RNA–Protein interactions for RNA: ENST00000414510.5

PTPA-210, Transcript of protein phosphatase 2 phosphatase activator, human

TSL 1 (best) BASIC

Gene PTPA, Length 1,153 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PTPA-210	ENST00000414510	PLCB4	Q15147	1175 aa		27.59	■■■□□ 2.01
PTPA-210	ENST00000414510	GRIK4	Q16099	956 aa		27.59	■■■□□ 2.01
PTPA-210	ENST00000414510	ZNF618	Q5T7W0	954 aa		27.59	■■■□□ 2.01
PTPA-210	ENST00000414510	TRAF7	Q6Q0C0	670 aa		27.59	■■■□□ 2.01
PTPA-210	ENST00000414510	OTOP2	Q7RTS6	562 aa		27.59	■■■□□ 2.01
PTPA-210	ENST00000414510	MBOAT7	Q96N66	472 aa		27.59	■■■□□ 2.01
PTPA-210	ENST00000414510	CXXC1	Q9P0U4	656 aa	Predicted RBP	27.59	■■■□□ 2.01
PTPA-210	ENST00000414510	TET1	Q8NFU7	2136 aa		27.59	■■■□□ 2.01
PTPA-210	ENST00000414510	LAMA3	Q16787	3333 aa		27.59	■■■□□ 2.01
PTPA-210	ENST00000414510	BACH1	O14867	736 aa		27.58	■■■□□ 2.01
PTPA-210	ENST00000414510	FGB	P02675	491 aa		27.58	■■■□□ 2.01
PTPA-210	ENST00000414510	TRIM29	Q14134	588 aa		27.58	■■■□□ 2.01
PTPA-210	ENST00000414510	GPNMB	Q14956	572 aa		27.58	■■■□□ 2.01
PTPA-210	ENST00000414510	FAM109B	Q6ICB4	259 aa	Predicted RBP	27.58	■■■□□ 2.01
PTPA-210	ENST00000414510	ZNF746	Q6NUN9	644 aa	Predicted RBP	27.58	■■■□□ 2.01
PTPA-210	ENST00000414510	NEK8	Q86SG6	692 aa		27.58	■■■□□ 2.01
PTPA-210	ENST00000414510	DIS3L2	Q8IYB7	885 aa	Known RBP	27.58	■■■□□ 2.01
PTPA-210	ENST00000414510	IL27	Q8NEV9	243 aa		27.58	■■■□□ 2.01
PTPA-210	ENST00000414510	SLC5A5	Q92911	643 aa		27.58	■■■□□ 2.01
PTPA-210	ENST00000414510	ZBTB10	Q96DT7	871 aa		27.58	■■■□□ 2.01
PTPA-210	ENST00000414510	BRMS1	Q9HCU9	246 aa		27.58	■■■□□ 2.01
PTPA-210	ENST00000414510	DDX25	Q9UHL0	483 aa	Known RBP	27.58	■■■□□ 2.01
PTPA-210	ENST00000414510	TRPC6	Q9Y210	931 aa		27.58	■■■□□ 2.01
PTPA-210	ENST00000414510	NRCAM	Q92823	1304 aa		27.58	■■■□□ 2.01
PTPA-210	ENST00000414510	SI	P14410	1827 aa		27.57	■■■□□ 2
PTPA-210	ENST00000414510	BTBD18	B2RXH4	712 aa		27.57	■■■□□ 2
PTPA-210	ENST00000414510	CHMP2A	O43633	222 aa		27.57	■■■□□ 2
PTPA-210	ENST00000414510	GNAT1	P11488	350 aa		27.57	■■■□□ 2
PTPA-210	ENST00000414510	THPO	P40225	353 aa		27.57	■■■□□ 2
PTPA-210	ENST00000414510	IGBP1	P78318	339 aa		27.57	■■■□□ 2
PTPA-210	ENST00000414510	KRT76	Q01546	638 aa		27.57	■■■□□ 2
PTPA-210	ENST00000414510	RASIP1	Q5U651	963 aa		27.57	■■■□□ 2
PTPA-210	ENST00000414510	LRCH2	Q5VUJ6	765 aa		27.57	■■■□□ 2
PTPA-210	ENST00000414510	MIS18BP1	Q6P0N0	1132 aa		27.57	■■■□□ 2
PTPA-210	ENST00000414510	MOXD1	Q6UVY6	613 aa		27.57	■■■□□ 2
PTPA-210	ENST00000414510	RUFY4	Q6ZNE9	571 aa		27.57	■■■□□ 2
PTPA-210	ENST00000414510	PLPPR4	Q7Z2D5	763 aa		27.57	■■■□□ 2
PTPA-210	ENST00000414510	RPUSD2	Q8IZ73	545 aa	Known RBP	27.57	■■■□□ 2
PTPA-210	ENST00000414510	HERVK_113	Q902F9	699 aa		27.57	■■■□□ 2
PTPA-210	ENST00000414510	TCEAL9	Q9UHQ7	104 aa		27.57	■■■□□ 2
PTPA-210	ENST00000414510	MYH9	P35579	1960 aa	Known RBP	27.57	■■■□□ 2
PTPA-210	ENST00000414510	GAS7	O60861	476 aa		27.56	■■■□□ 2
PTPA-210	ENST00000414510	INSRR	P14616	1297 aa		27.56	■■■□□ 2
PTPA-210	ENST00000414510	RFC2	P35250	354 aa		27.56	■■■□□ 2
PTPA-210	ENST00000414510	SWSAP1	Q6NVH7	229 aa		27.56	■■■□□ 2
PTPA-210	ENST00000414510	ETNPPL	Q8TBG4	499 aa		27.56	■■■□□ 2
PTPA-210	ENST00000414510	TRAPPC12	Q8WVT3	735 aa		27.56	■■■□□ 2
PTPA-210	ENST00000414510	TEKT3	Q9BXF9	490 aa		27.56	■■■□□ 2
PTPA-210	ENST00000414510	UNC45A	Q9H3U1	944 aa		27.56	■■■□□ 2
PTPA-210	ENST00000414510	ZNF302	Q9NR11	478 aa		27.56	■■■□□ 2
PTPA-210	ENST00000414510	GBF1	Q92538	1859 aa		27.55	■■■□□ 2
PTPA-210	ENST00000414510	NBN	O60934	754 aa		27.55	■■■□□ 2
PTPA-210	ENST00000414510	CTSH	P09668	335 aa		27.55	■■■□□ 2
PTPA-210	ENST00000414510	MBTPS1	Q14703	1052 aa		27.55	■■■□□ 2
PTPA-210	ENST00000414510	MARCH8	Q5T0T0	291 aa		27.55	■■■□□ 2
PTPA-210	ENST00000414510	FAM160B1	Q5W0V3	765 aa		27.55	■■■□□ 2
PTPA-210	ENST00000414510	SMAP1	Q8IYB5	467 aa	Predicted RBP	27.55	■■■□□ 2
PTPA-210	ENST00000414510	C8orf76	Q96K31	380 aa		27.55	■■■□□ 2
PTPA-210	ENST00000414510	RIT2	Q99578	217 aa		27.55	■■■□□ 2
PTPA-210	ENST00000414510	FTO	Q9C0B1	505 aa	Known RBP eCLIP	27.55	■■■□□ 2
PTPA-210	ENST00000414510	TUBE1	Q9UJT0	475 aa		27.55	■■■□□ 2
PTPA-210	ENST00000414510	SAMM50	Q9Y512	469 aa		27.55	■■■□□ 2
PTPA-210	ENST00000414510	CCNT1	O60563	726 aa	Known RBP	27.54	■■■□□ 2
PTPA-210	ENST00000414510	PSMD10	O75832	226 aa		27.54	■■■□□ 2
PTPA-210	ENST00000414510	SLC34A2	O95436	690 aa		27.54	■■■□□ 2
PTPA-210	ENST00000414510	PFKM	P08237	780 aa		27.54	■■■□□ 2
PTPA-210	ENST00000414510	HMGN5	P82970	282 aa	Known RBP	27.54	■■■□□ 2
PTPA-210	ENST00000414510	PDXDC2P	Q6P474	469 aa		27.54	■■■□□ 2
PTPA-210	ENST00000414510		Q7L0L9	218 aa		27.54	■■■□□ 2
PTPA-210	ENST00000414510	TMX3	Q96JJ7	454 aa		27.54	■■■□□ 2
PTPA-210	ENST00000414510	POTEB3	A0JP26	581 aa		27.53	■■■□□ 2
PTPA-210	ENST00000414510	ZBBX	A8MT70	800 aa		27.53	■■■□□ 2
PTPA-210	ENST00000414510	GRXCR1	A8MXD5	290 aa		27.53	■■■□□ 2
PTPA-210	ENST00000414510	WNT7A	O00755	349 aa		27.53	■■■□□ 2
PTPA-210	ENST00000414510	PSAP	P07602	524 aa		27.53	■■■□□ 2
PTPA-210	ENST00000414510	ATP4A	P20648	1035 aa		27.53	■■■□□ 2
PTPA-210	ENST00000414510	TCTN1	Q2MV58	587 aa		27.53	■■■□□ 2
PTPA-210	ENST00000414510	POTEB	Q6S5H4	581 aa		27.53	■■■□□ 2
PTPA-210	ENST00000414510	GABBR1	Q9UBS5	961 aa		27.53	■■■□□ 2
PTPA-210	ENST00000414510	PCDHA10	Q9Y5I2	948 aa		27.53	■■■□□ 2
PTPA-210	ENST00000414510	IGSF9B	Q9UPX0	1349 aa		27.52	■■■□□ 2
PTPA-210	ENST00000414510	PTPRS	Q13332	1948 aa		27.52	■■■□□ 2
PTPA-210	ENST00000414510	MBLAC1	A4D2B0	266 aa	Predicted RBP	27.52	■■■□□ 2
PTPA-210	ENST00000414510	WDR64	B1ANS9	1081 aa		27.52	■■■□□ 2
PTPA-210	ENST00000414510	PPP4R3A	Q6IN85	833 aa		27.52	■■■□□ 2
PTPA-210	ENST00000414510	TRMT1L	Q7Z2T5	733 aa	Known RBP	27.52	■■■□□ 2
PTPA-210	ENST00000414510	POTED	Q86YR6	584 aa		27.52	■■■□□ 2
PTPA-210	ENST00000414510	FAM184A	Q8NB25	1140 aa		27.52	■■■□□ 2
PTPA-210	ENST00000414510	OSBPL7	Q9BZF2	842 aa		27.52	■■■□□ 2
PTPA-210	ENST00000414510	DISC1	Q9NRI5	854 aa		27.52	■■■□□ 2
PTPA-210	ENST00000414510	RSPH10B2	B2RC85	870 aa		27.51	■■□□□ 1.99
PTPA-210	ENST00000414510	RSPH10B	P0C881	870 aa		27.51	■■□□□ 1.99
PTPA-210	ENST00000414510	GCFC2	P16383	781 aa	Known RBP	27.51	■■□□□ 1.99
PTPA-210	ENST00000414510	SLC26A2	P50443	739 aa		27.51	■■□□□ 1.99
PTPA-210	ENST00000414510	SMAD3	P84022	425 aa	Known RBP	27.51	■■□□□ 1.99
PTPA-210	ENST00000414510	UGCG	Q16739	394 aa		27.51	■■□□□ 1.99
PTPA-210	ENST00000414510	CKAP2L	Q8IYA6	745 aa		27.51	■■□□□ 1.99
PTPA-210	ENST00000414510	ATP8B4	Q8TF62	1192 aa		27.51	■■□□□ 1.99
PTPA-210	ENST00000414510	MTIF3	Q9H2K0	278 aa	Known RBP	27.51	■■□□□ 1.99
PTPA-210	ENST00000414510	KCNMB3	Q9NPA1	279 aa		27.51	■■□□□ 1.99

Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms