RNA–Protein interactions for RNA: ENST00000416742.5

LINC00494-201, long intergenic non-protein coding RNA 494, humanhuman

TSL 1 (best) BASIC

Gene LINC00494, Length 3,544 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00494-201ENST00000416742 ERLIN1O75477 346 aa10.97□□□□□ -0.65
LINC00494-201ENST00000416742 VIL1P09327 827 aaKnown RBP10.97□□□□□ -0.65
LINC00494-201ENST00000416742 KNOP1Q1ED39 458 aaKnown RBP10.97□□□□□ -0.65
LINC00494-201ENST00000416742 SLC9C1Q4G0N8 1177 aa10.97□□□□□ -0.65
LINC00494-201ENST00000416742 DCAF17Q5H9S7 520 aaPredicted RBP10.97□□□□□ -0.65
LINC00494-201ENST00000416742 SUGCTQ9HAC7 445 aa10.97□□□□□ -0.65
LINC00494-201ENST00000416742 ZCCHC17Q9NP64 241 aaKnown RBP10.97□□□□□ -0.65
LINC00494-201ENST00000416742 VAV3Q9UKW4 847 aa10.97□□□□□ -0.65
LINC00494-201ENST00000416742 DDX39AO00148 427 aaKnown RBP10.97□□□□□ -0.65
LINC00494-201ENST00000416742 BUB1O43683 1085 aa10.97□□□□□ -0.65
LINC00494-201ENST00000416742 FAM13AO94988 1023 aa10.97□□□□□ -0.65
LINC00494-201ENST00000416742 TRAF1Q13077 416 aa10.97□□□□□ -0.65
LINC00494-201ENST00000416742 PAPD7Q5XG87 772 aaKnown RBP10.97□□□□□ -0.65
LINC00494-201ENST00000416742 MYCT1Q8N699 235 aa10.97□□□□□ -0.65
LINC00494-201ENST00000416742 HINFPQ9BQA5 517 aa10.97□□□□□ -0.65
LINC00494-201ENST00000416742 FUT8Q9BYC5 575 aa10.97□□□□□ -0.65
LINC00494-201ENST00000416742 VCPKMTQ9H867 229 aa10.97□□□□□ -0.65
LINC00494-201ENST00000416742 ARMCX3Q9UH62 379 aaPredicted RBP10.97□□□□□ -0.65
LINC00494-201ENST00000416742 MRPL11Q9Y3B7 192 aaKnown RBP10.97□□□□□ -0.65
LINC00494-201ENST00000416742 CAPN6Q9Y6Q1 641 aa10.97□□□□□ -0.65
LINC00494-201ENST00000416742 ATP8B1O43520 1251 aa10.96□□□□□ -0.65
LINC00494-201ENST00000416742 GAS7O60861 476 aa10.96□□□□□ -0.65
LINC00494-201ENST00000416742 KCNA1Q09470 495 aa10.96□□□□□ -0.65
LINC00494-201ENST00000416742 MSANTD4Q8NCY6 345 aa10.96□□□□□ -0.65
LINC00494-201ENST00000416742 CEP72Q9P209 647 aa10.96□□□□□ -0.65
LINC00494-201ENST00000416742 PCDHB13Q9Y5F0 798 aa10.96□□□□□ -0.65
LINC00494-201ENST00000416742 IGLV3-22A0A075B6J6 115 aa10.96□□□□□ -0.65
LINC00494-201ENST00000416742 SLC26A4O43511 780 aa10.96□□□□□ -0.65
LINC00494-201ENST00000416742 NOL4O94818 638 aa10.96□□□□□ -0.65
LINC00494-201ENST00000416742 EYA4O95677 639 aa10.96□□□□□ -0.65
LINC00494-201ENST00000416742 CYP3A4P08684 503 aa10.96□□□□□ -0.65
LINC00494-201ENST00000416742 ACTN1P12814 892 aa10.96□□□□□ -0.65
LINC00494-201ENST00000416742 TUBB4BP68371 445 aa10.96□□□□□ -0.65
LINC00494-201ENST00000416742 SMC1AQ14683 1233 aaKnown RBP10.96□□□□□ -0.65
LINC00494-201ENST00000416742 TERF2Q15554 542 aa10.96□□□□□ -0.65
LINC00494-201ENST00000416742 NBPF9Q3BBW0 867 aa10.96□□□□□ -0.65
LINC00494-201ENST00000416742 SPDYE2Q495Y8 402 aa10.96□□□□□ -0.65
LINC00494-201ENST00000416742 ZNF662Q6ZS27 426 aa10.96□□□□□ -0.65
LINC00494-201ENST00000416742 LDHDQ86WU2 507 aa10.96□□□□□ -0.65
LINC00494-201ENST00000416742 NIM1KQ8IY84 436 aa10.96□□□□□ -0.65
LINC00494-201ENST00000416742 CPXCR1Q8N123 301 aa10.96□□□□□ -0.65
LINC00494-201ENST00000416742 CAMKK2Q96RR4 588 aa10.96□□□□□ -0.65
LINC00494-201ENST00000416742 GMLQ99445 158 aa10.96□□□□□ -0.65
LINC00494-201ENST00000416742 IKZF4Q9H2S9 585 aa10.96□□□□□ -0.65
LINC00494-201ENST00000416742 FRMD3A2A2Y4 597 aa10.96□□□□□ -0.66
LINC00494-201ENST00000416742 CALUO43852 315 aaPredicted RBP10.96□□□□□ -0.66
LINC00494-201ENST00000416742 ARP10275 920 aa10.96□□□□□ -0.66
LINC00494-201ENST00000416742 NMT1P30419 496 aaKnown RBP10.96□□□□□ -0.66
LINC00494-201ENST00000416742 DNA2P51530 1060 aa10.96□□□□□ -0.66
LINC00494-201ENST00000416742 RINT1Q6NUQ1 792 aa10.96□□□□□ -0.66
LINC00494-201ENST00000416742 OTOP1Q7RTM1 612 aa10.96□□□□□ -0.66
LINC00494-201ENST00000416742 TRMT1LQ7Z2T5 733 aaKnown RBP10.96□□□□□ -0.66
LINC00494-201ENST00000416742 FAM133AQ8N9E0 248 aa10.96□□□□□ -0.66
LINC00494-201ENST00000416742 TRIM58Q8NG06 486 aa10.96□□□□□ -0.66
LINC00494-201ENST00000416742 POLR3CQ9BUI4 534 aaPredicted RBP10.96□□□□□ -0.66
LINC00494-201ENST00000416742 SH2D4AQ9H788 454 aa10.96□□□□□ -0.66
LINC00494-201ENST00000416742 FAM184BQ9ULE4 1060 aa10.96□□□□□ -0.66
LINC00494-201ENST00000416742 STK24Q9Y6E0 443 aa10.96□□□□□ -0.66
LINC00494-201ENST00000416742 CNTNAP1P78357 1384 aa10.95□□□□□ -0.66
LINC00494-201ENST00000416742 PIK3CDO00329 1044 aa10.95□□□□□ -0.66
LINC00494-201ENST00000416742 ZMYND10O75800 440 aa10.95□□□□□ -0.66
LINC00494-201ENST00000416742 SLITRK3O94933 977 aa10.95□□□□□ -0.66
LINC00494-201ENST00000416742 SLC9A1P19634 815 aa10.95□□□□□ -0.66
LINC00494-201ENST00000416742 OAS2P29728 719 aaKnown RBP10.95□□□□□ -0.66
LINC00494-201ENST00000416742 CXCR5P32302 372 aa10.95□□□□□ -0.66
LINC00494-201ENST00000416742 MATR3P43243 847 aaKnown RBP eCLIP10.95□□□□□ -0.66
LINC00494-201ENST00000416742 EDRF1Q3B7T1 1238 aa10.95□□□□□ -0.66
LINC00494-201ENST00000416742 FOXR2Q6PJQ5 311 aa10.95□□□□□ -0.66
LINC00494-201ENST00000416742 PPP4R3CPQ6ZMV5 832 aa10.95□□□□□ -0.66
LINC00494-201ENST00000416742 KSR1Q8IVT5 923 aa10.95□□□□□ -0.66
LINC00494-201ENST00000416742 AGBL1Q96MI9 1066 aa10.95□□□□□ -0.66
LINC00494-201ENST00000416742 ZNF577Q9BSK1 485 aa10.95□□□□□ -0.66
LINC00494-201ENST00000416742 EDEM3Q9BZQ6 932 aa10.95□□□□□ -0.66
LINC00494-201ENST00000416742 MYH10P35580 1976 aa10.95□□□□□ -0.66
LINC00494-201ENST00000416742 TLR2O60603 784 aa10.95□□□□□ -0.66
LINC00494-201ENST00000416742 POLD1P28340 1107 aa10.95□□□□□ -0.66
LINC00494-201ENST00000416742 HOXD13P35453 343 aa10.95□□□□□ -0.66
LINC00494-201ENST00000416742 CAP2P40123 477 aa10.95□□□□□ -0.66
LINC00494-201ENST00000416742 CASP4P49662 377 aa10.95□□□□□ -0.66
LINC00494-201ENST00000416742 CKAP4Q07065 602 aaKnown RBP10.95□□□□□ -0.66
LINC00494-201ENST00000416742 KLHL30Q0D2K2 578 aa10.95□□□□□ -0.66
LINC00494-201ENST00000416742 CEP55Q53EZ4 464 aa10.95□□□□□ -0.66
LINC00494-201ENST00000416742 BEND6Q5SZJ8 279 aaPredicted RBP10.95□□□□□ -0.66
LINC00494-201ENST00000416742 SPAG5Q96R06 1193 aa10.95□□□□□ -0.66
LINC00494-201ENST00000416742 EHMT1Q9H9B1 1298 aa10.95□□□□□ -0.66
LINC00494-201ENST00000416742 RAB21Q9UL25 225 aa10.95□□□□□ -0.66
LINC00494-201ENST00000416742 SHTN1A0MZ66 631 aa10.95□□□□□ -0.66
LINC00494-201ENST00000416742 PDE2AO00408 941 aaPredicted RBP10.95□□□□□ -0.66
LINC00494-201ENST00000416742 NCK2O43639 380 aa10.95□□□□□ -0.66
LINC00494-201ENST00000416742 SERPING1P05155 500 aa10.95□□□□□ -0.66
LINC00494-201ENST00000416742 PLS1Q14651 629 aa10.95□□□□□ -0.66
LINC00494-201ENST00000416742 ZC2HC1CQ53FD0 456 aaPredicted RBP10.95□□□□□ -0.66
LINC00494-201ENST00000416742 HGSNATQ68CP4 663 aa10.95□□□□□ -0.66
LINC00494-201ENST00000416742 MAEAQ7L5Y9 396 aa10.95□□□□□ -0.66
LINC00494-201ENST00000416742 ALS2CR12Q96Q35 445 aa10.95□□□□□ -0.66
LINC00494-201ENST00000416742 ZNF341Q9BYN7 854 aa10.95□□□□□ -0.66
LINC00494-201ENST00000416742 HOMER2Q9NSB8 354 aa10.95□□□□□ -0.66
LINC00494-201ENST00000416742 ADAMTS1Q9UHI8 967 aa10.95□□□□□ -0.66
LINC00494-201ENST00000416742 ZNRF3Q9ULT6 936 aa10.95□□□□□ -0.66
LINC00494-201ENST00000416742 PSMD10O75832 226 aa10.94□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 9 ms