RNA–Protein interactions for RNA: ENST00000416728.3

PAF1-202, Transcript of PAF1 homolog, Paf1/RNA polymerase II complex component, humanhuman

TSL 2

Gene PAF1, Length 1,383 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAF1-202ENST00000416728 TNPO1Q92973 898 aaKnown RBP16.5■□□□□ 0.23
PAF1-202ENST00000416728 TCEANC2Q96MN5 208 aa16.5■□□□□ 0.23
PAF1-202ENST00000416728 TRPC6Q9Y210 931 aa16.5■□□□□ 0.23
PAF1-202ENST00000416728 CDY2AQ9Y6F7 541 aa16.5■□□□□ 0.23
PAF1-202ENST00000416728 COL4A6Q14031 1691 aa16.5■□□□□ 0.23
PAF1-202ENST00000416728 DOCK5Q9H7D0 1870 aa16.5■□□□□ 0.23
PAF1-202ENST00000416728 NFASCO94856 1347 aa16.49■□□□□ 0.23
PAF1-202ENST00000416728 hCG_1984214I3L0E3 225 aa16.49■□□□□ 0.23
PAF1-202ENST00000416728 INSRRP14616 1297 aa16.49■□□□□ 0.23
PAF1-202ENST00000416728 MRPS6P82932 125 aaKnown RBP16.49■□□□□ 0.23
PAF1-202ENST00000416728 FUT2Q10981 343 aa16.49■□□□□ 0.23
PAF1-202ENST00000416728 FBXO47Q5MNV8 452 aa16.49■□□□□ 0.23
PAF1-202ENST00000416728 TYW1BQ6NUM6 668 aa16.49■□□□□ 0.23
PAF1-202ENST00000416728 TSHZ1Q6ZSZ6 1077 aa16.49■□□□□ 0.23
PAF1-202ENST00000416728 ZNF713Q8N859 430 aaPredicted RBP16.49■□□□□ 0.23
PAF1-202ENST00000416728 BANK1Q8NDB2 785 aa16.49■□□□□ 0.23
PAF1-202ENST00000416728 CYP2W1Q8TAV3 490 aa16.49■□□□□ 0.23
PAF1-202ENST00000416728 PGBD1Q96JS3 809 aa16.49■□□□□ 0.23
PAF1-202ENST00000416728 PCYT2Q99447 389 aa16.49■□□□□ 0.23
PAF1-202ENST00000416728 FAM49AQ9H0Q0 323 aaPredicted RBP16.49■□□□□ 0.23
PAF1-202ENST00000416728 RAPGEFL1Q9UHV5 662 aa16.49■□□□□ 0.23
PAF1-202ENST00000416728 BRPF3Q9ULD4 1205 aa16.49■□□□□ 0.23
PAF1-202ENST00000416728 V9GY48 417 aaPredicted RBP16.49■□□□□ 0.23
PAF1-202ENST00000416728 ADGRA3Q8IWK6 1321 aa16.48■□□□□ 0.23
PAF1-202ENST00000416728 GOLGA8AA7E2F4 631 aa16.48■□□□□ 0.23
PAF1-202ENST00000416728 GOLGA8BA8MQT2 603 aa16.48■□□□□ 0.23
PAF1-202ENST00000416728 M0QZ92 97 aa16.48■□□□□ 0.23
PAF1-202ENST00000416728 ENPP3O14638 875 aa16.48■□□□□ 0.23
PAF1-202ENST00000416728 CTNNB1P35222 781 aa16.48■□□□□ 0.23
PAF1-202ENST00000416728 ACTR2P61160 394 aa16.48■□□□□ 0.23
PAF1-202ENST00000416728 EXOSC10Q01780 885 aaKnown RBP16.48■□□□□ 0.23
PAF1-202ENST00000416728 CEP55Q53EZ4 464 aa16.48■□□□□ 0.23
PAF1-202ENST00000416728 IER5Q5VY09 327 aa16.48■□□□□ 0.23
PAF1-202ENST00000416728 CENPQQ7L2Z9 268 aaPredicted RBP16.48■□□□□ 0.23
PAF1-202ENST00000416728 SKAP1Q86WV1 359 aa16.48■□□□□ 0.23
PAF1-202ENST00000416728 ZBTB10Q96DT7 871 aa16.48■□□□□ 0.23
PAF1-202ENST00000416728 ANO3Q9BYT9 981 aa16.48■□□□□ 0.23
PAF1-202ENST00000416728 GLT8D2Q9H1C3 349 aa16.48■□□□□ 0.23
PAF1-202ENST00000416728 EPHX3Q9H6B9 360 aa16.48■□□□□ 0.23
PAF1-202ENST00000416728 RWDD3Q9Y3V2 267 aa16.48■□□□□ 0.23
PAF1-202ENST00000416728 KLF18A0A0U1RQI7 1052 aa16.47■□□□□ 0.23
PAF1-202ENST00000416728 SMCO2A6NFE2 343 aa16.47■□□□□ 0.23
PAF1-202ENST00000416728 STXBP3O00186 592 aa16.47■□□□□ 0.23
PAF1-202ENST00000416728 ARP10275 920 aa16.47■□□□□ 0.23
PAF1-202ENST00000416728 STAT5BP51692 787 aa16.47■□□□□ 0.23
PAF1-202ENST00000416728 AP3B2Q13367 1082 aa16.47■□□□□ 0.23
PAF1-202ENST00000416728 KRT32Q14532 448 aa16.47■□□□□ 0.23
PAF1-202ENST00000416728 ADCK5Q3MIX3 580 aa16.47■□□□□ 0.23
PAF1-202ENST00000416728 TSGA10IPQ3SY00 556 aa16.47■□□□□ 0.23
PAF1-202ENST00000416728 TCEAL5Q5H9L2 206 aa16.47■□□□□ 0.23
PAF1-202ENST00000416728 PLPPR4Q7Z2D5 763 aa16.47■□□□□ 0.23
PAF1-202ENST00000416728 RASEFQ8IZ41 740 aa16.47■□□□□ 0.23
PAF1-202ENST00000416728 GADD45GIP1Q8TAE8 222 aaPredicted RBP16.47■□□□□ 0.23
PAF1-202ENST00000416728 C11orf84Q9BUA3 381 aaPredicted RBP16.47■□□□□ 0.23
PAF1-202ENST00000416728 NSUN3Q9H649 340 aaKnown RBP16.47■□□□□ 0.23
PAF1-202ENST00000416728 AGO4Q9HCK5 861 aaKnown RBP16.47■□□□□ 0.23
PAF1-202ENST00000416728 BARHL2Q9NY43 387 aa16.47■□□□□ 0.23
PAF1-202ENST00000416728 BDP1A6H8Y1 2624 aa16.47■□□□□ 0.23
PAF1-202ENST00000416728 C5orf67F2Z3F1 127 aa16.46■□□□□ 0.23
PAF1-202ENST00000416728 RB1P06400 928 aa16.46■□□□□ 0.23
PAF1-202ENST00000416728 CD52P31358 61 aa16.46■□□□□ 0.23
PAF1-202ENST00000416728 ZNF76P36508 570 aa16.46■□□□□ 0.23
PAF1-202ENST00000416728 BMPR1AP36894 532 aa16.46■□□□□ 0.23
PAF1-202ENST00000416728 SREBF1P36956 1147 aa16.46■□□□□ 0.23
PAF1-202ENST00000416728 ITGB3BPQ13352 177 aaPredicted RBP16.46■□□□□ 0.23
PAF1-202ENST00000416728 BTG3Q14201 252 aaPredicted RBP16.46■□□□□ 0.23
PAF1-202ENST00000416728 PLCB4Q15147 1175 aa16.46■□□□□ 0.23
PAF1-202ENST00000416728 PTCRAQ6ISU1 281 aaPredicted RBP16.46■□□□□ 0.23
PAF1-202ENST00000416728 TRAPPC12Q8WVT3 735 aa16.46■□□□□ 0.23
PAF1-202ENST00000416728 AGO3Q9H9G7 860 aaKnown RBP16.46■□□□□ 0.23
PAF1-202ENST00000416728 RC3H2Q9HBD1 1191 aaKnown RBP16.46■□□□□ 0.23
PAF1-202ENST00000416728 NAP1L2Q9ULW6 460 aaPredicted RBP16.46■□□□□ 0.23
PAF1-202ENST00000416728 TRPV2Q9Y5S1 764 aa16.46■□□□□ 0.23
PAF1-202ENST00000416728 SQORQ9Y6N5 450 aa16.46■□□□□ 0.23
PAF1-202ENST00000416728 BRWD1Q9NSI6 2320 aa16.45■□□□□ 0.22
PAF1-202ENST00000416728 POTEB3A0JP26 581 aa16.45■□□□□ 0.22
PAF1-202ENST00000416728 H3BQ06 376 aaPredicted RBP16.45■□□□□ 0.22
PAF1-202ENST00000416728 MEIS1O00470 390 aa16.45■□□□□ 0.22
PAF1-202ENST00000416728 CDC45O75419 566 aa16.45■□□□□ 0.22
PAF1-202ENST00000416728 HMGB1P09429 215 aaKnown RBP16.45■□□□□ 0.22
PAF1-202ENST00000416728 SLC26A2P50443 739 aa16.45■□□□□ 0.22
PAF1-202ENST00000416728 RCAN1P53805 252 aa16.45■□□□□ 0.22
PAF1-202ENST00000416728 FGD1P98174 961 aa16.45■□□□□ 0.22
PAF1-202ENST00000416728 TMEM62Q0P6H9 643 aa16.45■□□□□ 0.22
PAF1-202ENST00000416728 PUS10Q3MIT2 529 aaKnown RBP16.45■□□□□ 0.22
PAF1-202ENST00000416728 POTEBQ6S5H4 581 aa16.45■□□□□ 0.22
PAF1-202ENST00000416728 EP400NLQ6ZTU2 488 aa16.45■□□□□ 0.22
PAF1-202ENST00000416728 FAM178BQ8IXR5 827 aa16.45■□□□□ 0.22
PAF1-202ENST00000416728 NEK9Q8TD19 979 aa16.45■□□□□ 0.22
PAF1-202ENST00000416728 PABPC5Q96DU9 382 aaKnown RBP16.45■□□□□ 0.22
PAF1-202ENST00000416728 FTHL17Q9BXU8 183 aa16.45■□□□□ 0.22
PAF1-202ENST00000416728 CD320Q9NPF0 282 aa16.45■□□□□ 0.22
PAF1-202ENST00000416728 FAM217BQ9NTX9 383 aaPredicted RBP16.45■□□□□ 0.22
PAF1-202ENST00000416728 TMEM260Q9NX78 707 aa16.45■□□□□ 0.22
PAF1-202ENST00000416728 PCDHA2Q9Y5H9 948 aa16.45■□□□□ 0.22
PAF1-202ENST00000416728 DGKIO75912 1065 aa16.44■□□□□ 0.22
PAF1-202ENST00000416728 ATG7O95352 703 aa16.44■□□□□ 0.22
PAF1-202ENST00000416728 LINC00271P0C7V0 271 aa16.44■□□□□ 0.22
PAF1-202ENST00000416728 IL9P15248 144 aa16.44■□□□□ 0.22
PAF1-202ENST00000416728 CDC27P30260 824 aa16.44■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms