RNA–Protein interactions for RNA: ENST00000416538.5

UBXN4-203, Transcript of UBX domain protein 4, humanhuman

TSL 5

Gene UBXN4, Length 1,255 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN4-203ENST00000416538 NCOR1O75376 2440 aa17.25■□□□□ 0.35
UBXN4-203ENST00000416538 ESYT2A0FGR8 921 aa17.25■□□□□ 0.35
UBXN4-203ENST00000416538 MBLAC1A4D2B0 266 aaPredicted RBP17.25■□□□□ 0.35
UBXN4-203ENST00000416538 EDIL3O43854 480 aa17.25■□□□□ 0.35
UBXN4-203ENST00000416538 LPXNO60711 386 aa17.25■□□□□ 0.35
UBXN4-203ENST00000416538 CCNE2O96020 404 aa17.25■□□□□ 0.35
UBXN4-203ENST00000416538 EVCP57679 992 aa17.25■□□□□ 0.35
UBXN4-203ENST00000416538 MGAT3Q09327 533 aa17.25■□□□□ 0.35
UBXN4-203ENST00000416538 GRIK4Q16099 956 aa17.25■□□□□ 0.35
UBXN4-203ENST00000416538 CEP55Q53EZ4 464 aa17.25■□□□□ 0.35
UBXN4-203ENST00000416538 FAM117BQ6P1L5 589 aa17.25■□□□□ 0.35
UBXN4-203ENST00000416538 ARNTL2Q8WYA1 636 aa17.25■□□□□ 0.35
UBXN4-203ENST00000416538 UIMC1Q96RL1 719 aa17.25■□□□□ 0.35
UBXN4-203ENST00000416538 ZMYND12Q9H0C1 365 aa17.25■□□□□ 0.35
UBXN4-203ENST00000416538 EHMT1Q9H9B1 1298 aa17.25■□□□□ 0.35
UBXN4-203ENST00000416538 SLC9A2Q9UBY0 812 aa17.25■□□□□ 0.35
UBXN4-203ENST00000416538 NRCAMQ92823 1304 aa17.24■□□□□ 0.35
UBXN4-203ENST00000416538 LOC101059915A0A1B0GWI6 518 aaPredicted RBP17.24■□□□□ 0.35
UBXN4-203ENST00000416538 MEIS1O00470 390 aa17.24■□□□□ 0.35
UBXN4-203ENST00000416538 PRPF3O43395 683 aaKnown RBP17.24■□□□□ 0.35
UBXN4-203ENST00000416538 CAND2O75155 1236 aa17.24■□□□□ 0.35
UBXN4-203ENST00000416538 FOSP01100 380 aaPredicted RBP17.24■□□□□ 0.35
UBXN4-203ENST00000416538 CHRNA1P02708 482 aa17.24■□□□□ 0.35
UBXN4-203ENST00000416538 PDIA3P30101 505 aaKnown RBP17.24■□□□□ 0.35
UBXN4-203ENST00000416538 ACTR2P61160 394 aa17.24■□□□□ 0.35
UBXN4-203ENST00000416538 CCT2P78371 535 aaKnown RBP17.24■□□□□ 0.35
UBXN4-203ENST00000416538 FAM26DQ5JW98 314 aa17.24■□□□□ 0.35
UBXN4-203ENST00000416538 TEX2Q8IWB9 1127 aa17.24■□□□□ 0.35
UBXN4-203ENST00000416538 TRAPPC12Q8WVT3 735 aa17.24■□□□□ 0.35
UBXN4-203ENST00000416538 LARP6Q9BRS8 491 aaKnown RBP17.24■□□□□ 0.35
UBXN4-203ENST00000416538 UPF3BQ9BZI7 483 aaKnown RBP17.24■□□□□ 0.35
UBXN4-203ENST00000416538 ZSWIM6Q9HCJ5 1215 aa17.24■□□□□ 0.35
UBXN4-203ENST00000416538 ERAP1Q9NZ08 941 aa17.24■□□□□ 0.35
UBXN4-203ENST00000416538 TUBE1Q9UJT0 475 aa17.24■□□□□ 0.35
UBXN4-203ENST00000416538 MTCH2Q9Y6C9 303 aa17.24■□□□□ 0.35
UBXN4-203ENST00000416538 MYO7AQ13402 2215 aa17.24■□□□□ 0.35
UBXN4-203ENST00000416538 DDX39AO00148 427 aaKnown RBP17.23■□□□□ 0.35
UBXN4-203ENST00000416538 MAFGO15525 162 aa17.23■□□□□ 0.35
UBXN4-203ENST00000416538 DHX15O43143 795 aaKnown RBP17.23■□□□□ 0.35
UBXN4-203ENST00000416538 IKBKEQ14164 716 aa17.23■□□□□ 0.35
UBXN4-203ENST00000416538 RUFY3Q7L099 469 aa17.23■□□□□ 0.35
UBXN4-203ENST00000416538 MICALL1Q8N3F8 863 aa17.23■□□□□ 0.35
UBXN4-203ENST00000416538 GDPD5Q8WTR4 605 aa17.23■□□□□ 0.35
UBXN4-203ENST00000416538 GLG1Q92896 1179 aa17.23■□□□□ 0.35
UBXN4-203ENST00000416538 SMARCAD1Q9H4L7 1026 aa17.23■□□□□ 0.35
UBXN4-203ENST00000416538 CCDC196A0A1B0GTZ2 297 aa17.22■□□□□ 0.35
UBXN4-203ENST00000416538 LINC01553A4QN01 128 aa17.22■□□□□ 0.35
UBXN4-203ENST00000416538 GNAT1P11488 350 aa17.22■□□□□ 0.35
UBXN4-203ENST00000416538 INSRRP14616 1297 aa17.22■□□□□ 0.35
UBXN4-203ENST00000416538 IFNAR1P17181 557 aa17.22■□□□□ 0.35
UBXN4-203ENST00000416538 IGBP1P78318 339 aa17.22■□□□□ 0.35
UBXN4-203ENST00000416538 GRB10Q13322 594 aa17.22■□□□□ 0.35
UBXN4-203ENST00000416538 PLCB4Q15147 1175 aa17.22■□□□□ 0.35
UBXN4-203ENST00000416538 RPAINQ86UA6 219 aa17.22■□□□□ 0.35
UBXN4-203ENST00000416538 CCDC60Q8IWA6 550 aaPredicted RBP17.22■□□□□ 0.35
UBXN4-203ENST00000416538 MYOCDQ8IZQ8 938 aa17.22■□□□□ 0.35
UBXN4-203ENST00000416538 REXO1Q8N1G1 1221 aaKnown RBP17.22■□□□□ 0.35
UBXN4-203ENST00000416538 SLC26A6Q9BXS9 759 aa17.22■□□□□ 0.35
UBXN4-203ENST00000416538 RNF26Q9BY78 433 aaPredicted RBP17.22■□□□□ 0.35
UBXN4-203ENST00000416538 VPS54Q9P1Q0 977 aa17.22■□□□□ 0.35
UBXN4-203ENST00000416538 IGKV6D-21A0A0A0MT36 114 aa17.21■□□□□ 0.35
UBXN4-203ENST00000416538 KIF28PB7ZC32 967 aa17.21■□□□□ 0.35
UBXN4-203ENST00000416538 EFCAB14O75071 495 aa17.21■□□□□ 0.35
UBXN4-203ENST00000416538 ATG7O95352 703 aa17.21■□□□□ 0.35
UBXN4-203ENST00000416538 CYP3A4P08684 503 aa17.21■□□□□ 0.35
UBXN4-203ENST00000416538 GHRP10912 638 aa17.21■□□□□ 0.35
UBXN4-203ENST00000416538 POU3F3P20264 500 aaPredicted RBP17.21■□□□□ 0.35
UBXN4-203ENST00000416538 PSMA5P28066 241 aa17.21■□□□□ 0.35
UBXN4-203ENST00000416538 HTRA4P83105 476 aaPredicted RBP17.21■□□□□ 0.35
UBXN4-203ENST00000416538 LPIN1Q14693 890 aa17.21■□□□□ 0.35
UBXN4-203ENST00000416538 NIPA1Q7RTP0 329 aa17.21■□□□□ 0.35
UBXN4-203ENST00000416538 PLA2G4DQ86XP0 818 aa17.21■□□□□ 0.35
UBXN4-203ENST00000416538 DNAJB3Q8WWF6 145 aa17.21■□□□□ 0.35
UBXN4-203ENST00000416538 LENG9Q96B70 501 aa17.21■□□□□ 0.35
UBXN4-203ENST00000416538 SDF4Q9BRK5 362 aa17.21■□□□□ 0.35
UBXN4-203ENST00000416538 ZBED2Q9BTP6 218 aa17.21■□□□□ 0.35
UBXN4-203ENST00000416538 THEGQ9P2T0 379 aa17.21■□□□□ 0.35
UBXN4-203ENST00000416538 MTUS1Q9ULD2 1270 aa17.21■□□□□ 0.35
UBXN4-203ENST00000416538 EPB41L2O43491 1005 aaKnown RBP17.2■□□□□ 0.34
UBXN4-203ENST00000416538 DTNBO60941 627 aa17.2■□□□□ 0.34
UBXN4-203ENST00000416538 NEFLP07196 543 aa17.2■□□□□ 0.34
UBXN4-203ENST00000416538 FXR2P51116 673 aaKnown RBP eCLIP17.2■□□□□ 0.34
UBXN4-203ENST00000416538 TAF2Q6P1X5 1199 aa17.2■□□□□ 0.34
UBXN4-203ENST00000416538 SP7Q8TDD2 431 aaPredicted RBP17.2■□□□□ 0.34
UBXN4-203ENST00000416538 LINC01599Q8WXQ3 324 aa17.2■□□□□ 0.34
UBXN4-203ENST00000416538 SEPT8Q92599 483 aa17.2■□□□□ 0.34
UBXN4-203ENST00000416538 AIFM3Q96NN9 605 aa17.2■□□□□ 0.34
UBXN4-203ENST00000416538 RAD9AQ99638 391 aa17.2■□□□□ 0.34
UBXN4-203ENST00000416538 IFIH1Q9BYX4 1025 aaKnown RBP17.2■□□□□ 0.34
UBXN4-203ENST00000416538 GLT8D2Q9H1C3 349 aa17.2■□□□□ 0.34
UBXN4-203ENST00000416538 CDY2AQ9Y6F7 541 aa17.2■□□□□ 0.34
UBXN4-203ENST00000416538 MUC3AQ02505 3323 aa17.2■□□□□ 0.34
UBXN4-203ENST00000416538 FNDC1Q4ZHG4 1894 aaPredicted RBP17.19■□□□□ 0.34
UBXN4-203ENST00000416538 ERVK-21P61565 698 aa17.19■□□□□ 0.34
UBXN4-203ENST00000416538 NPY5RQ15761 445 aa17.19■□□□□ 0.34
UBXN4-203ENST00000416538 FBXO47Q5MNV8 452 aa17.19■□□□□ 0.34
UBXN4-203ENST00000416538 ABHD15Q6UXT9 468 aa17.19■□□□□ 0.34
UBXN4-203ENST00000416538 C17orf80Q9BSJ5 609 aa17.19■□□□□ 0.34
UBXN4-203ENST00000416538 TM6SF1Q9BZW5 370 aa17.19■□□□□ 0.34
UBXN4-203ENST00000416538 FAM49AQ9H0Q0 323 aaPredicted RBP17.19■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms