RNA–Protein interactions for RNA: ENST00000413987.1

SNHG3-201, Transcript of small nucleolar RNA host gene 3, humanhuman

TSL 1 (best)

Gene SNHG3, Length 2,201 nt, Biotype retained intron, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG3-201ENST00000413987 ABCD1P33897 745 aa10.37□□□□□ -0.75
SNHG3-201ENST00000413987 MAGEA9P43362 315 aa10.37□□□□□ -0.75
SNHG3-201ENST00000413987 PRELPP51888 382 aa10.37□□□□□ -0.75
SNHG3-201ENST00000413987 UBASH3AP57075 661 aa10.37□□□□□ -0.75
SNHG3-201ENST00000413987 UBXN2AP68543 259 aa10.37□□□□□ -0.75
SNHG3-201ENST00000413987 AGAP9Q5VTM2 703 aa10.37□□□□□ -0.75
SNHG3-201ENST00000413987 FAM180BQ6P0A1 224 aa10.37□□□□□ -0.75
SNHG3-201ENST00000413987 PLBD1Q6P4A8 553 aa10.37□□□□□ -0.75
SNHG3-201ENST00000413987 THAP11Q96EK4 314 aa10.37□□□□□ -0.75
SNHG3-201ENST00000413987 EYA3Q99504 573 aa10.37□□□□□ -0.75
SNHG3-201ENST00000413987 DSCC1Q9BVC3 393 aa10.37□□□□□ -0.75
SNHG3-201ENST00000413987 HOXC10Q9NYD6 342 aa10.37□□□□□ -0.75
SNHG3-201ENST00000413987 PDS5AQ29RF7 1337 aaKnown RBP10.37□□□□□ -0.75
SNHG3-201ENST00000413987 GOLGA6L9A6NEM1 432 aa10.37□□□□□ -0.75
SNHG3-201ENST00000413987 BOLA2-SMG1P6H3BVE0 249 aa10.37□□□□□ -0.75
SNHG3-201ENST00000413987 NFKBIEO00221 500 aa10.37□□□□□ -0.75
SNHG3-201ENST00000413987 MPSTP25325 297 aa10.37□□□□□ -0.75
SNHG3-201ENST00000413987 EVCP57679 992 aa10.37□□□□□ -0.75
SNHG3-201ENST00000413987 GRM1Q13255 1194 aa10.37□□□□□ -0.75
SNHG3-201ENST00000413987 ZRSR1Q15695 479 aaKnown RBP10.37□□□□□ -0.75
SNHG3-201ENST00000413987 TTC31Q49AM3 519 aaPredicted RBP10.37□□□□□ -0.75
SNHG3-201ENST00000413987 CELF2-AS1Q8N7Q2 184 aa10.37□□□□□ -0.75
SNHG3-201ENST00000413987 PLPP7Q8NBV4 271 aa10.37□□□□□ -0.75
SNHG3-201ENST00000413987 LRRN4CLQ8ND94 238 aa10.37□□□□□ -0.75
SNHG3-201ENST00000413987 SH3RF3Q8TEJ3 882 aaPredicted RBP10.37□□□□□ -0.75
SNHG3-201ENST00000413987 ADAM21Q9UKJ8 722 aa10.37□□□□□ -0.75
SNHG3-201ENST00000413987 RCOR1Q9UKL0 485 aa10.37□□□□□ -0.75
SNHG3-201ENST00000413987 TMX2Q9Y320 296 aa10.37□□□□□ -0.75
SNHG3-201ENST00000413987 TACC3Q9Y6A5 838 aa10.37□□□□□ -0.75
SNHG3-201ENST00000413987 BAZ2AQ9UIF9 1905 aaKnown RBP10.36□□□□□ -0.75
SNHG3-201ENST00000413987 A0A087X0B3 334 aa10.36□□□□□ -0.75
SNHG3-201ENST00000413987 TRIM64A6NGJ6 449 aa10.36□□□□□ -0.75
SNHG3-201ENST00000413987 TRIM64BA6NI03 449 aa10.36□□□□□ -0.75
SNHG3-201ENST00000413987 H3BQV1 296 aa10.36□□□□□ -0.75
SNHG3-201ENST00000413987 URI1O94763 535 aaPredicted RBP10.36□□□□□ -0.75
SNHG3-201ENST00000413987 IL4RP24394 825 aa10.36□□□□□ -0.75
SNHG3-201ENST00000413987 LMAN1P49257 510 aa10.36□□□□□ -0.75
SNHG3-201ENST00000413987 SH3BGRP55822 239 aaPredicted RBP10.36□□□□□ -0.75
SNHG3-201ENST00000413987 TUBB4BP68371 445 aa10.36□□□□□ -0.75
SNHG3-201ENST00000413987 MTMR1Q13613 665 aa10.36□□□□□ -0.75
SNHG3-201ENST00000413987 FXNQ16595 210 aa10.36□□□□□ -0.75
SNHG3-201ENST00000413987 COBLL1Q53SF7 1204 aa10.36□□□□□ -0.75
SNHG3-201ENST00000413987 RILPL1Q5EBL4 403 aa10.36□□□□□ -0.75
SNHG3-201ENST00000413987 IFFO2Q5TF58 517 aa10.36□□□□□ -0.75
SNHG3-201ENST00000413987 RTL10Q7L3V2 364 aa10.36□□□□□ -0.75
SNHG3-201ENST00000413987 TMC6Q7Z403 805 aa10.36□□□□□ -0.75
SNHG3-201ENST00000413987 TBC1D10CQ8IV04 446 aa10.36□□□□□ -0.75
SNHG3-201ENST00000413987 REXO1L1PQ8IX06 675 aa10.36□□□□□ -0.75
SNHG3-201ENST00000413987 AOPEPQ8N6M6 819 aa10.36□□□□□ -0.75
SNHG3-201ENST00000413987 RABGGTAQ92696 567 aa10.36□□□□□ -0.75
SNHG3-201ENST00000413987 KIF12Q96FN5 646 aa10.36□□□□□ -0.75
SNHG3-201ENST00000413987 NCAPGQ9BPX3 1015 aa10.36□□□□□ -0.75
SNHG3-201ENST00000413987 KIAA1586Q9HCI6 787 aa10.36□□□□□ -0.75
SNHG3-201ENST00000413987 EIF4ENIF1Q9NRA8 985 aaKnown RBP10.36□□□□□ -0.75
SNHG3-201ENST00000413987 KIAA1024Q9UPX6 916 aa10.36□□□□□ -0.75
SNHG3-201ENST00000413987 MYH2Q9UKX2 1941 aa10.36□□□□□ -0.75
SNHG3-201ENST00000413987 CCDC88AQ3V6T2 1871 aa10.36□□□□□ -0.75
SNHG3-201ENST00000413987 SALL1Q9NSC2 1324 aa10.36□□□□□ -0.75
SNHG3-201ENST00000413987 ANO9A1A5B4 782 aa10.35□□□□□ -0.75
SNHG3-201ENST00000413987 FOXN3O00409 490 aaPredicted RBP10.35□□□□□ -0.75
SNHG3-201ENST00000413987 RPS6KB1P23443 525 aa10.35□□□□□ -0.75
SNHG3-201ENST00000413987 SOX5P35711 763 aa10.35□□□□□ -0.75
SNHG3-201ENST00000413987 ZNF280AP59817 542 aaPredicted RBP10.35□□□□□ -0.75
SNHG3-201ENST00000413987 KRT72Q14CN4 511 aa10.35□□□□□ -0.75
SNHG3-201ENST00000413987 ARMCX5Q6P1M9 558 aa10.35□□□□□ -0.75
SNHG3-201ENST00000413987 OTOP3Q7RTS5 596 aa10.35□□□□□ -0.75
SNHG3-201ENST00000413987 IFNL1Q8IU54 200 aa10.35□□□□□ -0.75
SNHG3-201ENST00000413987 PASD1Q8IV76 773 aa10.35□□□□□ -0.75
SNHG3-201ENST00000413987 MICALL1Q8N3F8 863 aa10.35□□□□□ -0.75
SNHG3-201ENST00000413987 SMCR8Q8TEV9 937 aaPredicted RBP10.35□□□□□ -0.75
SNHG3-201ENST00000413987 GJA10Q969M2 543 aa10.35□□□□□ -0.75
SNHG3-201ENST00000413987 MFSD3Q96ES6 412 aa10.35□□□□□ -0.75
SNHG3-201ENST00000413987 ZNF396Q96N95 335 aaPredicted RBP10.35□□□□□ -0.75
SNHG3-201ENST00000413987 ZMAT2Q96NC0 199 aaKnown RBP10.35□□□□□ -0.75
SNHG3-201ENST00000413987 CARD6Q9BX69 1037 aa10.35□□□□□ -0.75
SNHG3-201ENST00000413987 RASSF1Q9NS23 344 aa10.35□□□□□ -0.75
SNHG3-201ENST00000413987 EFR3BQ9Y2G0 817 aa10.35□□□□□ -0.75
SNHG3-201ENST00000413987 FAM205AQ6ZU69 1335 aa10.35□□□□□ -0.75
SNHG3-201ENST00000413987 E7EWF7 191 aa10.35□□□□□ -0.75
SNHG3-201ENST00000413987 SEC31AO94979 1220 aaKnown RBP10.35□□□□□ -0.75
SNHG3-201ENST00000413987 CYP2D6P10635 497 aa10.35□□□□□ -0.75
SNHG3-201ENST00000413987 BTDP43251 543 aa10.35□□□□□ -0.75
SNHG3-201ENST00000413987 PKN2Q16513 984 aaKnown RBP10.35□□□□□ -0.75
SNHG3-201ENST00000413987 GALNT5Q7Z7M9 940 aa10.35□□□□□ -0.75
SNHG3-201ENST00000413987 RTKN2Q8IZC4 609 aa10.35□□□□□ -0.75
SNHG3-201ENST00000413987 NKAPQ8N5F7 415 aaKnown RBP10.35□□□□□ -0.75
SNHG3-201ENST00000413987 TBATAQ96M53 351 aa10.35□□□□□ -0.75
SNHG3-201ENST00000413987 NAPBQ9H115 298 aa10.35□□□□□ -0.75
SNHG3-201ENST00000413987 DEF6Q9H4E7 631 aa10.35□□□□□ -0.75
SNHG3-201ENST00000413987 LCMT1Q9UIC8 334 aa10.35□□□□□ -0.75
SNHG3-201ENST00000413987 JRKLQ9Y4A0 524 aa10.35□□□□□ -0.75
SNHG3-201ENST00000413987 TTLL3Q9Y4R7 772 aa10.35□□□□□ -0.75
SNHG3-201ENST00000413987 MAST2Q6P0Q8 1798 aa10.35□□□□□ -0.75
SNHG3-201ENST00000413987 CCDC151A5D8V7 595 aa10.34□□□□□ -0.75
SNHG3-201ENST00000413987 MINDY4BA8MYZ0 360 aa10.34□□□□□ -0.75
SNHG3-201ENST00000413987 POTEB2H3BUK9 544 aa10.34□□□□□ -0.75
SNHG3-201ENST00000413987 PDPK1O15530 556 aa10.34□□□□□ -0.75
SNHG3-201ENST00000413987 SASH3O75995 380 aa10.34□□□□□ -0.75
SNHG3-201ENST00000413987 CTNNA1P35221 906 aaKnown RBP10.34□□□□□ -0.75
SNHG3-201ENST00000413987 RAD52P43351 418 aa10.34□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 47.9 ms