RNA–Protein interactions for RNA: ENST00000423965.2

CLCN3P1-201, Transcript of chloride voltage-gated channel 3 pseudogene 1, humanhuman

BASIC

Gene CLCN3P1, Length 1,017 nt, Biotype transcribed unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3P1-201ENST00000423965 SEPT8Q92599 483 aa9.42□□□□□ -0.9
CLCN3P1-201ENST00000423965 KIFC2Q96AC6 838 aa9.42□□□□□ -0.9
CLCN3P1-201ENST00000423965 NUP88Q99567 741 aaPredicted RBP9.42□□□□□ -0.9
CLCN3P1-201ENST00000423965 IFIH1Q9BYX4 1025 aaKnown RBP9.42□□□□□ -0.9
CLCN3P1-201ENST00000423965 CRNKL1Q9BZJ0 848 aaKnown RBP9.42□□□□□ -0.9
CLCN3P1-201ENST00000423965 GPR108Q9NPR9 543 aa9.42□□□□□ -0.9
CLCN3P1-201ENST00000423965 HOMER2Q9NSB8 354 aa9.42□□□□□ -0.9
CLCN3P1-201ENST00000423965 PGPEP1Q9NXJ5 209 aa9.42□□□□□ -0.9
CLCN3P1-201ENST00000423965 GTF2IRD1Q9UHL9 959 aa9.42□□□□□ -0.9
CLCN3P1-201ENST00000423965 BARX2Q9UMQ3 279 aaPredicted RBP9.42□□□□□ -0.9
CLCN3P1-201ENST00000423965 NLRC5Q86WI3 1866 aa9.42□□□□□ -0.9
CLCN3P1-201ENST00000423965 SRGAP3O43295 1099 aa9.41□□□□□ -0.9
CLCN3P1-201ENST00000423965 NDUFB10O96000 172 aa9.41□□□□□ -0.9
CLCN3P1-201ENST00000423965 NRIP1P48552 1158 aa9.41□□□□□ -0.9
CLCN3P1-201ENST00000423965 CDK8P49336 464 aa9.41□□□□□ -0.9
CLCN3P1-201ENST00000423965 COL9A3Q14050 684 aaPredicted RBP9.41□□□□□ -0.9
CLCN3P1-201ENST00000423965 TMEM132AQ24JP5 1023 aa9.41□□□□□ -0.9
CLCN3P1-201ENST00000423965 INTS6LQ5JSJ4 861 aaKnown RBP9.41□□□□□ -0.9
CLCN3P1-201ENST00000423965 CWF19L1Q69YN2 538 aaKnown RBP9.41□□□□□ -0.9
CLCN3P1-201ENST00000423965 RPAP2Q8IXW5 612 aaPredicted RBP9.41□□□□□ -0.9
CLCN3P1-201ENST00000423965 LRRC47Q8N1G4 583 aaKnown RBP9.41□□□□□ -0.9
CLCN3P1-201ENST00000423965 FLCNQ8NFG4 579 aa9.41□□□□□ -0.9
CLCN3P1-201ENST00000423965 ATP8B4Q8TF62 1192 aa9.41□□□□□ -0.9
CLCN3P1-201ENST00000423965 DYNLL2Q96FJ2 89 aa9.41□□□□□ -0.9
CLCN3P1-201ENST00000423965 NEK1Q96PY6 1258 aa9.41□□□□□ -0.9
CLCN3P1-201ENST00000423965 PURBQ96QR8 312 aaKnown RBP9.41□□□□□ -0.9
CLCN3P1-201ENST00000423965 CDCA3Q99618 268 aaPredicted RBP9.41□□□□□ -0.9
CLCN3P1-201ENST00000423965 S1PR5Q9H228 398 aa9.41□□□□□ -0.9
CLCN3P1-201ENST00000423965 DCP1AQ9NPI6 582 aaPredicted RBP9.41□□□□□ -0.9
CLCN3P1-201ENST00000423965 IGSF5Q9NSI5 407 aa9.41□□□□□ -0.9
CLCN3P1-201ENST00000423965 RNF146Q9NTX7 359 aa9.41□□□□□ -0.9
CLCN3P1-201ENST00000423965 CYP39A1Q9NYL5 469 aa9.41□□□□□ -0.9
CLCN3P1-201ENST00000423965 ADD3Q9UEY8 706 aaKnown RBP9.41□□□□□ -0.9
CLCN3P1-201ENST00000423965 R4GN57 208 aa9.41□□□□□ -0.9
CLCN3P1-201ENST00000423965 ATG2AQ2TAZ0 1938 aa9.41□□□□□ -0.9
CLCN3P1-201ENST00000423965 LOC101059915A0A1B0GWI6 518 aaPredicted RBP9.4□□□□□ -0.9
CLCN3P1-201ENST00000423965 RSPH10B2B2RC85 870 aa9.4□□□□□ -0.9
CLCN3P1-201ENST00000423965 PI15O43692 258 aa9.4□□□□□ -0.9
CLCN3P1-201ENST00000423965 RSPH10BP0C881 870 aa9.4□□□□□ -0.9
CLCN3P1-201ENST00000423965 SNRPBP14678 240 aaKnown RBP9.4□□□□□ -0.9
CLCN3P1-201ENST00000423965 CHMP4BP1P59074 171 aa9.4□□□□□ -0.9
CLCN3P1-201ENST00000423965 LMNB2Q03252 620 aa9.4□□□□□ -0.9
CLCN3P1-201ENST00000423965 G3BP1Q13283 466 aaKnown RBP eCLIP9.4□□□□□ -0.9
CLCN3P1-201ENST00000423965 MTX1Q13505 466 aa9.4□□□□□ -0.9
CLCN3P1-201ENST00000423965 PPP2R5BQ15173 497 aa9.4□□□□□ -0.9
CLCN3P1-201ENST00000423965 TMEM184AQ6ZMB5 413 aa9.4□□□□□ -0.9
CLCN3P1-201ENST00000423965 ADGRD2Q7Z7M1 963 aa9.4□□□□□ -0.9
CLCN3P1-201ENST00000423965 C7orf31Q8N865 590 aa9.4□□□□□ -0.9
CLCN3P1-201ENST00000423965 SPPL3Q8TCT6 385 aa9.4□□□□□ -0.9
CLCN3P1-201ENST00000423965 SCFD2Q8WU76 684 aa9.4□□□□□ -0.9
CLCN3P1-201ENST00000423965 ZFP42Q96MM3 310 aa9.4□□□□□ -0.9
CLCN3P1-201ENST00000423965 TRERF1Q96PN7 1200 aa9.4□□□□□ -0.9
CLCN3P1-201ENST00000423965 TLE6Q9H808 572 aa9.4□□□□□ -0.9
CLCN3P1-201ENST00000423965 NYAP2Q9P242 653 aa9.4□□□□□ -0.9
CLCN3P1-201ENST00000423965 DDX49Q9Y6V7 483 aaKnown RBP9.4□□□□□ -0.9
CLCN3P1-201ENST00000423965 ASH1LQ9NR48 2969 aaKnown RBP9.4□□□□□ -0.9
CLCN3P1-201ENST00000423965 UNC79Q9P2D8 2635 aa9.4□□□□□ -0.9
CLCN3P1-201ENST00000423965 DCDC2BA2VCK2 349 aa9.39□□□□□ -0.91
CLCN3P1-201ENST00000423965 SRGAP2BP0DMP2 458 aa9.39□□□□□ -0.91
CLCN3P1-201ENST00000423965 CYP2D6P10635 497 aa9.39□□□□□ -0.91
CLCN3P1-201ENST00000423965 NPR3P17342 541 aa9.39□□□□□ -0.91
CLCN3P1-201ENST00000423965 CASTP20810 708 aaKnown RBP9.39□□□□□ -0.91
CLCN3P1-201ENST00000423965 C6orf118Q5T5N4 469 aa9.39□□□□□ -0.91
CLCN3P1-201ENST00000423965 C16orf86Q6ZW13 317 aa9.39□□□□□ -0.91
CLCN3P1-201ENST00000423965 RBM23Q86U06 439 aaKnown RBP9.39□□□□□ -0.91
CLCN3P1-201ENST00000423965 SUMF1Q8NBK3 374 aa9.39□□□□□ -0.91
CLCN3P1-201ENST00000423965 KAT2BQ92831 832 aa9.39□□□□□ -0.91
CLCN3P1-201ENST00000423965 APBB2Q92870 758 aa9.39□□□□□ -0.91
CLCN3P1-201ENST00000423965 HDAC6Q9UBN7 1215 aa9.39□□□□□ -0.91
CLCN3P1-201ENST00000423965 CEP295Q9C0D2 2601 aa9.39□□□□□ -0.91
CLCN3P1-201ENST00000423965 GCN1Q92616 2671 aaKnown RBP9.38□□□□□ -0.91
CLCN3P1-201ENST00000423965 NAV1Q8NEY1 1877 aa9.38□□□□□ -0.91
CLCN3P1-201ENST00000423965 ADGRA3Q8IWK6 1321 aa9.38□□□□□ -0.91
CLCN3P1-201ENST00000423965 ZZEF1O43149 2961 aa9.38□□□□□ -0.91
CLCN3P1-201ENST00000423965 E9PSI1 815 aa9.38□□□□□ -0.91
CLCN3P1-201ENST00000423965 HOXB8P17481 243 aaPredicted RBP9.38□□□□□ -0.91
CLCN3P1-201ENST00000423965 DNAJB1P25685 340 aa9.38□□□□□ -0.91
CLCN3P1-201ENST00000423965 ABL2P42684 1182 aa9.38□□□□□ -0.91
CLCN3P1-201ENST00000423965 MCM6Q14566 821 aa9.38□□□□□ -0.91
CLCN3P1-201ENST00000423965 C12orf60Q5U649 245 aa9.38□□□□□ -0.91
CLCN3P1-201ENST00000423965 ZNF775Q96BV0 537 aaPredicted RBP9.38□□□□□ -0.91
CLCN3P1-201ENST00000423965 NECTIN4Q96NY8 510 aa9.38□□□□□ -0.91
CLCN3P1-201ENST00000423965 DBNDD2Q9BQY9 259 aa9.38□□□□□ -0.91
CLCN3P1-201ENST00000423965 KATNAL1Q9BW62 490 aa9.38□□□□□ -0.91
CLCN3P1-201ENST00000423965 RC3H2Q9HBD1 1191 aaKnown RBP9.38□□□□□ -0.91
CLCN3P1-201ENST00000423965 GDPD2Q9HCC8 539 aa9.38□□□□□ -0.91
CLCN3P1-201ENST00000423965 ATP8A2Q9NTI2 1148 aa9.38□□□□□ -0.91
CLCN3P1-201ENST00000423965 SYNPO2Q9UMS6 1093 aa9.38□□□□□ -0.91
CLCN3P1-201ENST00000423965 CNOT1A5YKK6 2376 aaKnown RBP9.38□□□□□ -0.91
CLCN3P1-201ENST00000423965 MYO5AQ9Y4I1 1855 aaKnown RBP9.38□□□□□ -0.91
CLCN3P1-201ENST00000423965 ITGB1P05556 798 aa9.37□□□□□ -0.91
CLCN3P1-201ENST00000423965 TXNP10599 105 aaKnown RBP9.37□□□□□ -0.91
CLCN3P1-201ENST00000423965 BMP2P12643 396 aa9.37□□□□□ -0.91
CLCN3P1-201ENST00000423965 ALAS1P13196 640 aa9.37□□□□□ -0.91
CLCN3P1-201ENST00000423965 THPOP40225 353 aa9.37□□□□□ -0.91
CLCN3P1-201ENST00000423965 ALDH5A1P51649 535 aaPredicted RBP9.37□□□□□ -0.91
CLCN3P1-201ENST00000423965 PDE4BQ07343 736 aa9.37□□□□□ -0.91
CLCN3P1-201ENST00000423965 BTG3Q14201 252 aaPredicted RBP9.37□□□□□ -0.91
CLCN3P1-201ENST00000423965 AMOTL1Q8IY63 956 aa9.37□□□□□ -0.91
CLCN3P1-201ENST00000423965 ZDHHC14Q8IZN3 488 aa9.37□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 277.2 ms