RNA–Protein interactions for RNA: ENST00000421223.5

DDX56-203, Transcript of DEAD-box helicase 56, humanhuman

TSL 2

Gene DDX56, Length 3,028 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-203ENST00000421223 SAMD7Q7Z3H4 446 aa12.08□□□□□ -0.48
DDX56-203ENST00000421223 DNAAF5Q86Y56 855 aa12.08□□□□□ -0.48
DDX56-203ENST00000421223 FAM20AQ96MK3 541 aa12.08□□□□□ -0.48
DDX56-203ENST00000421223 ZNF577Q9BSK1 485 aa12.08□□□□□ -0.48
DDX56-203ENST00000421223 VCPKMTQ9H867 229 aa12.08□□□□□ -0.48
DDX56-203ENST00000421223 VGLL3A8MV65 326 aa12.07□□□□□ -0.48
DDX56-203ENST00000421223 FECHP22830 423 aa12.07□□□□□ -0.48
DDX56-203ENST00000421223 POLD1P28340 1107 aa12.07□□□□□ -0.48
DDX56-203ENST00000421223 CAP2P40123 477 aa12.07□□□□□ -0.48
DDX56-203ENST00000421223 KCNMA1Q12791 1236 aa12.07□□□□□ -0.48
DDX56-203ENST00000421223 RABGGTAQ92696 567 aa12.07□□□□□ -0.48
DDX56-203ENST00000421223 GDAP1L1Q96MZ0 367 aa12.07□□□□□ -0.48
DDX56-203ENST00000421223 SUGCTQ9HAC7 445 aa12.07□□□□□ -0.48
DDX56-203ENST00000421223 BCS1LQ9Y276 419 aa12.07□□□□□ -0.48
DDX56-203ENST00000421223 ASTN2O75129 1339 aaPredicted RBP12.07□□□□□ -0.48
DDX56-203ENST00000421223 USO1O60763 962 aaKnown RBP12.07□□□□□ -0.48
DDX56-203ENST00000421223 KIF20AO95235 890 aa12.07□□□□□ -0.48
DDX56-203ENST00000421223 EHHADHQ08426 723 aa12.07□□□□□ -0.48
DDX56-203ENST00000421223 KCNH2Q12809 1159 aa12.07□□□□□ -0.48
DDX56-203ENST00000421223 PRKG1Q13976 671 aa12.07□□□□□ -0.48
DDX56-203ENST00000421223 Q4G0T1 1027 aa12.07□□□□□ -0.48
DDX56-203ENST00000421223 ZNF771Q7L3S4 317 aaPredicted RBP12.07□□□□□ -0.48
DDX56-203ENST00000421223 HOOK2Q96ED9 719 aa12.07□□□□□ -0.48
DDX56-203ENST00000421223 RAVER2Q9HCJ3 691 aaKnown RBP12.07□□□□□ -0.48
DDX56-203ENST00000421223 PCDHA13Q9Y5I0 950 aa12.07□□□□□ -0.48
DDX56-203ENST00000421223 SAR1BQ9Y6B6 198 aa12.07□□□□□ -0.48
DDX56-203ENST00000421223 SORBS3O60504 671 aa12.06□□□□□ -0.48
DDX56-203ENST00000421223 NPM3O75607 178 aaKnown RBP12.06□□□□□ -0.48
DDX56-203ENST00000421223 MYCLP12524 364 aaPredicted RBP12.06□□□□□ -0.48
DDX56-203ENST00000421223 BAG6P46379 1132 aa12.06□□□□□ -0.48
DDX56-203ENST00000421223 CASP4P49662 377 aa12.06□□□□□ -0.48
DDX56-203ENST00000421223 MEA1Q16626 185 aa12.06□□□□□ -0.48
DDX56-203ENST00000421223 CIAPIN1Q6FI81 312 aa12.06□□□□□ -0.48
DDX56-203ENST00000421223 RSRC2Q7L4I2 434 aaKnown RBP12.06□□□□□ -0.48
DDX56-203ENST00000421223 FAM133AQ8N9E0 248 aa12.06□□□□□ -0.48
DDX56-203ENST00000421223 SYT2Q8N9I0 419 aaPredicted RBP12.06□□□□□ -0.48
DDX56-203ENST00000421223 PLEKHA4Q9H4M7 779 aa12.06□□□□□ -0.48
DDX56-203ENST00000421223 ZCCHC17Q9NP64 241 aaKnown RBP12.06□□□□□ -0.48
DDX56-203ENST00000421223 UTP3Q9NQZ2 479 aaKnown RBP eCLIP12.06□□□□□ -0.482e-10■■■■■ 195.6
DDX56-203ENST00000421223 RGS17Q9UGC6 210 aaPredicted RBP12.06□□□□□ -0.48
DDX56-203ENST00000421223 ARMCX3Q9UH62 379 aaPredicted RBP12.06□□□□□ -0.48
DDX56-203ENST00000421223 PLAGL2Q9UPG8 496 aa12.06□□□□□ -0.48
DDX56-203ENST00000421223 MRPL11Q9Y3B7 192 aaKnown RBP12.06□□□□□ -0.48
DDX56-203ENST00000421223 CNTNAP1P78357 1384 aa12.06□□□□□ -0.48
DDX56-203ENST00000421223 ATRNL1Q5VV63 1379 aa12.06□□□□□ -0.48
DDX56-203ENST00000421223 EIF3CLB5ME19 914 aaKnown RBP12.06□□□□□ -0.48
DDX56-203ENST00000421223 NFIBO00712 420 aa12.06□□□□□ -0.48
DDX56-203ENST00000421223 SLC9A1P19634 815 aa12.06□□□□□ -0.48
DDX56-203ENST00000421223 KCNA3P22001 575 aa12.06□□□□□ -0.48
DDX56-203ENST00000421223 PURBQ96QR8 312 aaKnown RBP12.06□□□□□ -0.48
DDX56-203ENST00000421223 SPAG5Q96R06 1193 aa12.06□□□□□ -0.48
DDX56-203ENST00000421223 PNKPQ96T60 521 aa12.06□□□□□ -0.48
DDX56-203ENST00000421223 MMS19Q96T76 1030 aa12.06□□□□□ -0.48
DDX56-203ENST00000421223 GMLQ99445 158 aa12.06□□□□□ -0.48
DDX56-203ENST00000421223 EIF3CQ99613 913 aaKnown RBP12.06□□□□□ -0.48
DDX56-203ENST00000421223 MYOZ2Q9NPC6 264 aa12.06□□□□□ -0.48
DDX56-203ENST00000421223 FHOD1Q9Y613 1164 aa12.06□□□□□ -0.48
DDX56-203ENST00000421223 FLOT1O75955 427 aa12.05□□□□□ -0.48
DDX56-203ENST00000421223 RNASE9P60153 205 aaKnown RBP12.05□□□□□ -0.48
DDX56-203ENST00000421223 SP4Q02446 784 aa12.05□□□□□ -0.48
DDX56-203ENST00000421223 KNOP1Q1ED39 458 aaKnown RBP12.05□□□□□ -0.48
DDX56-203ENST00000421223 CEP55Q53EZ4 464 aa12.05□□□□□ -0.48
DDX56-203ENST00000421223 HYIQ5T013 277 aa12.05□□□□□ -0.48
DDX56-203ENST00000421223 SFMBT2Q5VUG0 894 aa12.05□□□□□ -0.48
DDX56-203ENST00000421223 CC2D1AQ6P1N0 951 aaPredicted RBP12.05□□□□□ -0.48
DDX56-203ENST00000421223 BTNL9Q6UXG8 535 aa12.05□□□□□ -0.48
DDX56-203ENST00000421223 NSMFQ6X4W1 530 aa12.05□□□□□ -0.48
DDX56-203ENST00000421223 CCDC170Q8IYT3 715 aa12.05□□□□□ -0.48
DDX56-203ENST00000421223 CRYGNQ8WXF5 182 aa12.05□□□□□ -0.48
DDX56-203ENST00000421223 SMARCAL1Q9NZC9 954 aa12.05□□□□□ -0.48
DDX56-203ENST00000421223 PIM2Q9P1W9 311 aa12.05□□□□□ -0.48
DDX56-203ENST00000421223 VAV3Q9UKW4 847 aa12.05□□□□□ -0.48
DDX56-203ENST00000421223 NRXN2Q9P2S2 1712 aa12.05□□□□□ -0.48
DDX56-203ENST00000421223 NCK2O43639 380 aa12.05□□□□□ -0.48
DDX56-203ENST00000421223 SLITRK3O94933 977 aa12.05□□□□□ -0.48
DDX56-203ENST00000421223 ASNSP08243 561 aa12.05□□□□□ -0.48
DDX56-203ENST00000421223 EIF2AK2P19525 551 aaKnown RBP12.05□□□□□ -0.48
DDX56-203ENST00000421223 CYP2J2P51589 502 aa12.05□□□□□ -0.48
DDX56-203ENST00000421223 VAV2P52735 878 aa12.05□□□□□ -0.48
DDX56-203ENST00000421223 GABPB1Q06547 395 aaPredicted RBP12.05□□□□□ -0.48
DDX56-203ENST00000421223 TMEM132AQ24JP5 1023 aa12.05□□□□□ -0.48
DDX56-203ENST00000421223 ZCWPW2Q504Y3 356 aa12.05□□□□□ -0.48
DDX56-203ENST00000421223 RINT1Q6NUQ1 792 aa12.05□□□□□ -0.48
DDX56-203ENST00000421223 OTOP1Q7RTM1 612 aa12.05□□□□□ -0.48
DDX56-203ENST00000421223 KCTD10Q9H3F6 313 aa12.05□□□□□ -0.48
DDX56-203ENST00000421223 ADAMTS1Q9UHI8 967 aa12.05□□□□□ -0.48
DDX56-203ENST00000421223 PCDHA2Q9Y5H9 948 aa12.05□□□□□ -0.48
DDX56-203ENST00000421223 CAPN6Q9Y6Q1 641 aa12.05□□□□□ -0.48
DDX56-203ENST00000421223 CCDC43Q96MW1 224 aaKnown RBP12.05□□□□□ -0.48
DDX56-203ENST00000421223 MBOAT7Q96N66 472 aa12.05□□□□□ -0.48
DDX56-203ENST00000421223 WDR11Q9BZH6 1224 aa12.05□□□□□ -0.48
DDX56-203ENST00000421223 FOCADQ5VW36 1801 aa12.04□□□□□ -0.48
DDX56-203ENST00000421223 IGLV3-22A0A075B6J6 115 aa12.04□□□□□ -0.48
DDX56-203ENST00000421223 IPO5O00410 1097 aaKnown RBP12.04□□□□□ -0.48
DDX56-203ENST00000421223 TBX3O15119 743 aa12.04□□□□□ -0.48
DDX56-203ENST00000421223 SASH3O75995 380 aa12.04□□□□□ -0.48
DDX56-203ENST00000421223 COG2Q14746 738 aa12.04□□□□□ -0.48
DDX56-203ENST00000421223 SLC9C1Q4G0N8 1177 aa12.04□□□□□ -0.48
DDX56-203ENST00000421223 COBLL1Q53SF7 1204 aa12.04□□□□□ -0.48
DDX56-203ENST00000421223 PDXDC1Q6P996 788 aa12.04□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms