RNA–Protein interactions for RNA: ENST00000417724.1

HLA-DPA1-241, Transcript of major histocompatibility complex, class II, DP alpha 1, humanhuman

Gene HLA-DPA1, Length 305 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPA1-241ENST00000417724 MBLAC1A4D2B0 266 aaPredicted RBP9.05□□□□□ -0.96
HLA-DPA1-241ENST00000417724 RRN3P2A6NIE6 340 aa9.05□□□□□ -0.96
HLA-DPA1-241ENST00000417724 LOC730098B7Z3J9 87 aa9.05□□□□□ -0.96
HLA-DPA1-241ENST00000417724 CYTH3O43739 400 aa9.05□□□□□ -0.96
HLA-DPA1-241ENST00000417724 ST18O60284 1047 aa9.05□□□□□ -0.96
HLA-DPA1-241ENST00000417724 CSPG5O95196 566 aa9.05□□□□□ -0.96
HLA-DPA1-241ENST00000417724 ITGB1P05556 798 aa9.05□□□□□ -0.96
HLA-DPA1-241ENST00000417724 RRP1P56182 461 aaKnown RBP9.05□□□□□ -0.96
HLA-DPA1-241ENST00000417724 MRPS6P82932 125 aaKnown RBP9.05□□□□□ -0.96
HLA-DPA1-241ENST00000417724 ZXDAP98168 799 aa9.05□□□□□ -0.96
HLA-DPA1-241ENST00000417724 MGAT3Q09327 533 aa9.05□□□□□ -0.96
HLA-DPA1-241ENST00000417724 AAMPQ13685 434 aa9.05□□□□□ -0.96
HLA-DPA1-241ENST00000417724 SART3Q15020 963 aaKnown RBP9.05□□□□□ -0.96
HLA-DPA1-241ENST00000417724 GRIK4Q16099 956 aa9.05□□□□□ -0.96
HLA-DPA1-241ENST00000417724 SLC35G1Q2M3R5 365 aa9.05□□□□□ -0.96
HLA-DPA1-241ENST00000417724 IER5LQ5T953 404 aa9.05□□□□□ -0.96
HLA-DPA1-241ENST00000417724 B4GALNT3Q6L9W6 998 aa9.05□□□□□ -0.96
HLA-DPA1-241ENST00000417724 FAM43BQ6ZT52 329 aaPredicted RBP9.05□□□□□ -0.96
HLA-DPA1-241ENST00000417724 CYB5R4Q7L1T6 521 aa9.05□□□□□ -0.96
HLA-DPA1-241ENST00000417724 CATIPQ7Z7H3 387 aa9.05□□□□□ -0.96
HLA-DPA1-241ENST00000417724 CHD1LQ86WJ1 897 aa9.05□□□□□ -0.96
HLA-DPA1-241ENST00000417724 NPAS4Q8IUM7 802 aa9.05□□□□□ -0.96
HLA-DPA1-241ENST00000417724 SMC5Q8IY18 1101 aa9.05□□□□□ -0.96
HLA-DPA1-241ENST00000417724 FBXL6Q8N531 539 aa9.05□□□□□ -0.96
HLA-DPA1-241ENST00000417724 KLHL23Q8NBE8 558 aa9.05□□□□□ -0.96
HLA-DPA1-241ENST00000417724 SMRP1Q8NCR6 262 aa9.05□□□□□ -0.96
HLA-DPA1-241ENST00000417724 PRSS33Q8NF86 280 aa9.05□□□□□ -0.96
HLA-DPA1-241ENST00000417724 MICAL1Q8TDZ2 1067 aa9.05□□□□□ -0.96
HLA-DPA1-241ENST00000417724 TNPO1Q92973 898 aaKnown RBP9.05□□□□□ -0.96
HLA-DPA1-241ENST00000417724 GPRASP2Q96D09 838 aa9.05□□□□□ -0.96
HLA-DPA1-241ENST00000417724 IRF2BPLQ9H1B7 796 aa9.05□□□□□ -0.96
HLA-DPA1-241ENST00000417724 RWDD1Q9H446 243 aaPredicted RBP9.05□□□□□ -0.96
HLA-DPA1-241ENST00000417724 SMARCAD1Q9H4L7 1026 aa9.05□□□□□ -0.96
HLA-DPA1-241ENST00000417724 CLEC1BQ9P126 229 aa9.05□□□□□ -0.96
HLA-DPA1-241ENST00000417724 TELO2Q9Y4R8 837 aa9.05□□□□□ -0.96
HLA-DPA1-241ENST00000417724 CDY2AQ9Y6F7 541 aa9.05□□□□□ -0.96
HLA-DPA1-241ENST00000417724 MRPL42Q9Y6G3 142 aaKnown RBP9.05□□□□□ -0.96
HLA-DPA1-241ENST00000417724 U3KPZ7 1027 aaPredicted RBP9.05□□□□□ -0.96
HLA-DPA1-241ENST00000417724 LOXHD1Q8IVV2 1947 aa9.05□□□□□ -0.96
HLA-DPA1-241ENST00000417724 TRIOO75962 3097 aa9.05□□□□□ -0.96
HLA-DPA1-241ENST00000417724 GSTTP1A0A1W2PQM5 241 aa9.04□□□□□ -0.96
HLA-DPA1-241ENST00000417724 FSD2A1L4K1 749 aa9.04□□□□□ -0.96
HLA-DPA1-241ENST00000417724 M0QZ92 97 aa9.04□□□□□ -0.96
HLA-DPA1-241ENST00000417724 PIK3CDO00329 1044 aa9.04□□□□□ -0.96
HLA-DPA1-241ENST00000417724 MAFGO15525 162 aa9.04□□□□□ -0.96
HLA-DPA1-241ENST00000417724 DNAJB1P25685 340 aa9.04□□□□□ -0.96
HLA-DPA1-241ENST00000417724 MARK3P27448 753 aa9.04□□□□□ -0.96
HLA-DPA1-241ENST00000417724 CD52P31358 61 aa9.04□□□□□ -0.96
HLA-DPA1-241ENST00000417724 NRIP1P48552 1158 aa9.04□□□□□ -0.96
HLA-DPA1-241ENST00000417724 TROAPQ12815 778 aa9.04□□□□□ -0.96
HLA-DPA1-241ENST00000417724 CBX2Q14781 532 aaPredicted RBP9.04□□□□□ -0.96
HLA-DPA1-241ENST00000417724 WTAPQ15007 396 aa9.04□□□□□ -0.96
HLA-DPA1-241ENST00000417724 MARCH8Q5T0T0 291 aa9.04□□□□□ -0.96
HLA-DPA1-241ENST00000417724 USP17L6PQ6QN14 398 aa9.04□□□□□ -0.96
HLA-DPA1-241ENST00000417724 RBM23Q86U06 439 aaKnown RBP9.04□□□□□ -0.96
HLA-DPA1-241ENST00000417724 RTN4RL1Q86UN2 441 aaPredicted RBP9.04□□□□□ -0.96
HLA-DPA1-241ENST00000417724 CRIPAKQ8N1N5 446 aa9.04□□□□□ -0.96
HLA-DPA1-241ENST00000417724 POF1BQ8WVV4 589 aa9.04□□□□□ -0.96
HLA-DPA1-241ENST00000417724 PIBF1Q8WXW3 757 aa9.04□□□□□ -0.96
HLA-DPA1-241ENST00000417724 RRP36Q96EU6 259 aaKnown RBP9.04□□□□□ -0.96
HLA-DPA1-241ENST00000417724 PHOX2BQ99453 314 aa9.04□□□□□ -0.96
HLA-DPA1-241ENST00000417724 PHF7Q9BWX1 381 aaPredicted RBP9.04□□□□□ -0.96
HLA-DPA1-241ENST00000417724 TLE6Q9H808 572 aa9.04□□□□□ -0.96
HLA-DPA1-241ENST00000417724 AGO3Q9H9G7 860 aaKnown RBP9.04□□□□□ -0.96
HLA-DPA1-241ENST00000417724 RNF216Q9NWF9 866 aaPredicted RBP9.04□□□□□ -0.96
HLA-DPA1-241ENST00000417724 LRFN2Q9ULH4 789 aa9.04□□□□□ -0.96
HLA-DPA1-241ENST00000417724 PADI3Q9ULW8 664 aa9.04□□□□□ -0.96
HLA-DPA1-241ENST00000417724 USP15Q9Y4E8 981 aaPredicted RBP9.04□□□□□ -0.96
HLA-DPA1-241ENST00000417724 C5orf42Q9H799 3197 aa9.04□□□□□ -0.96
HLA-DPA1-241ENST00000417724 PTPRZ1P23471 2315 aaPredicted RBP9.03□□□□□ -0.96
HLA-DPA1-241ENST00000417724 WDFY4Q6ZS81 3184 aa9.03□□□□□ -0.96
HLA-DPA1-241ENST00000417724 MEIS2O14770 477 aa9.03□□□□□ -0.96
HLA-DPA1-241ENST00000417724 ATP9AO75110 1047 aa9.03□□□□□ -0.96
HLA-DPA1-241ENST00000417724 PPFIA3O75145 1194 aa9.03□□□□□ -0.96
HLA-DPA1-241ENST00000417724 SCG2P13521 617 aa9.03□□□□□ -0.96
HLA-DPA1-241ENST00000417724 INSRRP14616 1297 aa9.03□□□□□ -0.96
HLA-DPA1-241ENST00000417724 KCNA2P16389 499 aa9.03□□□□□ -0.96
HLA-DPA1-241ENST00000417724 ATF7P17544 494 aaPredicted RBP9.03□□□□□ -0.96
HLA-DPA1-241ENST00000417724 SMARCA1P28370 1054 aa9.03□□□□□ -0.96
HLA-DPA1-241ENST00000417724 KIF5BP33176 963 aa9.03□□□□□ -0.96
HLA-DPA1-241ENST00000417724 IGBP1P78318 339 aa9.03□□□□□ -0.96
HLA-DPA1-241ENST00000417724 NUCB1Q02818 461 aa9.03□□□□□ -0.96
HLA-DPA1-241ENST00000417724 UBE3AQ05086 875 aa9.03□□□□□ -0.96
HLA-DPA1-241ENST00000417724 SIGLEC14Q08ET2 396 aa9.03□□□□□ -0.96
HLA-DPA1-241ENST00000417724 PAN2Q504Q3 1202 aaKnown RBP9.03□□□□□ -0.96
HLA-DPA1-241ENST00000417724 ADGRD2Q7Z7M1 963 aa9.03□□□□□ -0.96
HLA-DPA1-241ENST00000417724 RALYLQ86SE5 291 aaKnown RBP9.03□□□□□ -0.96
HLA-DPA1-241ENST00000417724 RPGRIP1Q96KN7 1286 aa9.03□□□□□ -0.96
HLA-DPA1-241ENST00000417724 MAP3K14Q99558 947 aa9.03□□□□□ -0.96
HLA-DPA1-241ENST00000417724 LZTS2Q9BRK4 669 aa9.03□□□□□ -0.96
HLA-DPA1-241ENST00000417724 FAM49AQ9H0Q0 323 aaPredicted RBP9.03□□□□□ -0.96
HLA-DPA1-241ENST00000417724 AZI2Q9H6S1 392 aa9.03□□□□□ -0.96
HLA-DPA1-241ENST00000417724 PSTPIP2Q9H939 334 aa9.03□□□□□ -0.96
HLA-DPA1-241ENST00000417724 AAASQ9NRG9 546 aa9.03□□□□□ -0.96
HLA-DPA1-241ENST00000417724 SEC63Q9UGP8 760 aaKnown RBP9.03□□□□□ -0.96
HLA-DPA1-241ENST00000417724 PCDHB12Q9Y5F1 795 aa9.03□□□□□ -0.96
HLA-DPA1-241ENST00000417724 CACNA1HO95180 2353 aa9.03□□□□□ -0.96
HLA-DPA1-241ENST00000417724 KIAA1671Q9BY89 1806 aa9.03□□□□□ -0.96
HLA-DPA1-241ENST00000417724 MYO10Q9HD67 2058 aa9.02□□□□□ -0.97
HLA-DPA1-241ENST00000417724 GLP2RO95838 553 aa9.02□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms