RNA–Protein interactions for RNA: ENST00000413852.5

SEMA3F-202, Transcript of semaphorin 3F, humanhuman

TSL 1 (best) BASIC

Gene SEMA3F, Length 3,212 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3F-202ENST00000413852 DDB1Q16531 1140 aa15.97■□□□□ 0.15
SEMA3F-202ENST00000413852 TMEM266Q2M3C6 531 aa15.97■□□□□ 0.15
SEMA3F-202ENST00000413852 GLE1Q53GS7 698 aaKnown RBP15.97■□□□□ 0.15
SEMA3F-202ENST00000413852 FAM182BQ5T319 152 aa15.97■□□□□ 0.15
SEMA3F-202ENST00000413852 KSR1Q8IVT5 923 aa15.97■□□□□ 0.15
SEMA3F-202ENST00000413852 GANQ9H2C0 597 aa15.97■□□□□ 0.15
SEMA3F-202ENST00000413852 ATP8A1Q9Y2Q0 1164 aa15.97■□□□□ 0.15
SEMA3F-202ENST00000413852 LEMD3Q9Y2U8 911 aa15.97■□□□□ 0.15
SEMA3F-202ENST00000413852 DCCP43146 1447 aa15.97■□□□□ 0.15
SEMA3F-202ENST00000413852 GOLGA6L10A6NI86 522 aa15.96■□□□□ 0.15
SEMA3F-202ENST00000413852 RBAK-RBAKDNI3L0D1 243 aa15.96■□□□□ 0.15
SEMA3F-202ENST00000413852 FAM107AO95990 144 aa15.96■□□□□ 0.15
SEMA3F-202ENST00000413852 ABCB4P21439 1286 aa15.96■□□□□ 0.15
SEMA3F-202ENST00000413852 HSPA9P38646 679 aaKnown RBP15.96■□□□□ 0.15
SEMA3F-202ENST00000413852 KCTD1Q719H9 257 aa15.96■□□□□ 0.15
SEMA3F-202ENST00000413852 CCDC91Q7Z6B0 441 aa15.96■□□□□ 0.15
SEMA3F-202ENST00000413852 SPAG5Q96R06 1193 aa15.96■□□□□ 0.15
SEMA3F-202ENST00000413852 SPZ1Q9BXG8 430 aa15.96■□□□□ 0.15
SEMA3F-202ENST00000413852 YY1AP1Q9H869 796 aa15.96■□□□□ 0.15
SEMA3F-202ENST00000413852 DDX25Q9UHL0 483 aaKnown RBP15.96■□□□□ 0.15
SEMA3F-202ENST00000413852 EPB41L3Q9Y2J2 1087 aaPredicted RBP15.96■□□□□ 0.15
SEMA3F-202ENST00000413852 KIAA1551Q9HCM1 1747 aa15.96■□□□□ 0.15
SEMA3F-202ENST00000413852 GOLGA6L7A0A1B0GV03 622 aa15.96■□□□□ 0.15
SEMA3F-202ENST00000413852 KRT18P05783 430 aaKnown RBP15.96■□□□□ 0.15
SEMA3F-202ENST00000413852 ADCY7P51828 1080 aa15.96■□□□□ 0.15
SEMA3F-202ENST00000413852 SWT1Q5T5J6 900 aaKnown RBP15.96■□□□□ 0.15
SEMA3F-202ENST00000413852 GALNT17Q6IS24 598 aa15.96■□□□□ 0.15
SEMA3F-202ENST00000413852 IRF2BP2Q7Z5L9 587 aa15.96■□□□□ 0.15
SEMA3F-202ENST00000413852 FAM228AQ86W67 206 aa15.96■□□□□ 0.15
SEMA3F-202ENST00000413852 TRIM59Q8IWR1 403 aa15.96■□□□□ 0.15
SEMA3F-202ENST00000413852 TEX11Q8IYF3 940 aa15.96■□□□□ 0.15
SEMA3F-202ENST00000413852 NLRP3Q96P20 1036 aa15.96■□□□□ 0.15
SEMA3F-202ENST00000413852 RSPH10B2B2RC85 870 aa15.96■□□□□ 0.14
SEMA3F-202ENST00000413852 RSPH10BP0C881 870 aa15.96■□□□□ 0.14
SEMA3F-202ENST00000413852 POLD1P28340 1107 aa15.96■□□□□ 0.14
SEMA3F-202ENST00000413852 RFC4P35249 363 aa15.96■□□□□ 0.14
SEMA3F-202ENST00000413852 TNNC1P63316 161 aa15.96■□□□□ 0.14
SEMA3F-202ENST00000413852 DHX9Q08211 1270 aaKnown RBP15.96■□□□□ 0.14
SEMA3F-202ENST00000413852 GLG1Q92896 1179 aa15.96■□□□□ 0.14
SEMA3F-202ENST00000413852 ISCUQ9H1K1 167 aa15.96■□□□□ 0.14
SEMA3F-202ENST00000413852 VCPKMTQ9H867 229 aa15.96■□□□□ 0.14
SEMA3F-202ENST00000413852 GOPCQ9HD26 462 aa15.96■□□□□ 0.14
SEMA3F-202ENST00000413852 RTCBQ9Y3I0 505 aaKnown RBP15.96■□□□□ 0.14
SEMA3F-202ENST00000413852 GMNCA6NCL1 334 aa15.95■□□□□ 0.14
SEMA3F-202ENST00000413852 NR2F2P24468 414 aa15.95■□□□□ 0.14
SEMA3F-202ENST00000413852 KRT71Q3SY84 523 aa15.95■□□□□ 0.14
SEMA3F-202ENST00000413852 U2AF1L4Q8WU68 220 aaKnown RBP15.95■□□□□ 0.14
SEMA3F-202ENST00000413852 EMILIN3Q9NT22 766 aa15.95■□□□□ 0.14
SEMA3F-202ENST00000413852 PNMA2Q9UL42 364 aa15.95■□□□□ 0.14
SEMA3F-202ENST00000413852 ZNF652Q9Y2D9 606 aa15.95■□□□□ 0.14
SEMA3F-202ENST00000413852 FOXO6A8MYZ6 492 aa15.95■□□□□ 0.14
SEMA3F-202ENST00000413852 FGFR1OPO95684 399 aaKnown RBP15.95■□□□□ 0.14
SEMA3F-202ENST00000413852 ALKBH5Q6P6C2 394 aaKnown RBP15.95■□□□□ 0.14
SEMA3F-202ENST00000413852 CCDC121Q6ZUS5 278 aa15.95■□□□□ 0.14
SEMA3F-202ENST00000413852 SEC16BQ96JE7 1060 aa15.95■□□□□ 0.14
SEMA3F-202ENST00000413852 STK17AQ9UEE5 414 aa15.95■□□□□ 0.14
SEMA3F-202ENST00000413852 SLC12A6Q9UHW9 1150 aa15.95■□□□□ 0.14
SEMA3F-202ENST00000413852 HDAC9Q9UKV0 1011 aa15.95■□□□□ 0.14
SEMA3F-202ENST00000413852 SNED1Q8TER0 1413 aa15.95■□□□□ 0.14
SEMA3F-202ENST00000413852 HMGB1P1B2RPK0 211 aaPredicted RBP15.94■□□□□ 0.14
SEMA3F-202ENST00000413852 HGSO14964 777 aaPredicted RBP15.94■□□□□ 0.14
SEMA3F-202ENST00000413852 GFPT2O94808 682 aa15.94■□□□□ 0.14
SEMA3F-202ENST00000413852 PLA2G4BP0C869 781 aa15.94■□□□□ 0.14
SEMA3F-202ENST00000413852 MYBP10242 640 aa15.94■□□□□ 0.14
SEMA3F-202ENST00000413852 FXR2P51116 673 aaKnown RBP eCLIP15.94■□□□□ 0.14
SEMA3F-202ENST00000413852 PABPC4Q13310 644 aaKnown RBP eCLIP15.94■□□□□ 0.14
SEMA3F-202ENST00000413852 TMEM119Q4V9L6 283 aa15.94■□□□□ 0.14
SEMA3F-202ENST00000413852 ARSHQ5FYA8 562 aa15.94■□□□□ 0.14
SEMA3F-202ENST00000413852 DAAM2Q86T65 1068 aa15.94■□□□□ 0.14
SEMA3F-202ENST00000413852 WHAMMQ8TF30 809 aa15.94■□□□□ 0.14
SEMA3F-202ENST00000413852 TMEM59LQ9UK28 342 aa15.94■□□□□ 0.14
SEMA3F-202ENST00000413852 PHLPP1O60346 1717 aa15.94■□□□□ 0.14
SEMA3F-202ENST00000413852 MED24O75448 989 aa15.94■□□□□ 0.14
SEMA3F-202ENST00000413852 AKR1B1P15121 316 aa15.94■□□□□ 0.14
SEMA3F-202ENST00000413852 C6orf89Q6UWU4 347 aa15.94■□□□□ 0.14
SEMA3F-202ENST00000413852 PLCB1Q9NQ66 1216 aa15.94■□□□□ 0.14
SEMA3F-202ENST00000413852 NAGPAQ9UK23 515 aa15.94■□□□□ 0.14
SEMA3F-202ENST00000413852 PCDHA12Q9UN75 941 aa15.94■□□□□ 0.14
SEMA3F-202ENST00000413852 USP17L10C9JJH3 530 aa15.94■□□□□ 0.14
SEMA3F-202ENST00000413852 CAND2O75155 1236 aa15.94■□□□□ 0.14
SEMA3F-202ENST00000413852 UCHL3P15374 230 aa15.94■□□□□ 0.14
SEMA3F-202ENST00000413852 SCP2P22307 547 aa15.94■□□□□ 0.14
SEMA3F-202ENST00000413852 SLCO1A2P46721 670 aa15.94■□□□□ 0.14
SEMA3F-202ENST00000413852 CYP4A11Q02928 519 aa15.94■□□□□ 0.14
SEMA3F-202ENST00000413852 DPP8Q6V1X1 898 aaPredicted RBP15.94■□□□□ 0.14
SEMA3F-202ENST00000413852 PEX26Q7Z412 305 aa15.94■□□□□ 0.14
SEMA3F-202ENST00000413852 MREGQ8N565 214 aa15.94■□□□□ 0.14
SEMA3F-202ENST00000413852 SCFD2Q8WU76 684 aa15.94■□□□□ 0.14
SEMA3F-202ENST00000413852 KCTD10Q9H3F6 313 aa15.94■□□□□ 0.14
SEMA3F-202ENST00000413852 PCDHA2Q9Y5H9 948 aa15.94■□□□□ 0.14
SEMA3F-202ENST00000413852 IGSF9BQ9UPX0 1349 aa15.94■□□□□ 0.14
SEMA3F-202ENST00000413852 LRRC57Q8N9N7 239 aa15.93■□□□□ 0.14
SEMA3F-202ENST00000413852 TBC1D31Q96DN5 1066 aa15.93■□□□□ 0.14
SEMA3F-202ENST00000413852 RTFDC1Q9BY42 306 aaPredicted RBP15.93■□□□□ 0.14
SEMA3F-202ENST00000413852 ERVK-5Q9HDB9 667 aa15.93■□□□□ 0.14
SEMA3F-202ENST00000413852 TSKSQ9UJT2 592 aa15.93■□□□□ 0.14
SEMA3F-202ENST00000413852 FAM196BA6NMK8 535 aa15.93■□□□□ 0.14
SEMA3F-202ENST00000413852 RPSAP08865 295 aaKnown RBP15.93■□□□□ 0.14
SEMA3F-202ENST00000413852 HOXD13P35453 343 aa15.93■□□□□ 0.14
SEMA3F-202ENST00000413852 CD302Q8IX05 232 aa15.93■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms