RNA–Protein interactions for RNA: ENST00000414407.1

LINC00398-201, long intergenic non-protein coding RNA 398, humanhuman

TSL 2 BASIC

Gene LINC00398, Length 906 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00398-201ENST00000414407 CCDC60Q8IWA6 550 aaPredicted RBP18.56■□□□□ 0.56
LINC00398-201ENST00000414407 RNPEPQ9H4A4 650 aa18.56■□□□□ 0.56
LINC00398-201ENST00000414407 TTC12Q9H892 705 aaPredicted RBP18.56■□□□□ 0.56
LINC00398-201ENST00000414407 HDAC6Q9UBN7 1215 aa18.56■□□□□ 0.56
LINC00398-201ENST00000414407 ALPK3Q96L96 1907 aa18.56■□□□□ 0.56
LINC00398-201ENST00000414407 NRCAMQ92823 1304 aa18.55■□□□□ 0.56
LINC00398-201ENST00000414407 IGSF9BQ9UPX0 1349 aa18.55■□□□□ 0.56
LINC00398-201ENST00000414407 CHMP2AO43633 222 aa18.55■□□□□ 0.56
LINC00398-201ENST00000414407 B4GALT4O60513 344 aa18.55■□□□□ 0.56
LINC00398-201ENST00000414407 SMIM10L2AP0DMW4 78 aa18.55■□□□□ 0.56
LINC00398-201ENST00000414407 SMIM10L2BP0DMW5 78 aa18.55■□□□□ 0.56
LINC00398-201ENST00000414407 GNAT1P11488 350 aa18.55■□□□□ 0.56
LINC00398-201ENST00000414407 PRPHP41219 470 aa18.55■□□□□ 0.56
LINC00398-201ENST00000414407 TXKP42681 527 aa18.55■□□□□ 0.56
LINC00398-201ENST00000414407 NBR1Q14596 966 aa18.55■□□□□ 0.56
LINC00398-201ENST00000414407 PDXDC2PQ6P474 469 aa18.55■□□□□ 0.56
LINC00398-201ENST00000414407 SPRYD3Q8NCJ5 442 aa18.55■□□□□ 0.56
LINC00398-201ENST00000414407 PDLIM7Q9NR12 457 aa18.55■□□□□ 0.56
LINC00398-201ENST00000414407 GABBR1Q9UBS5 961 aa18.55■□□□□ 0.56
LINC00398-201ENST00000414407 C17orf102A2RUQ5 167 aa18.54■□□□□ 0.56
LINC00398-201ENST00000414407 EML1O00423 815 aa18.54■□□□□ 0.56
LINC00398-201ENST00000414407 KIAA0355O15063 1070 aa18.54■□□□□ 0.56
LINC00398-201ENST00000414407 BMP15O95972 392 aa18.54■□□□□ 0.56
LINC00398-201ENST00000414407 PTGDRQ13258 359 aa18.54■□□□□ 0.56
LINC00398-201ENST00000414407 PLCB4Q15147 1175 aa18.54■□□□□ 0.56
LINC00398-201ENST00000414407 EPHA7Q15375 998 aa18.54■□□□□ 0.56
LINC00398-201ENST00000414407 GDF6Q6KF10 455 aaPredicted RBP18.54■□□□□ 0.56
LINC00398-201ENST00000414407 ATP8B4Q8TF62 1192 aa18.54■□□□□ 0.56
LINC00398-201ENST00000414407 ATP6V0A1Q93050 837 aa18.54■□□□□ 0.56
LINC00398-201ENST00000414407 TRPV6Q9H1D0 765 aa18.54■□□□□ 0.56
LINC00398-201ENST00000414407 TRMT13Q9NUP7 481 aaKnown RBP18.54■□□□□ 0.56
LINC00398-201ENST00000414407 TMEM39AQ9NV64 488 aa18.54■□□□□ 0.56
LINC00398-201ENST00000414407 PRKAG2Q9UGJ0 569 aa18.54■□□□□ 0.56
LINC00398-201ENST00000414407 TBX21Q9UL17 535 aa18.54■□□□□ 0.56
LINC00398-201ENST00000414407 TNRC18O15417 2968 aaPredicted RBP18.54■□□□□ 0.56
LINC00398-201ENST00000414407 POTEB3A0JP26 581 aa18.53■□□□□ 0.56
LINC00398-201ENST00000414407 RRN3P2A6NIE6 340 aa18.53■□□□□ 0.56
LINC00398-201ENST00000414407 HBP1O60381 514 aa18.53■□□□□ 0.56
LINC00398-201ENST00000414407 DKC1O60832 514 aaKnown RBP eCLIP18.53■□□□□ 0.56
LINC00398-201ENST00000414407 P4HBP07237 508 aaKnown RBP18.53■□□□□ 0.56
LINC00398-201ENST00000414407 ZSCAN22P10073 491 aaPredicted RBP18.53■□□□□ 0.56
LINC00398-201ENST00000414407 MARK3P27448 753 aa18.53■□□□□ 0.56
LINC00398-201ENST00000414407 ADAM17P78536 824 aa18.53■□□□□ 0.56
LINC00398-201ENST00000414407 ATP2C1P98194 919 aaPredicted RBP18.53■□□□□ 0.56
LINC00398-201ENST00000414407 PTGISQ16647 500 aa18.53■□□□□ 0.56
LINC00398-201ENST00000414407 TMEM266Q2M3C6 531 aa18.53■□□□□ 0.56
LINC00398-201ENST00000414407 POTEBQ6S5H4 581 aa18.53■□□□□ 0.56
LINC00398-201ENST00000414407 BBXQ8WY36 941 aaPredicted RBP18.53■□□□□ 0.56
LINC00398-201ENST00000414407 FAM167AQ96KS9 214 aa18.53■□□□□ 0.56
LINC00398-201ENST00000414407 CEP131Q9UPN4 1083 aa18.53■□□□□ 0.56
LINC00398-201ENST00000414407 ATP4AP20648 1035 aa18.52■□□□□ 0.56
LINC00398-201ENST00000414407 FXR2P51116 673 aaKnown RBP eCLIP18.52■□□□□ 0.56
LINC00398-201ENST00000414407 PSMC5P62195 406 aa18.52■□□□□ 0.56
LINC00398-201ENST00000414407 PPFIA1Q13136 1202 aa18.52■□□□□ 0.56
LINC00398-201ENST00000414407 PDIA5Q14554 519 aa18.52■□□□□ 0.56
LINC00398-201ENST00000414407 ARL6IP4Q66PJ3 421 aaKnown RBP18.52■□□□□ 0.56
LINC00398-201ENST00000414407 NCAPH2Q6IBW4 605 aa18.52■□□□□ 0.56
LINC00398-201ENST00000414407 NEK9Q8TD19 979 aa18.52■□□□□ 0.56
LINC00398-201ENST00000414407 CTAGE1Q96RT6 745 aa18.52■□□□□ 0.56
LINC00398-201ENST00000414407 TRPC6Q9Y210 931 aa18.52■□□□□ 0.56
LINC00398-201ENST00000414407 NOD1Q9Y239 953 aa18.52■□□□□ 0.56
LINC00398-201ENST00000414407 TRIM43BA6NCK2 446 aa18.51■□□□□ 0.55
LINC00398-201ENST00000414407 INSRRP14616 1297 aa18.51■□□□□ 0.55
LINC00398-201ENST00000414407 TECP42680 631 aa18.51■□□□□ 0.55
LINC00398-201ENST00000414407 QARSP47897 775 aaKnown RBP18.51■□□□□ 0.55
LINC00398-201ENST00000414407 PTK7Q13308 1070 aa18.51■□□□□ 0.55
LINC00398-201ENST00000414407 GRIK4Q16099 956 aa18.51■□□□□ 0.55
LINC00398-201ENST00000414407 SH3RF1Q7Z6J0 888 aa18.51■□□□□ 0.55
LINC00398-201ENST00000414407 CKAP2LQ8IYA6 745 aa18.51■□□□□ 0.55
LINC00398-201ENST00000414407 PPP1R13LQ8WUF5 828 aa18.51■□□□□ 0.55
LINC00398-201ENST00000414407 LMBR1Q8WVP7 490 aa18.51■□□□□ 0.55
LINC00398-201ENST00000414407 TRIM43Q96BQ3 446 aaPredicted RBP18.51■□□□□ 0.55
LINC00398-201ENST00000414407 RAB34Q9BZG1 259 aa18.51■□□□□ 0.55
LINC00398-201ENST00000414407 NRBP2Q9NSY0 501 aa18.51■□□□□ 0.55
LINC00398-201ENST00000414407 SETD4Q9NVD3 440 aa18.51■□□□□ 0.55
LINC00398-201ENST00000414407 STK24Q9Y6E0 443 aa18.51■□□□□ 0.55
LINC00398-201ENST00000414407 COL1A2P08123 1366 aa18.51■□□□□ 0.55
LINC00398-201ENST00000414407 MBLAC1A4D2B0 266 aaPredicted RBP18.5■□□□□ 0.55
LINC00398-201ENST00000414407 ZNF862O60290 1169 aa18.5■□□□□ 0.55
LINC00398-201ENST00000414407 F13A1P00488 732 aa18.5■□□□□ 0.55
LINC00398-201ENST00000414407 OATP04181 439 aa18.5■□□□□ 0.55
LINC00398-201ENST00000414407 RBL2Q08999 1139 aa18.5■□□□□ 0.55
LINC00398-201ENST00000414407 HIC1Q14526 733 aa18.5■□□□□ 0.55
LINC00398-201ENST00000414407 UGCGQ16739 394 aa18.5■□□□□ 0.55
LINC00398-201ENST00000414407 XKR3Q5GH77 459 aa18.5■□□□□ 0.55
LINC00398-201ENST00000414407 ZNF484Q5JVG2 852 aa18.5■□□□□ 0.55
LINC00398-201ENST00000414407 DTHD1Q6ZMT9 781 aa18.5■□□□□ 0.55
LINC00398-201ENST00000414407 SERINC5Q86VE9 423 aa18.5■□□□□ 0.55
LINC00398-201ENST00000414407 CCDC155Q8N6L0 562 aa18.5■□□□□ 0.55
LINC00398-201ENST00000414407 HSD17B14Q9BPX1 270 aa18.5■□□□□ 0.55
LINC00398-201ENST00000414407 PRDM5Q9NQX1 630 aaPredicted RBP18.5■□□□□ 0.55
LINC00398-201ENST00000414407 MORC2Q9Y6X9 1032 aaPredicted RBP18.5■□□□□ 0.55
LINC00398-201ENST00000414407 H0YGN5 161 aa18.49■□□□□ 0.55
LINC00398-201ENST00000414407 PITPNM1O00562 1244 aa18.49■□□□□ 0.55
LINC00398-201ENST00000414407 TIMP1P01033 207 aa18.49■□□□□ 0.55
LINC00398-201ENST00000414407 RAG1P15918 1043 aa18.49■□□□□ 0.55
LINC00398-201ENST00000414407 ANP32AP39687 249 aaKnown RBP18.49■□□□□ 0.55
LINC00398-201ENST00000414407 ZNF200P98182 395 aaPredicted RBP18.49■□□□□ 0.55
LINC00398-201ENST00000414407 PRKCEQ02156 737 aa18.49■□□□□ 0.55
LINC00398-201ENST00000414407 BFSP2Q13515 415 aa18.49■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms