RNA–Protein interactions for RNA: ENST00000412913.1

SMARCAL1-204, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a like 1, humanhuman

TSL 4

Gene SMARCAL1, Length 538 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAL1-204ENST00000412913 CTAGE5O15320 804 aa11.84□□□□□ -0.51
SMARCAL1-204ENST00000412913 ZNF862O60290 1169 aa11.84□□□□□ -0.51
SMARCAL1-204ENST00000412913 LGR5O75473 907 aa11.84□□□□□ -0.51
SMARCAL1-204ENST00000412913 STBD1O95210 358 aa11.84□□□□□ -0.51
SMARCAL1-204ENST00000412913 LYPLA2O95372 231 aa11.84□□□□□ -0.51
SMARCAL1-204ENST00000412913 PRKAR2AP13861 404 aaKnown RBP11.84□□□□□ -0.51
SMARCAL1-204ENST00000412913 AKR1A1P14550 325 aa11.84□□□□□ -0.51
SMARCAL1-204ENST00000412913 MUTP22033 750 aa11.84□□□□□ -0.51
SMARCAL1-204ENST00000412913 CCND3P30281 292 aaPredicted RBP11.84□□□□□ -0.51
SMARCAL1-204ENST00000412913 TNFAIP2Q03169 654 aa11.84□□□□□ -0.51
SMARCAL1-204ENST00000412913 CTTNQ14247 550 aaKnown RBP11.84□□□□□ -0.51
SMARCAL1-204ENST00000412913 SH3RF1Q7Z6J0 888 aa11.84□□□□□ -0.51
SMARCAL1-204ENST00000412913 TLK2Q86UE8 772 aa11.84□□□□□ -0.51
SMARCAL1-204ENST00000412913 DHX37Q8IY37 1157 aaKnown RBP11.84□□□□□ -0.51
SMARCAL1-204ENST00000412913 SLAIN1Q8ND83 568 aa11.84□□□□□ -0.51
SMARCAL1-204ENST00000412913 PPTC7Q8NI37 304 aa11.84□□□□□ -0.51
SMARCAL1-204ENST00000412913 ERMNQ8TAM6 284 aa11.84□□□□□ -0.51
SMARCAL1-204ENST00000412913 RAET1EQ8TD07 263 aa11.84□□□□□ -0.51
SMARCAL1-204ENST00000412913 TIGD1Q96MW7 591 aa11.84□□□□□ -0.51
SMARCAL1-204ENST00000412913 PLIN2Q99541 437 aa11.84□□□□□ -0.51
SMARCAL1-204ENST00000412913 PANK2Q9BZ23 570 aa11.84□□□□□ -0.51
SMARCAL1-204ENST00000412913 NT5C3AQ9H0P0 336 aa11.84□□□□□ -0.51
SMARCAL1-204ENST00000412913 PTPN22Q9Y2R2 807 aa11.84□□□□□ -0.51
SMARCAL1-204ENST00000412913 PCDHA10Q9Y5I2 948 aa11.84□□□□□ -0.51
SMARCAL1-204ENST00000412913 STK24Q9Y6E0 443 aa11.84□□□□□ -0.51
SMARCAL1-204ENST00000412913 SIP14410 1827 aa11.83□□□□□ -0.51
SMARCAL1-204ENST00000412913 SCN10AQ9Y5Y9 1956 aa11.83□□□□□ -0.52
SMARCAL1-204ENST00000412913 E9PMD0 336 aa11.83□□□□□ -0.52
SMARCAL1-204ENST00000412913 SEPT4O43236 478 aa11.83□□□□□ -0.52
SMARCAL1-204ENST00000412913 KINO60870 393 aaKnown RBP11.83□□□□□ -0.52
SMARCAL1-204ENST00000412913 INHAP05111 366 aa11.83□□□□□ -0.52
SMARCAL1-204ENST00000412913 P4HBP07237 508 aaKnown RBP11.83□□□□□ -0.52
SMARCAL1-204ENST00000412913 PSAPP07602 524 aa11.83□□□□□ -0.52
SMARCAL1-204ENST00000412913 MMP3P08254 477 aa11.83□□□□□ -0.52
SMARCAL1-204ENST00000412913 SLFN14P0C7P3 912 aa11.83□□□□□ -0.52
SMARCAL1-204ENST00000412913 PRR29P0C7W0 189 aa11.83□□□□□ -0.52
SMARCAL1-204ENST00000412913 ATP4AP20648 1035 aa11.83□□□□□ -0.52
SMARCAL1-204ENST00000412913 TCF7P36402 384 aaPredicted RBP11.83□□□□□ -0.52
SMARCAL1-204ENST00000412913 STAT6P42226 847 aa11.83□□□□□ -0.52
SMARCAL1-204ENST00000412913 PSMC6P62333 389 aa11.83□□□□□ -0.52
SMARCAL1-204ENST00000412913 IRX5P78411 483 aaPredicted RBP11.83□□□□□ -0.52
SMARCAL1-204ENST00000412913 ARHGEF6Q15052 776 aa11.83□□□□□ -0.52
SMARCAL1-204ENST00000412913 SKOR2Q2VWA4 1001 aaPredicted RBP11.83□□□□□ -0.52
SMARCAL1-204ENST00000412913 CAVIN1Q6NZI2 390 aaKnown RBP11.83□□□□□ -0.52
SMARCAL1-204ENST00000412913 RBM43Q6ZSC3 357 aaKnown RBP11.83□□□□□ -0.52
SMARCAL1-204ENST00000412913 GRAMD1CQ8IYS0 662 aa11.83□□□□□ -0.52
SMARCAL1-204ENST00000412913 OR6J1Q8NGC5 347 aa11.83□□□□□ -0.52
SMARCAL1-204ENST00000412913 AFAP1L1Q8TED9 768 aa11.83□□□□□ -0.52
SMARCAL1-204ENST00000412913 LARP4BQ92615 738 aaKnown RBP11.83□□□□□ -0.52
SMARCAL1-204ENST00000412913 RAD54LQ92698 747 aa11.83□□□□□ -0.52
SMARCAL1-204ENST00000412913 CALML4Q96GE6 196 aa11.83□□□□□ -0.52
SMARCAL1-204ENST00000412913 SPATA33Q96N06 139 aa11.83□□□□□ -0.52
SMARCAL1-204ENST00000412913 MLXIPQ9HAP2 919 aa11.83□□□□□ -0.52
SMARCAL1-204ENST00000412913 GABBR1Q9UBS5 961 aa11.83□□□□□ -0.52
SMARCAL1-204ENST00000412913 STK17AQ9UEE5 414 aa11.83□□□□□ -0.52
SMARCAL1-204ENST00000412913 CCDC39Q9UFE4 941 aa11.83□□□□□ -0.52
SMARCAL1-204ENST00000412913 USP25Q9UHP3 1055 aa11.83□□□□□ -0.52
SMARCAL1-204ENST00000412913 TCEAL9Q9UHQ7 104 aa11.83□□□□□ -0.52
SMARCAL1-204ENST00000412913 FAM184BQ9ULE4 1060 aa11.83□□□□□ -0.52
SMARCAL1-204ENST00000412913 KIAA1024Q9UPX6 916 aa11.83□□□□□ -0.52
SMARCAL1-204ENST00000412913 SAMM50Q9Y512 469 aa11.83□□□□□ -0.52
SMARCAL1-204ENST00000412913 MYH11P35749 1972 aa11.83□□□□□ -0.52
SMARCAL1-204ENST00000412913 SYNRGQ9UMZ2 1314 aa11.83□□□□□ -0.52
SMARCAL1-204ENST00000412913 MYADML2A6NDP7 307 aa11.82□□□□□ -0.52
SMARCAL1-204ENST00000412913 GRK4P32298 578 aa11.82□□□□□ -0.52
SMARCAL1-204ENST00000412913 QARSP47897 775 aaKnown RBP11.82□□□□□ -0.52
SMARCAL1-204ENST00000412913 NKX3-2P78367 333 aa11.82□□□□□ -0.52
SMARCAL1-204ENST00000412913 MDM2Q00987 491 aaPredicted RBP11.82□□□□□ -0.52
SMARCAL1-204ENST00000412913 LAMC2Q13753 1193 aa11.82□□□□□ -0.52
SMARCAL1-204ENST00000412913 ZRSR1Q15695 479 aaKnown RBP11.82□□□□□ -0.52
SMARCAL1-204ENST00000412913 CCDC183Q5T5S1 534 aa11.82□□□□□ -0.52
SMARCAL1-204ENST00000412913 RRAGBQ5VZM2 374 aa11.82□□□□□ -0.52
SMARCAL1-204ENST00000412913 MIS18BP1Q6P0N0 1132 aa11.82□□□□□ -0.52
SMARCAL1-204ENST00000412913 TRIM50Q86XT4 487 aa11.82□□□□□ -0.52
SMARCAL1-204ENST00000412913 C4orf19Q8IY42 314 aa11.82□□□□□ -0.52
SMARCAL1-204ENST00000412913 ELOA2Q8IYF1 753 aaPredicted RBP11.82□□□□□ -0.52
SMARCAL1-204ENST00000412913 IQUBQ8NA54 791 aa11.82□□□□□ -0.52
SMARCAL1-204ENST00000412913 CNNM3Q8NE01 707 aa11.82□□□□□ -0.52
SMARCAL1-204ENST00000412913 AFG1LQ8WV93 481 aa11.82□□□□□ -0.52
SMARCAL1-204ENST00000412913 SEPT1Q8WYJ6 367 aa11.82□□□□□ -0.52
SMARCAL1-204ENST00000412913 PYM1Q9BRP8 204 aaKnown RBP11.82□□□□□ -0.52
SMARCAL1-204ENST00000412913 UPF3AQ9H1J1 476 aaKnown RBP11.82□□□□□ -0.52
SMARCAL1-204ENST00000412913 NUP62CLQ9H1M0 184 aa11.82□□□□□ -0.52
SMARCAL1-204ENST00000412913 CUEDC2Q9H467 287 aa11.82□□□□□ -0.52
SMARCAL1-204ENST00000412913 MAGEF1Q9HAY2 307 aa11.82□□□□□ -0.52
SMARCAL1-204ENST00000412913 KBTBD4Q9NVX7 518 aa11.82□□□□□ -0.52
SMARCAL1-204ENST00000412913 Q9Y3F1 56 aa11.82□□□□□ -0.52
SMARCAL1-204ENST00000412913 MAFBQ9Y5Q3 323 aaPredicted RBP11.82□□□□□ -0.52
SMARCAL1-204ENST00000412913 CENPFP49454 3210 aa11.81□□□□□ -0.52
SMARCAL1-204ENST00000412913 A0A087WWV3 80 aa11.81□□□□□ -0.52
SMARCAL1-204ENST00000412913 TMEM150BA6NC51 233 aa11.81□□□□□ -0.52
SMARCAL1-204ENST00000412913 A6NJR5 290 aa11.81□□□□□ -0.52
SMARCAL1-204ENST00000412913 ZBTB39O15060 712 aa11.81□□□□□ -0.52
SMARCAL1-204ENST00000412913 ADAMTS4O75173 837 aa11.81□□□□□ -0.52
SMARCAL1-204ENST00000412913 DUSP11O75319 330 aaKnown RBP11.81□□□□□ -0.52
SMARCAL1-204ENST00000412913 LGALS2P05162 132 aa11.81□□□□□ -0.52
SMARCAL1-204ENST00000412913 CASP1P29466 404 aa11.81□□□□□ -0.52
SMARCAL1-204ENST00000412913 LBX1P52954 281 aa11.81□□□□□ -0.52
SMARCAL1-204ENST00000412913 SLC12A3P55017 1021 aa11.81□□□□□ -0.52
SMARCAL1-204ENST00000412913 PSMC5P62195 406 aa11.81□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms