RNA–Protein interactions for RNA: ENST00000418518.2

LINCMD1-201, Transcript of long intergenic non-protein coding RNA, muscle differentiation 1, humanhuman

TSL 5 BASIC

Gene LINCMD1, Length 462 nt, Biotype lincRNA, Subcellular localisation Cytoplasm .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINCMD1-201ENST00000418518 NACC1Q96RE7 527 aa10.03□□□□□ -0.8
LINCMD1-201ENST00000418518 TAAR1Q96RJ0 339 aa10.03□□□□□ -0.8
LINCMD1-201ENST00000418518 UIMC1Q96RL1 719 aa10.03□□□□□ -0.8
LINCMD1-201ENST00000418518 PDCD2LQ9BRP1 358 aa10.03□□□□□ -0.8
LINCMD1-201ENST00000418518 NOC4LQ9BVI4 516 aaKnown RBP10.03□□□□□ -0.8
LINCMD1-201ENST00000418518 EDEM3Q9BZQ6 932 aa10.03□□□□□ -0.8
LINCMD1-201ENST00000418518 FHDC1Q9C0D6 1143 aaPredicted RBP10.03□□□□□ -0.8
LINCMD1-201ENST00000418518 BHMT2Q9H2M3 363 aa10.03□□□□□ -0.8
LINCMD1-201ENST00000418518 L2HGDHQ9H9P8 463 aa10.03□□□□□ -0.8
LINCMD1-201ENST00000418518 RNF146Q9NTX7 359 aa10.03□□□□□ -0.8
LINCMD1-201ENST00000418518 TBC1D22BQ9NU19 505 aa10.03□□□□□ -0.8
LINCMD1-201ENST00000418518 DBR1Q9UK59 544 aaKnown RBP10.03□□□□□ -0.8
LINCMD1-201ENST00000418518 COL4A3BPQ9Y5P4 624 aa10.03□□□□□ -0.8
LINCMD1-201ENST00000418518 ADGRG1Q9Y653 693 aa10.03□□□□□ -0.8
LINCMD1-201ENST00000418518 SNCAIPQ9Y6H5 919 aa10.03□□□□□ -0.8
LINCMD1-201ENST00000418518 ZHX2Q9Y6X8 837 aa10.03□□□□□ -0.8
LINCMD1-201ENST00000418518 ZNFX1Q9P2E3 1918 aaKnown RBP10.03□□□□□ -0.8
LINCMD1-201ENST00000418518 SOWAHDA6NJG2 315 aa10.02□□□□□ -0.81
LINCMD1-201ENST00000418518 PDXKO00764 312 aa10.02□□□□□ -0.81
LINCMD1-201ENST00000418518 NKRFO15226 690 aaKnown RBP eCLIP10.02□□□□□ -0.81
LINCMD1-201ENST00000418518 KRT18P05783 430 aaKnown RBP10.02□□□□□ -0.81
LINCMD1-201ENST00000418518 CCDC175P0C221 793 aa10.02□□□□□ -0.81
LINCMD1-201ENST00000418518 GUCY2CP25092 1073 aa10.02□□□□□ -0.81
LINCMD1-201ENST00000418518 HOXD13P35453 343 aa10.02□□□□□ -0.81
LINCMD1-201ENST00000418518 ERVK-24P63145 666 aa10.02□□□□□ -0.81
LINCMD1-201ENST00000418518 ZBED6P86452 979 aa10.02□□□□□ -0.81
LINCMD1-201ENST00000418518 ITGB3BPQ13352 177 aaPredicted RBP10.02□□□□□ -0.81
LINCMD1-201ENST00000418518 CTTNQ14247 550 aaKnown RBP10.02□□□□□ -0.81
LINCMD1-201ENST00000418518 COG2Q14746 738 aa10.02□□□□□ -0.81
LINCMD1-201ENST00000418518 LRRC41Q15345 812 aa10.02□□□□□ -0.81
LINCMD1-201ENST00000418518 FKBP15Q5T1M5 1219 aa10.02□□□□□ -0.81
LINCMD1-201ENST00000418518 RNF207Q6ZRF8 634 aa10.02□□□□□ -0.81
LINCMD1-201ENST00000418518 PPP1R3FQ6ZSY5 799 aaPredicted RBP10.02□□□□□ -0.81
LINCMD1-201ENST00000418518 DHX30Q7L2E3 1194 aaKnown RBP eCLIP10.02□□□□□ -0.81
LINCMD1-201ENST00000418518 CPXCR1Q8N123 301 aa10.02□□□□□ -0.81
LINCMD1-201ENST00000418518 OR8K1Q8NGG5 319 aa10.02□□□□□ -0.81
LINCMD1-201ENST00000418518 GPRASP2Q96D09 838 aa10.02□□□□□ -0.81
LINCMD1-201ENST00000418518 WNK4Q96J92 1243 aa10.02□□□□□ -0.81
LINCMD1-201ENST00000418518 FIZ1Q96SL8 496 aa10.02□□□□□ -0.81
LINCMD1-201ENST00000418518 LXNQ9BS40 222 aa10.02□□□□□ -0.81
LINCMD1-201ENST00000418518 NDST4Q9H3R1 872 aa10.02□□□□□ -0.81
LINCMD1-201ENST00000418518 TMOD4Q9NZQ9 345 aa10.02□□□□□ -0.81
LINCMD1-201ENST00000418518 WRAP73Q9P2S5 460 aaPredicted RBP10.02□□□□□ -0.81
LINCMD1-201ENST00000418518 LUC7L2Q9Y383 392 aaKnown RBP10.02□□□□□ -0.81
LINCMD1-201ENST00000418518 CTDP1Q9Y5B0 961 aaPredicted RBP10.02□□□□□ -0.81
LINCMD1-201ENST00000418518 ZC3H4Q9UPT8 1303 aaKnown RBP10.02□□□□□ -0.81
LINCMD1-201ENST00000418518 SPDYE16A6NNV3 312 aaPredicted RBP10.01□□□□□ -0.81
LINCMD1-201ENST00000418518 RSPH10B2B2RC85 870 aa10.01□□□□□ -0.81
LINCMD1-201ENST00000418518 SLC16A3O15427 465 aaKnown RBP10.01□□□□□ -0.81
LINCMD1-201ENST00000418518 MAFGO15525 162 aa10.01□□□□□ -0.81
LINCMD1-201ENST00000418518 TBCAO75347 108 aaKnown RBP10.01□□□□□ -0.81
LINCMD1-201ENST00000418518 STAM2O75886 525 aa10.01□□□□□ -0.81
LINCMD1-201ENST00000418518 P4HBP07237 508 aaKnown RBP10.01□□□□□ -0.81
LINCMD1-201ENST00000418518 RSPH10BP0C881 870 aa10.01□□□□□ -0.81
LINCMD1-201ENST00000418518 MAPTP10636 758 aaKnown RBP10.01□□□□□ -0.81
LINCMD1-201ENST00000418518 CCND2P30279 289 aa10.01□□□□□ -0.81
LINCMD1-201ENST00000418518 CASP5P51878 434 aa10.01□□□□□ -0.81
LINCMD1-201ENST00000418518 MAP3K9P80192 1104 aa10.01□□□□□ -0.81
LINCMD1-201ENST00000418518 CACNB1Q02641 598 aaPredicted RBP10.01□□□□□ -0.81
LINCMD1-201ENST00000418518 PPP2R3AQ06190 1150 aa10.01□□□□□ -0.81
LINCMD1-201ENST00000418518 VGLL4Q14135 290 aa10.01□□□□□ -0.81
LINCMD1-201ENST00000418518 MTF1Q14872 753 aa10.01□□□□□ -0.81
LINCMD1-201ENST00000418518 KNOP1Q1ED39 458 aaKnown RBP10.01□□□□□ -0.81
LINCMD1-201ENST00000418518 PRAMEF18Q5VWM3 479 aa10.01□□□□□ -0.81
LINCMD1-201ENST00000418518 WDR59Q6PJI9 974 aa10.01□□□□□ -0.81
LINCMD1-201ENST00000418518 SAMD1Q6SPF0 538 aaPredicted RBP10.01□□□□□ -0.81
LINCMD1-201ENST00000418518 ZNF662Q6ZS27 426 aa10.01□□□□□ -0.81
LINCMD1-201ENST00000418518 MIER3Q7Z3K6 550 aa10.01□□□□□ -0.81
LINCMD1-201ENST00000418518 VSIG10LQ86VR7 867 aa10.01□□□□□ -0.81
LINCMD1-201ENST00000418518 INPP4AQ96PE3 977 aaPredicted RBP10.01□□□□□ -0.81
LINCMD1-201ENST00000418518 RMDN3Q96TC7 470 aa10.01□□□□□ -0.81
LINCMD1-201ENST00000418518 SENP7Q9BQF6 1050 aa10.01□□□□□ -0.81
LINCMD1-201ENST00000418518 STRA6Q9BX79 667 aa10.01□□□□□ -0.81
LINCMD1-201ENST00000418518 TEX13BQ9BXU2 312 aa10.01□□□□□ -0.81
LINCMD1-201ENST00000418518 TYW1Q9NV66 732 aaKnown RBP10.01□□□□□ -0.81
LINCMD1-201ENST00000418518 FAM184BQ9ULE4 1060 aa10.01□□□□□ -0.81
LINCMD1-201ENST00000418518 RIPK3Q9Y572 518 aa10.01□□□□□ -0.81
LINCMD1-201ENST00000418518 ASTN1O14525 1302 aa10.01□□□□□ -0.81
LINCMD1-201ENST00000418518 NFASCO94856 1347 aa10.01□□□□□ -0.81
LINCMD1-201ENST00000418518 ZMYM2Q9UBW7 1377 aa10.01□□□□□ -0.81
LINCMD1-201ENST00000418518 TRAF5O00463 557 aa10□□□□□ -0.81
LINCMD1-201ENST00000418518 IRF6O14896 467 aa10□□□□□ -0.81
LINCMD1-201ENST00000418518 FANCGO15287 622 aa10□□□□□ -0.81
LINCMD1-201ENST00000418518 CHMP2AO43633 222 aa10□□□□□ -0.81
LINCMD1-201ENST00000418518 PPP1R37O75864 691 aa10□□□□□ -0.81
LINCMD1-201ENST00000418518 DDNO94850 711 aaPredicted RBP10□□□□□ -0.81
LINCMD1-201ENST00000418518 FAM13AO94988 1023 aa10□□□□□ -0.81
LINCMD1-201ENST00000418518 SFNP31947 248 aa10□□□□□ -0.81
LINCMD1-201ENST00000418518 JAK3P52333 1124 aa10□□□□□ -0.81
LINCMD1-201ENST00000418518 KRT76Q01546 638 aa10□□□□□ -0.81
LINCMD1-201ENST00000418518 MAPK7Q13164 816 aa10□□□□□ -0.81
LINCMD1-201ENST00000418518 MTMR1Q13613 665 aa10□□□□□ -0.81
LINCMD1-201ENST00000418518 BAATQ14032 418 aaPredicted RBP10□□□□□ -0.81
LINCMD1-201ENST00000418518 TMEM132BQ14DG7 1078 aa10□□□□□ -0.81
LINCMD1-201ENST00000418518 SNRNP48Q6IEG0 339 aaKnown RBP10□□□□□ -0.81
LINCMD1-201ENST00000418518 LBX2Q6XYB7 198 aa10□□□□□ -0.81
LINCMD1-201ENST00000418518 FRMD5Q7Z6J6 570 aa10□□□□□ -0.81
LINCMD1-201ENST00000418518 TPH2Q8IWU9 490 aa10□□□□□ -0.81
LINCMD1-201ENST00000418518 C4orf19Q8IY42 314 aa10□□□□□ -0.81
LINCMD1-201ENST00000418518 PROCA1Q8NCQ7 364 aaPredicted RBP10□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms