RNA–Protein interactions for RNA: ENST00000412104.6

VRK2-202, Transcript of vaccinia related kinase 2, humanhuman

TSL 1 (best) BASIC

Gene VRK2, Length 1,916 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK2-202ENST00000412104 BCRP11274 1271 aa27.1■■□□□ 1.93
VRK2-202ENST00000412104 HOXD13P35453 343 aa27.1■■□□□ 1.93
VRK2-202ENST00000412104 EPHA7Q15375 998 aa27.1■■□□□ 1.93
VRK2-202ENST00000412104 BMT2Q1RMZ1 405 aa27.1■■□□□ 1.93
VRK2-202ENST00000412104 MUM1L1Q5H9M0 696 aa27.1■■□□□ 1.93
VRK2-202ENST00000412104 SLC35F6Q8N357 371 aa27.1■■□□□ 1.93
VRK2-202ENST00000412104 RIT2Q99578 217 aa27.1■■□□□ 1.93
VRK2-202ENST00000412104 HOMER2Q9NSB8 354 aa27.1■■□□□ 1.93
VRK2-202ENST00000412104 PLAGL2Q9UPG8 496 aa27.1■■□□□ 1.93
VRK2-202ENST00000412104 NR2F2P24468 414 aa27.1■■□□□ 1.93
VRK2-202ENST00000412104 USP14P54578 494 aa27.1■■□□□ 1.93
VRK2-202ENST00000412104 KRT83P78385 493 aa27.1■■□□□ 1.93
VRK2-202ENST00000412104 C1orf186Q6ZWK4 172 aa27.1■■□□□ 1.93
VRK2-202ENST00000412104 SCYL3Q8IZE3 742 aa27.1■■□□□ 1.93
VRK2-202ENST00000412104 SMCR8Q8TEV9 937 aaPredicted RBP27.1■■□□□ 1.93
VRK2-202ENST00000412104 BCAS3Q9H6U6 928 aa27.1■■□□□ 1.93
VRK2-202ENST00000412104 WRAP73Q9P2S5 460 aaPredicted RBP27.1■■□□□ 1.93
VRK2-202ENST00000412104 ZBTB39O15060 712 aa27.09■■□□□ 1.93
VRK2-202ENST00000412104 CETN3O15182 167 aa27.09■■□□□ 1.93
VRK2-202ENST00000412104 PRPF6O94906 941 aaKnown RBP27.09■■□□□ 1.93
VRK2-202ENST00000412104 GAP43P17677 238 aa27.09■■□□□ 1.93
VRK2-202ENST00000412104 KCNMA1Q12791 1236 aa27.09■■□□□ 1.93
VRK2-202ENST00000412104 POLD4Q9HCU8 107 aa27.09■■□□□ 1.93
VRK2-202ENST00000412104 OLFML3Q9NRN5 406 aa27.09■■□□□ 1.93
VRK2-202ENST00000412104 UTP18Q9Y5J1 556 aaKnown RBP eCLIP27.09■■□□□ 1.93
VRK2-202ENST00000412104 LOXHD1Q8IVV2 1947 aa27.09■■□□□ 1.93
VRK2-202ENST00000412104 FRMPD4Q14CM0 1322 aa27.09■■□□□ 1.93
VRK2-202ENST00000412104 PPP2R3AQ06190 1150 aa27.08■■□□□ 1.93
VRK2-202ENST00000412104 SPP2Q13103 211 aa27.08■■□□□ 1.93
VRK2-202ENST00000412104 NEK11Q8NG66 645 aa27.08■■□□□ 1.93
VRK2-202ENST00000412104 SYTL5Q8TDW5 730 aaPredicted RBP27.08■■□□□ 1.93
VRK2-202ENST00000412104 ARID3AQ99856 593 aa27.08■■□□□ 1.93
VRK2-202ENST00000412104 HAUS4Q9H6D7 363 aa27.08■■□□□ 1.93
VRK2-202ENST00000412104 KCNH7Q9NS40 1196 aa27.08■■□□□ 1.93
VRK2-202ENST00000412104 TRIM10Q9UDY6 481 aa27.08■■□□□ 1.93
VRK2-202ENST00000412104 EFCAB8A8MWE9 144 aa27.08■■□□□ 1.93
VRK2-202ENST00000412104 EIF3CLB5ME19 914 aaKnown RBP27.08■■□□□ 1.93
VRK2-202ENST00000412104 PDXKO00764 312 aa27.08■■□□□ 1.93
VRK2-202ENST00000412104 NIPA1Q7RTP0 329 aa27.08■■□□□ 1.93
VRK2-202ENST00000412104 BAP1Q92560 729 aa27.08■■□□□ 1.93
VRK2-202ENST00000412104 NACC1Q96RE7 527 aa27.08■■□□□ 1.93
VRK2-202ENST00000412104 EIF3CQ99613 913 aaKnown RBP27.08■■□□□ 1.93
VRK2-202ENST00000412104 LXNQ9BS40 222 aa27.08■■□□□ 1.93
VRK2-202ENST00000412104 ZNF112Q9UJU3 913 aa27.08■■□□□ 1.93
VRK2-202ENST00000412104 CTAGE9A4FU28 777 aa27.07■■□□□ 1.92
VRK2-202ENST00000412104 CALUO43852 315 aaPredicted RBP27.07■■□□□ 1.92
VRK2-202ENST00000412104 FAM13AO94988 1023 aa27.07■■□□□ 1.92
VRK2-202ENST00000412104 GCNT3O95395 438 aa27.07■■□□□ 1.92
VRK2-202ENST00000412104 ANGEL2Q5VTE6 544 aaKnown RBP27.07■■□□□ 1.92
VRK2-202ENST00000412104 PCNX4Q63HM2 1172 aa27.07■■□□□ 1.92
VRK2-202ENST00000412104 UBXN4Q92575 508 aa27.07■■□□□ 1.92
VRK2-202ENST00000412104 MAP3K20Q9NYL2 800 aaKnown RBP27.07■■□□□ 1.92
VRK2-202ENST00000412104 FAM184BQ9ULE4 1060 aa27.07■■□□□ 1.92
VRK2-202ENST00000412104 GUCA1BQ9UMX6 200 aa27.07■■□□□ 1.92
VRK2-202ENST00000412104 CTDP1Q9Y5B0 961 aaPredicted RBP27.07■■□□□ 1.92
VRK2-202ENST00000412104 LRRC53A6NM62 1247 aa27.06■■□□□ 1.92
VRK2-202ENST00000412104 DDX39AO00148 427 aaKnown RBP27.06■■□□□ 1.92
VRK2-202ENST00000412104 ZNF662Q6ZS27 426 aa27.06■■□□□ 1.92
VRK2-202ENST00000412104 APOBEC3FQ8IUX4 373 aaKnown RBP27.06■■□□□ 1.92
VRK2-202ENST00000412104 ZKSCAN4Q969J2 545 aaPredicted RBP27.06■■□□□ 1.92
VRK2-202ENST00000412104 WRNIP1Q96S55 665 aa27.06■■□□□ 1.92
VRK2-202ENST00000412104 EDEM3Q9BZQ6 932 aa27.06■■□□□ 1.92
VRK2-202ENST00000412104 TYW1Q9NV66 732 aaKnown RBP27.06■■□□□ 1.92
VRK2-202ENST00000412104 PKD2L1Q9P0L9 805 aa27.06■■□□□ 1.92
VRK2-202ENST00000412104 UBIAD1Q9Y5Z9 338 aa27.06■■□□□ 1.92
VRK2-202ENST00000412104 ASTN1O14525 1302 aa27.06■■□□□ 1.92
VRK2-202ENST00000412104 ZBED4O75132 1171 aa27.06■■□□□ 1.92
VRK2-202ENST00000412104 IPO7O95373 1038 aaKnown RBP27.06■■□□□ 1.92
VRK2-202ENST00000412104 PLEKP08567 350 aaPredicted RBP27.06■■□□□ 1.92
VRK2-202ENST00000412104 BACE1P56817 501 aa27.06■■□□□ 1.92
VRK2-202ENST00000412104 TKFCQ3LXA3 575 aa27.06■■□□□ 1.92
VRK2-202ENST00000412104 FBXO38Q6PIJ6 1188 aa27.06■■□□□ 1.92
VRK2-202ENST00000412104 RRAGAQ7L523 313 aa27.06■■□□□ 1.92
VRK2-202ENST00000412104 KIAA1328Q86T90 577 aa27.06■■□□□ 1.92
VRK2-202ENST00000412104 SAMD3Q8N6K7 520 aa27.06■■□□□ 1.92
VRK2-202ENST00000412104 BANK1Q8NDB2 785 aa27.06■■□□□ 1.92
VRK2-202ENST00000412104 NLGN2Q8NFZ4 835 aa27.06■■□□□ 1.92
VRK2-202ENST00000412104 NEK9Q8TD19 979 aa27.06■■□□□ 1.92
VRK2-202ENST00000412104 CCDC94Q9BW85 323 aaPredicted RBP27.06■■□□□ 1.92
VRK2-202ENST00000412104 AS3MTQ9HBK9 375 aa27.06■■□□□ 1.92
VRK2-202ENST00000412104 SFI1A8K8P3 1242 aa27.05■■□□□ 1.92
VRK2-202ENST00000412104 PTPRAP18433 802 aa27.05■■□□□ 1.92
VRK2-202ENST00000412104 RPS6P62753 249 aaKnown RBP27.05■■□□□ 1.92
VRK2-202ENST00000412104 MRPS9P82933 396 aaKnown RBP27.05■■□□□ 1.92
VRK2-202ENST00000412104 PRAMEF18Q5VWM3 479 aa27.05■■□□□ 1.92
VRK2-202ENST00000412104 NAPGQ99747 312 aaPredicted RBP27.05■■□□□ 1.92
VRK2-202ENST00000412104 ARHGAP20Q9P2F6 1191 aa27.05■■□□□ 1.92
VRK2-202ENST00000412104 TFR2Q9UP52 801 aa27.05■■□□□ 1.92
VRK2-202ENST00000412104 CCDC122Q5T0U0 273 aa27.04■■□□□ 1.92
VRK2-202ENST00000412104 PDXDC1Q6P996 788 aa27.04■■□□□ 1.92
VRK2-202ENST00000412104 CACNA2D4Q7Z3S7 1137 aa27.04■■□□□ 1.92
VRK2-202ENST00000412104 MYCT1Q8N699 235 aa27.04■■□□□ 1.92
VRK2-202ENST00000412104 ZNF280CQ8ND82 737 aa27.04■■□□□ 1.92
VRK2-202ENST00000412104 TRPM4Q8TD43 1214 aa27.04■■□□□ 1.92
VRK2-202ENST00000412104 CCDC42Q96M95 316 aa27.04■■□□□ 1.92
VRK2-202ENST00000412104 TAAR1Q96RJ0 339 aa27.04■■□□□ 1.92
VRK2-202ENST00000412104 PARVGQ9HBI0 331 aa27.04■■□□□ 1.92
VRK2-202ENST00000412104 AGO4Q9HCK5 861 aaKnown RBP27.04■■□□□ 1.92
VRK2-202ENST00000412104 PICK1Q9NRD5 415 aa27.04■■□□□ 1.92
VRK2-202ENST00000412104 KCND2Q9NZV8 630 aa27.04■■□□□ 1.92
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms