RNA–Protein interactions for RNA: ENST00000422544.2

PDGFC-202, Transcript of platelet derived growth factor C, humanhuman

TSL 5 BASIC

Gene PDGFC, Length 849 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFC-202ENST00000422544 TECP42680 631 aa10.45□□□□□ -0.74
PDGFC-202ENST00000422544 PSEN2P49810 448 aa10.45□□□□□ -0.74
PDGFC-202ENST00000422544 STAT5BP51692 787 aa10.45□□□□□ -0.74
PDGFC-202ENST00000422544 PPP2R5CQ13362 524 aa10.45□□□□□ -0.74
PDGFC-202ENST00000422544 ITGA7Q13683 1181 aa10.45□□□□□ -0.74
PDGFC-202ENST00000422544 MFSD10Q14728 455 aa10.45□□□□□ -0.74
PDGFC-202ENST00000422544 LRRC26Q2I0M4 334 aa10.45□□□□□ -0.74
PDGFC-202ENST00000422544 KIAA0753Q2KHM9 967 aa10.45□□□□□ -0.74
PDGFC-202ENST00000422544 NBPF20Q3BBV1 942 aa10.45□□□□□ -0.74
PDGFC-202ENST00000422544 FOXD4L6Q3SYB3 417 aaPredicted RBP10.45□□□□□ -0.74
PDGFC-202ENST00000422544 NCAPH2Q6IBW4 605 aa10.45□□□□□ -0.74
PDGFC-202ENST00000422544 B3GNT9Q6UX72 402 aa10.45□□□□□ -0.74
PDGFC-202ENST00000422544 FOXD4L3Q6VB84 417 aaPredicted RBP10.45□□□□□ -0.74
PDGFC-202ENST00000422544 Q7L0L9 218 aa10.45□□□□□ -0.74
PDGFC-202ENST00000422544 MIER3Q7Z3K6 550 aa10.45□□□□□ -0.74
PDGFC-202ENST00000422544 SMAP1Q8IYB5 467 aaPredicted RBP10.45□□□□□ -0.74
PDGFC-202ENST00000422544 FTOQ9C0B1 505 aaKnown RBP eCLIP10.45□□□□□ -0.74
PDGFC-202ENST00000422544 SMARCAD1Q9H4L7 1026 aa10.45□□□□□ -0.74
PDGFC-202ENST00000422544 TUT1Q9H6E5 874 aaKnown RBP10.45□□□□□ -0.74
PDGFC-202ENST00000422544 AZI2Q9H6S1 392 aa10.45□□□□□ -0.74
PDGFC-202ENST00000422544 TTC12Q9H892 705 aaPredicted RBP10.45□□□□□ -0.74
PDGFC-202ENST00000422544 GABBR1Q9UBS5 961 aa10.45□□□□□ -0.74
PDGFC-202ENST00000422544 PCDHA10Q9Y5I2 948 aa10.45□□□□□ -0.74
PDGFC-202ENST00000422544 CLIC4Q9Y696 253 aa10.45□□□□□ -0.74
PDGFC-202ENST00000422544 CHD9Q3L8U1 2897 aa10.45□□□□□ -0.74
PDGFC-202ENST00000422544 IGKV6D-21A0A0A0MT36 114 aa10.44□□□□□ -0.74
PDGFC-202ENST00000422544 A0A0U1RQG5 324 aaPredicted RBP10.44□□□□□ -0.74
PDGFC-202ENST00000422544 ARVCFO00192 962 aa10.44□□□□□ -0.74
PDGFC-202ENST00000422544 HAS3O00219 553 aa10.44□□□□□ -0.74
PDGFC-202ENST00000422544 SFNP31947 248 aa10.44□□□□□ -0.74
PDGFC-202ENST00000422544 DDIT3P35638 169 aa10.44□□□□□ -0.74
PDGFC-202ENST00000422544 CDK7P50613 346 aa10.44□□□□□ -0.74
PDGFC-202ENST00000422544 JAK3P52333 1124 aa10.44□□□□□ -0.74
PDGFC-202ENST00000422544 CEBPZQ03701 1054 aaKnown RBP10.44□□□□□ -0.74
PDGFC-202ENST00000422544 SPIRE1Q08AE8 756 aa10.44□□□□□ -0.74
PDGFC-202ENST00000422544 SF3A1Q15459 793 aaKnown RBP10.44□□□□□ -0.74
PDGFC-202ENST00000422544 IL17AQ16552 155 aa10.44□□□□□ -0.74
PDGFC-202ENST00000422544 FAM47CQ5HY64 1035 aa10.44□□□□□ -0.74
PDGFC-202ENST00000422544 PLPPR4Q7Z2D5 763 aa10.44□□□□□ -0.74
PDGFC-202ENST00000422544 CCDC60Q8IWA6 550 aaPredicted RBP10.44□□□□□ -0.74
PDGFC-202ENST00000422544 DPF3Q92784 378 aa10.44□□□□□ -0.74
PDGFC-202ENST00000422544 GDF15Q99988 308 aa10.44□□□□□ -0.74
PDGFC-202ENST00000422544 KATNAL1Q9BW62 490 aa10.44□□□□□ -0.74
PDGFC-202ENST00000422544 COL25A1Q9BXS0 654 aaPredicted RBP10.44□□□□□ -0.74
PDGFC-202ENST00000422544 RNPEPQ9H4A4 650 aa10.44□□□□□ -0.74
PDGFC-202ENST00000422544 ZNF302Q9NR11 478 aa10.44□□□□□ -0.74
PDGFC-202ENST00000422544 TFIP11Q9UBB9 837 aaKnown RBP10.44□□□□□ -0.74
PDGFC-202ENST00000422544 BDP1A6H8Y1 2624 aa10.43□□□□□ -0.74
PDGFC-202ENST00000422544 NCOR1O75376 2440 aa10.43□□□□□ -0.74
PDGFC-202ENST00000422544 LAD1O00515 517 aa10.43□□□□□ -0.74
PDGFC-202ENST00000422544 RTP1P59025 263 aa10.43□□□□□ -0.74
PDGFC-202ENST00000422544 ATP2C1P98194 919 aaPredicted RBP10.43□□□□□ -0.74
PDGFC-202ENST00000422544 EPHA7Q15375 998 aa10.43□□□□□ -0.74
PDGFC-202ENST00000422544 TRIM60Q495X7 471 aa10.43□□□□□ -0.74
PDGFC-202ENST00000422544 FAM160B1Q5W0V3 765 aa10.43□□□□□ -0.74
PDGFC-202ENST00000422544 PDXDC2PQ6P474 469 aa10.43□□□□□ -0.74
PDGFC-202ENST00000422544 NFRKBQ6P4R8 1299 aa10.43□□□□□ -0.74
PDGFC-202ENST00000422544 DTHD1Q6ZMT9 781 aa10.43□□□□□ -0.74
PDGFC-202ENST00000422544 TRMT1LQ7Z2T5 733 aaKnown RBP10.43□□□□□ -0.74
PDGFC-202ENST00000422544 CKAP2LQ8IYA6 745 aa10.43□□□□□ -0.74
PDGFC-202ENST00000422544 C7orf31Q8N865 590 aa10.43□□□□□ -0.74
PDGFC-202ENST00000422544 SLC43A3Q8NBI5 491 aa10.43□□□□□ -0.74
PDGFC-202ENST00000422544 RDM1Q8NG50 284 aa10.43□□□□□ -0.74
PDGFC-202ENST00000422544 ZNF396Q96N95 335 aaPredicted RBP10.43□□□□□ -0.74
PDGFC-202ENST00000422544 USP28Q96RU2 1077 aa10.43□□□□□ -0.74
PDGFC-202ENST00000422544 HTATIP2Q9BUP3 242 aa10.43□□□□□ -0.74
PDGFC-202ENST00000422544 ERAP1Q9NZ08 941 aa10.43□□□□□ -0.74
PDGFC-202ENST00000422544 HDAC6Q9UBN7 1215 aa10.43□□□□□ -0.74
PDGFC-202ENST00000422544 ZNF215Q9UL58 517 aaPredicted RBP10.43□□□□□ -0.74
PDGFC-202ENST00000422544 ATP11BQ9Y2G3 1177 aa10.43□□□□□ -0.74
PDGFC-202ENST00000422544 MAFBQ9Y5Q3 323 aaPredicted RBP10.43□□□□□ -0.74
PDGFC-202ENST00000422544 EMSYQ7Z589 1322 aa10.42□□□□□ -0.74
PDGFC-202ENST00000422544 POTEMA6NI47 508 aa10.42□□□□□ -0.74
PDGFC-202ENST00000422544 PQBP1O60828 265 aaKnown RBP10.42□□□□□ -0.74
PDGFC-202ENST00000422544 BMP15O95972 392 aa10.42□□□□□ -0.74
PDGFC-202ENST00000422544 SMIM10L2AP0DMW4 78 aa10.42□□□□□ -0.74
PDGFC-202ENST00000422544 SMIM10L2BP0DMW5 78 aa10.42□□□□□ -0.74
PDGFC-202ENST00000422544 ATP4AP20648 1035 aa10.42□□□□□ -0.74
PDGFC-202ENST00000422544 PRPHP41219 470 aa10.42□□□□□ -0.74
PDGFC-202ENST00000422544 FXR2P51116 673 aaKnown RBP eCLIP10.42□□□□□ -0.74
PDGFC-202ENST00000422544 NUCB2P80303 420 aa10.42□□□□□ -0.74
PDGFC-202ENST00000422544 TLE2Q04725 743 aa10.42□□□□□ -0.74
PDGFC-202ENST00000422544 SNX17Q15036 470 aa10.42□□□□□ -0.74
PDGFC-202ENST00000422544 PLCB4Q15147 1175 aa10.42□□□□□ -0.74
PDGFC-202ENST00000422544 PTPAQ15257 358 aa10.42□□□□□ -0.74
PDGFC-202ENST00000422544 UGCGQ16739 394 aa10.42□□□□□ -0.74
PDGFC-202ENST00000422544 TMEM266Q2M3C6 531 aa10.42□□□□□ -0.74
PDGFC-202ENST00000422544 C1orf53Q5VUE5 145 aa10.42□□□□□ -0.74
PDGFC-202ENST00000422544 BANK1Q8NDB2 785 aa10.42□□□□□ -0.74
PDGFC-202ENST00000422544 AFAP1L1Q8TED9 768 aa10.42□□□□□ -0.74
PDGFC-202ENST00000422544 CHAMP1Q96JM3 812 aa10.42□□□□□ -0.74
PDGFC-202ENST00000422544 EIF2AK1Q9BQI3 630 aaKnown RBP10.42□□□□□ -0.74
PDGFC-202ENST00000422544 TRPV6Q9H1D0 765 aa10.42□□□□□ -0.74
PDGFC-202ENST00000422544 SETD4Q9NVD3 440 aa10.42□□□□□ -0.74
PDGFC-202ENST00000422544 RGL1Q9NZL6 768 aa10.42□□□□□ -0.74
PDGFC-202ENST00000422544 CEP131Q9UPN4 1083 aa10.42□□□□□ -0.74
PDGFC-202ENST00000422544 TRPC6Q9Y210 931 aa10.42□□□□□ -0.74
PDGFC-202ENST00000422544 A0A1W2PPC1 479 aa10.41□□□□□ -0.74
PDGFC-202ENST00000422544 POTEB3A0JP26 581 aa10.41□□□□□ -0.74
PDGFC-202ENST00000422544 VWA3AA6NCI4 1184 aa10.41□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms