 471 aaKnown RBP eCLIP15.74■□□□□ 0.11
MSH5-206ENST00000423982 USP17L2Q6R6M4 530 aa15.74■□□□□ 0.11
MSH5-206ENST00000423982 DAGLBQ8NCG7 672 aa15.74■□□□□ 0.11
MSH5-206ENST00000423982 RUBCNQ92622 972 aa15.74■□□□□ 0.11
MSH5-206ENST00000423982 ATP6V1G3Q96LB4 118 aa15.74■□□□□ 0.11
MSH5-206ENST00000423982 AK8Q96MA6 479 aa15.74■□□□□ 0.11
MSH5-206ENST00000423982 HDAC9Q9UKV0 1011 aa15.74■□□□□ 0.11
MSH5-206ENST00000423982 LAMB1P07942 1786 aa15.74■□□□□ 0.11
MSH5-206ENST00000423982 LAD1O00515 517 aa15.74■□□□□ 0.11
MSH5-206ENST00000423982 TSPY3P0CV98 308 aa15.74■□□□□ 0.11
MSH5-206ENST00000423982 TSPY8P0CW00 308 aa15.74■□□□□ 0.11
MSH5-206ENST00000423982 MDH1P40925 334 aaKnown RBP15.74■□□□□ 0.11
MSH5-206ENST00000423982 HLTFQ14527 1009 aaKnown RBP eCLIP15.74■□□□□ 0.11
MSH5-206ENST00000423982 CCDC84Q86UT8 332 aaPredicted RBP15.74■□□□□ 0.11
MSH5-206ENST00000423982 DGKHQ86XP1 1220 aa15.74■□□□□ 0.11
MSH5-206ENST00000423982 CDAN1Q8IWY9 1227 aa15.74■□□□□ 0.11
MSH5-206ENST00000423982 CALML4Q96GE6 196 aa15.74■□□□□ 0.11
MSH5-206ENST00000423982 INPP4AQ96PE3 977 aaPredicted RBP15.74■□□□□ 0.11
MSH5-206ENST00000423982 ADAMTS1Q9UHI8 967 aa15.74■□□□□ 0.11
MSH5-206ENST00000423982 ASTN2O75129 1339 aaPredicted RBP15.73■□□□□ 0.11
MSH5-206ENST00000423982 SPDYE2BA6NHP3 402 aa15.73■□□□□ 0.11
MSH5-206ENST00000423982 SLC37A4O43826 429 aa15.73■□□□□ 0.11
MSH5-206ENST00000423982 SPDYE6P0CI01 402 aa15.73■□□□□ 0.11
MSH5-206ENST00000423982 TMOD1P28289 359 aa15.73■□□□□ 0.11
MSH5-206ENST00000423982 ERVK-9P63128 1117 aa15.73■□□□□ 0.11
MSH5-206ENST00000423982 AMPD3Q01432 767 aa15.73■□□□□ 0.11
MSH5-206ENST00000423982 ITGB3BPQ13352 177 aaPredicted RBP15.73■□□□□ 0.11
MSH5-206ENST00000423982 FAM83BQ5T0W9 1011 aa15.73■□□□□ 0.11
MSH5-206ENST00000423982 NEK8Q86SG6 692 aa15.73■□□□□ 0.11
MSH5-206ENST00000423982 MICALL2Q8IY33 904 aa15.73■□□□□ 0.11
MSH5-206ENST00000423982 LSM14BQ9BX40 385 aaKnown RBP15.73■□□□□ 0.11
MSH5-206ENST00000423982 LRRC4CQ9HCJ2 640 aa15.73■□□□□ 0.11
MSH5-206ENST00000423982 FAM198AQ9UFP1 575 aa15.73■□□□□ 0.11
MSH5-206ENST00000423982 DDTLA6NHG4 134 aaPredicted RBP15.73■□□□□ 0.11
MSH5-206ENST00000423982 TDP2O95551 362 aa15.73■□□□□ 0.11
MSH5-206ENST00000423982 ECM1Q16610 540 aa15.73■□□□□ 0.11
MSH5-206ENST00000423982 KIAA0753Q2KHM9 967 aa15.73■□□□□ 0.11
MSH5-206ENST00000423982 UNC13DQ70J99 1090 aa15.73■□□□□ 0.11
MSH5-206ENST00000423982 CLEC10AQ8IUN9 316 aa15.73■□□□□ 0.11
MSH5-206ENST00000423982 LARP4BQ92615 738 aaKnown RBP15.73■□□□□ 0.11
MSH5-206ENST00000423982 ZMYND12Q9H0C1 365 aa15.73■□□□□ 0.11
MSH5-206ENST00000423982 NEUROG2Q9H2A3 272 aa15.73■□□□□ 0.11
MSH5-206ENST00000423982 MAGEF1Q9HAY2 307 aa15.73■□□□□ 0.11
MSH5-206ENST00000423982 PALM3A6NDB9 673 aaPredicted RBP15.72■□□□□ 0.11
MSH5-206ENST00000423982 FSBPO95073 299 aa15.72■□□□□ 0.11
MSH5-206ENST00000423982 FKBP1AP62942 108 aaKnown RBP15.72■□□□□ 0.11
MSH5-206ENST00000423982 CACNB1Q02641 598 aaPredicted RBP15.72■□□□□ 0.11
MSH5-206ENST00000423982 RAPGEF1Q13905 1077 aa15.72■□□□□ 0.11
MSH5-206ENST00000423982 SHROOM1Q2M3G4 852 aaPredicted RBP15.72■□□□□ 0.11
MSH5-206ENST00000423982 SBK1Q52WX2 424 aa15.72■□□□□ 0.11
MSH5-206ENST00000423982 GLE1Q53GS7 698 aaKnown RBP15.72■□□□□ 0.11
MSH5-206ENST00000423982 CHADLQ6NUI6 762 aa15.72■□□□□ 0.11
MSH5-206ENST00000423982 NELFCDQ8IXH7 590 aa15.72■□□□□ 0.11
MSH5-206ENST00000423982 FAM133AQ8N9E0 248 aa15.72■□□□□ 0.11
MSH5-206ENST00000423982 DDX12PQ92771 950 aa15.72■□□□□ 0.11
MSH5-206ENST00000423982 CABS1Q96KC9 395 aa15.72■□□□□ 0.11
MSH5-206ENST00000423982 AP1M1Q9BXS5 423 aa15.72■□□□□ 0.11
MSH5-206ENST00000423982 UBA5Q9GZZ9 404 aa15.72■□□□□ 0.11
MSH5-206ENST00000423982 MYO3BQ8WXR4 1341 aa15.72■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms