RNA–Protein interactions for RNA: ENST00000415361.6

CTNND1-206, Transcript of catenin delta 1, humanhuman

TSL 1 (best) BASIC

Gene CTNND1, Length 5,832 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-206ENST00000415361 USP28Q96RU2 1077 aa9.16□□□□□ -0.94
CTNND1-206ENST00000415361 RASSF4Q9H2L5 321 aa9.16□□□□□ -0.94
CTNND1-206ENST00000415361 KIF9Q9HAQ2 790 aa9.16□□□□□ -0.94
CTNND1-206ENST00000415361 DCP1AQ9NPI6 582 aaPredicted RBP9.16□□□□□ -0.94
CTNND1-206ENST00000415361 POLR3EQ9NVU0 708 aa9.16□□□□□ -0.94
CTNND1-206ENST00000415361 HOXD10P28358 340 aa9.16□□□□□ -0.94
CTNND1-206ENST00000415361 GABPB1Q06547 395 aaPredicted RBP9.16□□□□□ -0.94
CTNND1-206ENST00000415361 DBN1Q16643 649 aa9.16□□□□□ -0.94
CTNND1-206ENST00000415361 MAN2A1Q16706 1144 aa9.16□□□□□ -0.94
CTNND1-206ENST00000415361 ZNF658Q5TYW1 1059 aaPredicted RBP9.16□□□□□ -0.94
CTNND1-206ENST00000415361 RSBN1LQ6PCB5 846 aaPredicted RBP9.16□□□□□ -0.94
CTNND1-206ENST00000415361 SAMD7Q7Z3H4 446 aa9.16□□□□□ -0.94
CTNND1-206ENST00000415361 P2RX5Q93086 422 aa9.16□□□□□ -0.94
CTNND1-206ENST00000415361 HDAC11Q96DB2 347 aa9.16□□□□□ -0.94
CTNND1-206ENST00000415361 REREQ9P2R6 1566 aa9.16□□□□□ -0.94
CTNND1-206ENST00000415361 USP17L10C9JJH3 530 aa9.15□□□□□ -0.94
CTNND1-206ENST00000415361 MCF2LO15068 1137 aa9.15□□□□□ -0.94
CTNND1-206ENST00000415361 NR2F2P24468 414 aa9.15□□□□□ -0.94
CTNND1-206ENST00000415361 PDIA6Q15084 440 aa9.15□□□□□ -0.94
CTNND1-206ENST00000415361 UBN2Q6ZU65 1347 aa9.15□□□□□ -0.94
CTNND1-206ENST00000415361 SIX6OS1Q8N1H7 587 aa9.15□□□□□ -0.94
CTNND1-206ENST00000415361 LRRC4Q9HBW1 653 aa9.15□□□□□ -0.94
CTNND1-206ENST00000415361 RNF14Q9UBS8 474 aa9.15□□□□□ -0.94
CTNND1-206ENST00000415361 ZNF189O75820 626 aaPredicted RBP9.15□□□□□ -0.94
CTNND1-206ENST00000415361 EIF2AK2P19525 551 aaKnown RBP9.15□□□□□ -0.94
CTNND1-206ENST00000415361 HOXA13P31271 388 aaPredicted RBP9.15□□□□□ -0.94
CTNND1-206ENST00000415361 THEM5Q8N1Q8 247 aa9.15□□□□□ -0.94
CTNND1-206ENST00000415361 RPF1Q9H9Y2 349 aaKnown RBP9.15□□□□□ -0.94
CTNND1-206ENST00000415361 PCDHA7Q9UN72 937 aa9.15□□□□□ -0.94
CTNND1-206ENST00000415361 CEMIPQ8WUJ3 1361 aa9.15□□□□□ -0.94
CTNND1-206ENST00000415361 TTC4O95801 387 aa9.15□□□□□ -0.94
CTNND1-206ENST00000415361 INHBAP08476 426 aa9.15□□□□□ -0.94
CTNND1-206ENST00000415361 MAPK4P31152 587 aa9.15□□□□□ -0.94
CTNND1-206ENST00000415361 STX1BP61266 288 aa9.15□□□□□ -0.94
CTNND1-206ENST00000415361 CCDC38Q502W7 563 aa9.15□□□□□ -0.94
CTNND1-206ENST00000415361 JADE1Q6IE81 842 aa9.15□□□□□ -0.94
CTNND1-206ENST00000415361 PPP1R18Q6NYC8 613 aa9.15□□□□□ -0.94
CTNND1-206ENST00000415361 ELMOD1Q8N336 334 aa9.15□□□□□ -0.94
CTNND1-206ENST00000415361 LMCD1Q9NZU5 365 aa9.15□□□□□ -0.94
CTNND1-206ENST00000415361 MTMR6Q9Y217 621 aa9.15□□□□□ -0.94
CTNND1-206ENST00000415361 PPP2R2CQ9Y2T4 447 aa9.15□□□□□ -0.94
CTNND1-206ENST00000415361 MROH1Q8NDA8 1641 aa9.15□□□□□ -0.94
CTNND1-206ENST00000415361 USP32Q8NFA0 1604 aa9.15□□□□□ -0.94
CTNND1-206ENST00000415361 GADD45BO75293 160 aaPredicted RBP9.15□□□□□ -0.95
CTNND1-206ENST00000415361 ADKP55263 362 aaKnown RBP9.15□□□□□ -0.95
CTNND1-206ENST00000415361 RABL6Q3YEC7 729 aaPredicted RBP9.15□□□□□ -0.95
CTNND1-206ENST00000415361 C4orf50Q6ZRC1 276 aa9.15□□□□□ -0.95
CTNND1-206ENST00000415361 RNF139Q8WU17 664 aa9.15□□□□□ -0.95
CTNND1-206ENST00000415361 SKA2Q8WVK7 121 aaPredicted RBP9.15□□□□□ -0.95
CTNND1-206ENST00000415361 HOXC10Q9NYD6 342 aa9.15□□□□□ -0.95
CTNND1-206ENST00000415361 UTYO14607 1347 aa9.15□□□□□ -0.95
CTNND1-206ENST00000415361 EVI5O60447 810 aa9.14□□□□□ -0.95
CTNND1-206ENST00000415361 IQCB1Q15051 598 aa9.14□□□□□ -0.95
CTNND1-206ENST00000415361 ANKRD42Q8N9B4 389 aa9.14□□□□□ -0.95
CTNND1-206ENST00000415361 MYRIPQ8NFW9 859 aa9.14□□□□□ -0.95
CTNND1-206ENST00000415361 GJA10Q969M2 543 aa9.14□□□□□ -0.95
CTNND1-206ENST00000415361 TUBGCP2Q9BSJ2 902 aa9.14□□□□□ -0.95
CTNND1-206ENST00000415361 THAP9Q9H5L6 903 aa9.14□□□□□ -0.95
CTNND1-206ENST00000415361 PARVGQ9HBI0 331 aa9.14□□□□□ -0.95
CTNND1-206ENST00000415361 KIAA1586Q9HCI6 787 aa9.14□□□□□ -0.95
CTNND1-206ENST00000415361 RAVER2Q9HCJ3 691 aaKnown RBP9.14□□□□□ -0.95
CTNND1-206ENST00000415361 FEM1BQ9UK73 627 aa9.14□□□□□ -0.95
CTNND1-206ENST00000415361 DAGLAQ9Y4D2 1042 aa9.14□□□□□ -0.95
CTNND1-206ENST00000415361 TTC36A6NLP5 189 aa9.14□□□□□ -0.95
CTNND1-206ENST00000415361 SH2B2O14492 632 aaPredicted RBP9.14□□□□□ -0.95
CTNND1-206ENST00000415361 IKBKBO14920 756 aa9.14□□□□□ -0.95
CTNND1-206ENST00000415361 ZNF157P51786 506 aaPredicted RBP9.14□□□□□ -0.95
CTNND1-206ENST00000415361 ORC2Q13416 577 aaPredicted RBP9.14□□□□□ -0.95
CTNND1-206ENST00000415361 UBE2SQ16763 222 aa9.14□□□□□ -0.95
CTNND1-206ENST00000415361 RYBPQ8N488 228 aaPredicted RBP9.14□□□□□ -0.95
CTNND1-206ENST00000415361 TNS2Q63HR2 1409 aa9.14□□□□□ -0.95
CTNND1-206ENST00000415361 EFCAB8A8MWE9 144 aa9.14□□□□□ -0.95
CTNND1-206ENST00000415361 NMT2O60551 498 aa9.14□□□□□ -0.95
CTNND1-206ENST00000415361 FDX1P10109 184 aa9.14□□□□□ -0.95
CTNND1-206ENST00000415361 FKBP3Q00688 224 aaKnown RBP9.14□□□□□ -0.95
CTNND1-206ENST00000415361 THOC5Q13769 683 aaKnown RBP9.14□□□□□ -0.95
CTNND1-206ENST00000415361 DNAJC24Q6P3W2 148 aa9.14□□□□□ -0.95
CTNND1-206ENST00000415361 TTC25Q96NG3 672 aa9.14□□□□□ -0.95
CTNND1-206ENST00000415361 CPVLQ9H3G5 476 aa9.14□□□□□ -0.95
CTNND1-206ENST00000415361 MAD1L1Q9Y6D9 718 aa9.14□□□□□ -0.95
CTNND1-206ENST00000415361 MGEA5O60502 916 aa9.14□□□□□ -0.95
CTNND1-206ENST00000415361 GPC4O75487 556 aa9.14□□□□□ -0.95
CTNND1-206ENST00000415361 U2AF2P26368 475 aaKnown RBP eCLIP9.14□□□□□ -0.951e-10■■□□□ 14
CTNND1-206ENST00000415361 YWHAGP61981 247 aaKnown RBP eCLIP9.14□□□□□ -0.95
CTNND1-206ENST00000415361 RASSF7Q02833 373 aa9.14□□□□□ -0.95
CTNND1-206ENST00000415361 LRGUKQ96M69 825 aa9.14□□□□□ -0.95
CTNND1-206ENST00000415361 PSMB7Q99436 277 aa9.14□□□□□ -0.95
CTNND1-206ENST00000415361 EPN1Q9Y6I3 576 aaPredicted RBP9.14□□□□□ -0.95
CTNND1-206ENST00000415361 SGK1O00141 431 aa9.14□□□□□ -0.95
CTNND1-206ENST00000415361 CPP00450 1065 aa9.14□□□□□ -0.95
CTNND1-206ENST00000415361 CSF1RP07333 972 aa9.14□□□□□ -0.95
CTNND1-206ENST00000415361 STMN1P16949 149 aa9.14□□□□□ -0.95
CTNND1-206ENST00000415361 GOLGA8FQ08AF8 430 aa9.14□□□□□ -0.95
CTNND1-206ENST00000415361 GOLGA8DPQ0D2H9 430 aa9.14□□□□□ -0.95
CTNND1-206ENST00000415361 ELF2Q15723 593 aa9.14□□□□□ -0.95
CTNND1-206ENST00000415361 ARL6IP4Q66PJ3 421 aaKnown RBP9.14□□□□□ -0.95
CTNND1-206ENST00000415361 LRRC8CQ8TDW0 803 aa9.14□□□□□ -0.95
CTNND1-206ENST00000415361 TBCKQ8TEA7 893 aa9.14□□□□□ -0.95
CTNND1-206ENST00000415361 ZNF653Q96CK0 615 aa9.14□□□□□ -0.95
CTNND1-206ENST00000415361 PBKQ96KB5 322 aa9.14□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms