RNA–Protein interactions for RNA: ENST00000413374.1

NCKIPSD-202, Transcript of NCK interacting protein with SH3 domain, humanhuman

TSL 3

Gene NCKIPSD, Length 725 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCKIPSD-202ENST00000413374 CTDNEP1O95476 244 aa11.56□□□□□ -0.56
NCKIPSD-202ENST00000413374 CXCL10P02778 98 aa11.56□□□□□ -0.56
NCKIPSD-202ENST00000413374 HOXC8P31273 242 aa11.56□□□□□ -0.56
NCKIPSD-202ENST00000413374 FOSBP53539 338 aa11.56□□□□□ -0.56
NCKIPSD-202ENST00000413374 WDR5P61964 334 aaKnown RBP11.56□□□□□ -0.56
NCKIPSD-202ENST00000413374 DEFB103AP81534 67 aa11.56□□□□□ -0.56
NCKIPSD-202ENST00000413374 IKBKEQ14164 716 aa11.56□□□□□ -0.56
NCKIPSD-202ENST00000413374 ANKRD1Q15327 319 aa11.56□□□□□ -0.56
NCKIPSD-202ENST00000413374 ME3Q16798 604 aa11.56□□□□□ -0.56
NCKIPSD-202ENST00000413374 MARCH8Q5T0T0 291 aa11.56□□□□□ -0.56
NCKIPSD-202ENST00000413374 PPP2R2DQ66LE6 453 aa11.56□□□□□ -0.56
NCKIPSD-202ENST00000413374 MCTP2Q6DN12 878 aa11.56□□□□□ -0.56
NCKIPSD-202ENST00000413374 ABHD15Q6UXT9 468 aa11.56□□□□□ -0.56
NCKIPSD-202ENST00000413374 LIN28BQ6ZN17 250 aaKnown RBP eCLIP11.56□□□□□ -0.56
NCKIPSD-202ENST00000413374 NIPA1Q7RTP0 329 aa11.56□□□□□ -0.56
NCKIPSD-202ENST00000413374 HERC6Q8IVU3 1022 aa11.56□□□□□ -0.56
NCKIPSD-202ENST00000413374 TEX2Q8IWB9 1127 aa11.56□□□□□ -0.56
NCKIPSD-202ENST00000413374 BLIDQ8IZY5 108 aa11.56□□□□□ -0.56
NCKIPSD-202ENST00000413374 DNAJB3Q8WWF6 145 aa11.56□□□□□ -0.56
NCKIPSD-202ENST00000413374 FAM49AQ9H0Q0 323 aaPredicted RBP11.56□□□□□ -0.56
NCKIPSD-202ENST00000413374 SH3GLB2Q9NR46 395 aa11.56□□□□□ -0.56
NCKIPSD-202ENST00000413374 PCDHA11Q9Y5I1 949 aa11.56□□□□□ -0.56
NCKIPSD-202ENST00000413374 KIAA1217Q5T5P2 1943 aa11.56□□□□□ -0.56
NCKIPSD-202ENST00000413374 TMEM265A0A087WTH1 108 aa11.55□□□□□ -0.56
NCKIPSD-202ENST00000413374 KIF28PB7ZC32 967 aa11.55□□□□□ -0.56
NCKIPSD-202ENST00000413374 TLL1O43897 1013 aa11.55□□□□□ -0.56
NCKIPSD-202ENST00000413374 CDKL5O76039 1030 aa11.55□□□□□ -0.56
NCKIPSD-202ENST00000413374 ARHGEF15O94989 841 aa11.55□□□□□ -0.56
NCKIPSD-202ENST00000413374 ATG7O95352 703 aa11.55□□□□□ -0.56
NCKIPSD-202ENST00000413374 PARNO95453 639 aaKnown RBP11.55□□□□□ -0.56
NCKIPSD-202ENST00000413374 CHRNA1P02708 482 aa11.55□□□□□ -0.56
NCKIPSD-202ENST00000413374 CA3P07451 260 aa11.55□□□□□ -0.56
NCKIPSD-202ENST00000413374 IGFBP4P22692 258 aa11.55□□□□□ -0.56
NCKIPSD-202ENST00000413374 TMEM62Q0P6H9 643 aa11.55□□□□□ -0.56
NCKIPSD-202ENST00000413374 MIS18BP1Q6P0N0 1132 aa11.55□□□□□ -0.56
NCKIPSD-202ENST00000413374 PLPPR4Q7Z2D5 763 aa11.55□□□□□ -0.56
NCKIPSD-202ENST00000413374 CCDC60Q8IWA6 550 aaPredicted RBP11.55□□□□□ -0.56
NCKIPSD-202ENST00000413374 CKAP2LQ8IYA6 745 aa11.55□□□□□ -0.56
NCKIPSD-202ENST00000413374 MAFAQ8NHW3 353 aaPredicted RBP11.55□□□□□ -0.56
NCKIPSD-202ENST00000413374 PHOSPHO2Q8TCD6 241 aa11.55□□□□□ -0.56
NCKIPSD-202ENST00000413374 SLC9A7Q96T83 725 aa11.55□□□□□ -0.56
NCKIPSD-202ENST00000413374 ZNF302Q9NR11 478 aa11.55□□□□□ -0.56
NCKIPSD-202ENST00000413374 ORC3Q9UBD5 711 aaPredicted RBP11.55□□□□□ -0.56
NCKIPSD-202ENST00000413374 TUBE1Q9UJT0 475 aa11.55□□□□□ -0.56
NCKIPSD-202ENST00000413374 SAMM50Q9Y512 469 aa11.55□□□□□ -0.56
NCKIPSD-202ENST00000413374 ABHD14A-ACY1A0A1B0GW23 586 aa11.54□□□□□ -0.56
NCKIPSD-202ENST00000413374 POTEB3A0JP26 581 aa11.54□□□□□ -0.56
NCKIPSD-202ENST00000413374 LCHNA4D1U4 455 aa11.54□□□□□ -0.56
NCKIPSD-202ENST00000413374 RRN3P2A6NIE6 340 aa11.54□□□□□ -0.56
NCKIPSD-202ENST00000413374 MSH4O15457 936 aa11.54□□□□□ -0.56
NCKIPSD-202ENST00000413374 CHMP2AO43633 222 aa11.54□□□□□ -0.56
NCKIPSD-202ENST00000413374 BAIAP3O94812 1187 aa11.54□□□□□ -0.56
NCKIPSD-202ENST00000413374 UPP2O95045 317 aa11.54□□□□□ -0.56
NCKIPSD-202ENST00000413374 TDP2O95551 362 aa11.54□□□□□ -0.56
NCKIPSD-202ENST00000413374 GHRP10912 638 aa11.54□□□□□ -0.56
NCKIPSD-202ENST00000413374 ATP4AP20648 1035 aa11.54□□□□□ -0.56
NCKIPSD-202ENST00000413374 CIITAP33076 1130 aa11.54□□□□□ -0.56
NCKIPSD-202ENST00000413374 ADGRE1Q14246 886 aa11.54□□□□□ -0.56
NCKIPSD-202ENST00000413374 NPY5RQ15761 445 aa11.54□□□□□ -0.56
NCKIPSD-202ENST00000413374 CCDC85BQ15834 202 aaPredicted RBP11.54□□□□□ -0.56
NCKIPSD-202ENST00000413374 INF2Q27J81 1249 aa11.54□□□□□ -0.56
NCKIPSD-202ENST00000413374 FAM160B1Q5W0V3 765 aa11.54□□□□□ -0.56
NCKIPSD-202ENST00000413374 PDXDC2PQ6P474 469 aa11.54□□□□□ -0.56
NCKIPSD-202ENST00000413374 POTEBQ6S5H4 581 aa11.54□□□□□ -0.56
NCKIPSD-202ENST00000413374 SPRED2Q7Z698 418 aa11.54□□□□□ -0.56
NCKIPSD-202ENST00000413374 OXER1Q8TDS5 423 aa11.54□□□□□ -0.56
NCKIPSD-202ENST00000413374 GAS2L1Q99501 681 aaPredicted RBP11.54□□□□□ -0.56
NCKIPSD-202ENST00000413374 TBC1D22BQ9NU19 505 aa11.54□□□□□ -0.56
NCKIPSD-202ENST00000413374 TCEAL9Q9UHQ7 104 aa11.54□□□□□ -0.56
NCKIPSD-202ENST00000413374 EMSYQ7Z589 1322 aa11.54□□□□□ -0.56
NCKIPSD-202ENST00000413374 MYH7BA7E2Y1 1941 aa11.53□□□□□ -0.56
NCKIPSD-202ENST00000413374 LAMA2P24043 3122 aaKnown RBP11.53□□□□□ -0.56
NCKIPSD-202ENST00000413374 IGKV6D-21A0A0A0MT36 114 aa11.53□□□□□ -0.56
NCKIPSD-202ENST00000413374 M0R2N6 131 aa11.53□□□□□ -0.56
NCKIPSD-202ENST00000413374 JAK2O60674 1132 aa11.53□□□□□ -0.56
NCKIPSD-202ENST00000413374 EIF5BO60841 1220 aaKnown RBP11.53□□□□□ -0.56
NCKIPSD-202ENST00000413374 FDPSP14324 419 aaKnown RBP11.53□□□□□ -0.56
NCKIPSD-202ENST00000413374 KLRC1P26715 233 aa11.53□□□□□ -0.56
NCKIPSD-202ENST00000413374 USP11P51784 963 aa11.53□□□□□ -0.56
NCKIPSD-202ENST00000413374 SETQ01105 290 aaPredicted RBP11.53□□□□□ -0.56
NCKIPSD-202ENST00000413374 NONOQ15233 471 aaKnown RBP eCLIP11.53□□□□□ -0.56
NCKIPSD-202ENST00000413374 LETM2Q2VYF4 491 aa11.53□□□□□ -0.56
NCKIPSD-202ENST00000413374 PLEKHG4Q58EX7 1191 aa11.53□□□□□ -0.56
NCKIPSD-202ENST00000413374 RSPH3Q86UC2 560 aa11.53□□□□□ -0.56
NCKIPSD-202ENST00000413374 MYOCDQ8IZQ8 938 aa11.53□□□□□ -0.56
NCKIPSD-202ENST00000413374 ARNTL2Q8WYA1 636 aa11.53□□□□□ -0.56
NCKIPSD-202ENST00000413374 SEPT8Q92599 483 aa11.53□□□□□ -0.56
NCKIPSD-202ENST00000413374 LENG9Q96B70 501 aa11.53□□□□□ -0.56
NCKIPSD-202ENST00000413374 PHF20Q9BVI0 1012 aa11.53□□□□□ -0.56
NCKIPSD-202ENST00000413374 GABBR1Q9UBS5 961 aa11.53□□□□□ -0.56
NCKIPSD-202ENST00000413374 CDY2AQ9Y6F7 541 aa11.53□□□□□ -0.56
NCKIPSD-202ENST00000413374 MBLAC1A4D2B0 266 aaPredicted RBP11.52□□□□□ -0.57
NCKIPSD-202ENST00000413374 HBP1O60381 514 aa11.52□□□□□ -0.57
NCKIPSD-202ENST00000413374 PSAPP07602 524 aa11.52□□□□□ -0.57
NCKIPSD-202ENST00000413374 XBP1P17861 261 aa11.52□□□□□ -0.57
NCKIPSD-202ENST00000413374 IBSPP21815 317 aaPredicted RBP11.52□□□□□ -0.57
NCKIPSD-202ENST00000413374 MGAT3Q09327 533 aa11.52□□□□□ -0.57
NCKIPSD-202ENST00000413374 C8orf34Q49A92 452 aa11.52□□□□□ -0.57
NCKIPSD-202ENST00000413374 FAM26DQ5JW98 314 aa11.52□□□□□ -0.57
NCKIPSD-202ENST00000413374 ZNF746Q6NUN9 644 aaPredicted RBP11.52□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms