RNA–Protein interactions for RNA: ENST00000411827.1

CDC42-204, Transcript of cell division cycle 42, humanhuman

TSL 3

Gene CDC42, Length 597 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42-204ENST00000411827 KANK3Q6NY19 840 aa20.9■□□□□ 0.94
CDC42-204ENST00000411827 C4orf19Q8IY42 314 aa20.9■□□□□ 0.94
CDC42-204ENST00000411827 ARMC5Q96C12 935 aa20.9■□□□□ 0.94
CDC42-204ENST00000411827 EPSTI1Q96J88 318 aa20.9■□□□□ 0.94
CDC42-204ENST00000411827 FAM167AQ96KS9 214 aa20.9■□□□□ 0.94
CDC42-204ENST00000411827 NACC1Q96RE7 527 aa20.9■□□□□ 0.94
CDC42-204ENST00000411827 UIMC1Q96RL1 719 aa20.9■□□□□ 0.94
CDC42-204ENST00000411827 ZNF215Q9UL58 517 aaPredicted RBP20.9■□□□□ 0.94
CDC42-204ENST00000411827 PPME1Q9Y570 386 aa20.9■□□□□ 0.94
CDC42-204ENST00000411827 GSTTP1A0A1W2PQM5 241 aa20.89■□□□□ 0.93
CDC42-204ENST00000411827 BACH1O14867 736 aa20.89■□□□□ 0.93
CDC42-204ENST00000411827 SLITRK3O94933 977 aa20.89■□□□□ 0.93
CDC42-204ENST00000411827 PFKFB1P16118 471 aa20.89■□□□□ 0.93
CDC42-204ENST00000411827 CST5P28325 142 aaPredicted RBP20.89■□□□□ 0.93
CDC42-204ENST00000411827 TRIM32Q13049 653 aa20.89■□□□□ 0.93
CDC42-204ENST00000411827 FSCN1Q16658 493 aaKnown RBP20.89■□□□□ 0.93
CDC42-204ENST00000411827 OTUD6AQ7L8S5 288 aa20.89■□□□□ 0.93
CDC42-204ENST00000411827 CATSPER3Q86XQ3 398 aa20.89■□□□□ 0.93
CDC42-204ENST00000411827 PCSK9Q8NBP7 692 aaKnown RBP20.89■□□□□ 0.93
CDC42-204ENST00000411827 ARRDC4Q8NCT1 418 aa20.89■□□□□ 0.93
CDC42-204ENST00000411827 AFG1LQ8WV93 481 aa20.89■□□□□ 0.93
CDC42-204ENST00000411827 TIGD1Q96MW7 591 aa20.89■□□□□ 0.93
CDC42-204ENST00000411827 MMTAG2Q9BU76 263 aaKnown RBP20.89■□□□□ 0.93
CDC42-204ENST00000411827 LRRC27Q9C0I9 530 aa20.89■□□□□ 0.93
CDC42-204ENST00000411827 XPNPEP3Q9NQH7 507 aa20.89■□□□□ 0.93
CDC42-204ENST00000411827 ZNF302Q9NR11 478 aa20.89■□□□□ 0.93
CDC42-204ENST00000411827 HOOK1Q9UJC3 728 aaKnown RBP20.89■□□□□ 0.93
CDC42-204ENST00000411827 DNM3Q9UQ16 869 aa20.89■□□□□ 0.93
CDC42-204ENST00000411827 MAFBQ9Y5Q3 323 aaPredicted RBP20.89■□□□□ 0.93
CDC42-204ENST00000411827 SPATA31C1P0DKV0 1188 aa20.88■□□□□ 0.93
CDC42-204ENST00000411827 CCND3P30281 292 aaPredicted RBP20.88■□□□□ 0.93
CDC42-204ENST00000411827 STAT5BP51692 787 aa20.88■□□□□ 0.93
CDC42-204ENST00000411827 SWSAP1Q6NVH7 229 aa20.88■□□□□ 0.93
CDC42-204ENST00000411827 RNF180Q86T96 592 aa20.88■□□□□ 0.93
CDC42-204ENST00000411827 ELOA2Q8IYF1 753 aaPredicted RBP20.88■□□□□ 0.93
CDC42-204ENST00000411827 COPS5Q92905 334 aa20.88■□□□□ 0.93
CDC42-204ENST00000411827 LXNQ9BS40 222 aa20.88■□□□□ 0.93
CDC42-204ENST00000411827 XRN2Q9H0D6 950 aaKnown RBP eCLIP20.88■□□□□ 0.933e-9■■■■■ 29.1
CDC42-204ENST00000411827 ERAP1Q9NZ08 941 aa20.88■□□□□ 0.93
CDC42-204ENST00000411827 IGSF9BQ9UPX0 1349 aa20.87■□□□□ 0.93
CDC42-204ENST00000411827 A0A1B0GVL5 298 aa20.87■□□□□ 0.93
CDC42-204ENST00000411827 PP2D1A8MPX8 630 aa20.87■□□□□ 0.93
CDC42-204ENST00000411827 KINO60870 393 aaKnown RBP20.87■□□□□ 0.93
CDC42-204ENST00000411827 GADD45BO75293 160 aaPredicted RBP20.87■□□□□ 0.93
CDC42-204ENST00000411827 MMP3P08254 477 aa20.87■□□□□ 0.93
CDC42-204ENST00000411827 SP4Q02446 784 aa20.87■□□□□ 0.93
CDC42-204ENST00000411827 TMEM119Q4V9L6 283 aa20.87■□□□□ 0.93
CDC42-204ENST00000411827 XKR3Q5GH77 459 aa20.87■□□□□ 0.93
CDC42-204ENST00000411827 SPECC1Q5M775 1068 aa20.87■□□□□ 0.93
CDC42-204ENST00000411827 TPH2Q8IWU9 490 aa20.87■□□□□ 0.93
CDC42-204ENST00000411827 EXOC8Q8IYI6 725 aa20.87■□□□□ 0.93
CDC42-204ENST00000411827 SH3TC2Q8TF17 1288 aa20.87■□□□□ 0.93
CDC42-204ENST00000411827 GLG1Q92896 1179 aa20.87■□□□□ 0.93
CDC42-204ENST00000411827 DYDC2Q96IM9 177 aa20.87■□□□□ 0.93
CDC42-204ENST00000411827 TSEN34Q9BSV6 310 aaKnown RBP20.87■□□□□ 0.93
CDC42-204ENST00000411827 KATNAL1Q9BW62 490 aa20.87■□□□□ 0.93
CDC42-204ENST00000411827 BCAS3Q9H6U6 928 aa20.87■□□□□ 0.93
CDC42-204ENST00000411827 PAK6Q9NQU5 681 aaPredicted RBP20.87■□□□□ 0.93
CDC42-204ENST00000411827 NRBP2Q9NSY0 501 aa20.87■□□□□ 0.93
CDC42-204ENST00000411827 ANKEF1Q9NU02 776 aa20.87■□□□□ 0.93
CDC42-204ENST00000411827 DDX19AQ9NUU7 478 aaKnown RBP20.87■□□□□ 0.93
CDC42-204ENST00000411827 GABBR1Q9UBS5 961 aa20.87■□□□□ 0.93
CDC42-204ENST00000411827 POLR2DO15514 142 aaKnown RBP20.86■□□□□ 0.93
CDC42-204ENST00000411827 ADCY6O43306 1168 aa20.86■□□□□ 0.93
CDC42-204ENST00000411827 CABYRO75952 493 aa20.86■□□□□ 0.93
CDC42-204ENST00000411827 MYL1P05976 194 aa20.86■□□□□ 0.93
CDC42-204ENST00000411827 SLFN14P0C7P3 912 aa20.86■□□□□ 0.93
CDC42-204ENST00000411827 CDC25AP30304 524 aa20.86■□□□□ 0.93
CDC42-204ENST00000411827 STAT6P42226 847 aa20.86■□□□□ 0.93
CDC42-204ENST00000411827 NDUFA8P51970 172 aa20.86■□□□□ 0.93
CDC42-204ENST00000411827 AMPD3Q01432 767 aa20.86■□□□□ 0.93
CDC42-204ENST00000411827 NFKBIBQ15653 356 aa20.86■□□□□ 0.93
CDC42-204ENST00000411827 PDXDC2PQ6P474 469 aa20.86■□□□□ 0.93
CDC42-204ENST00000411827 USP49Q70CQ1 688 aa20.86■□□□□ 0.93
CDC42-204ENST00000411827 CEP57L1Q8IYX8 460 aa20.86■□□□□ 0.93
CDC42-204ENST00000411827 FMR1NBQ8N0W7 255 aaPredicted RBP20.86■□□□□ 0.93
CDC42-204ENST00000411827 ENGASEQ8NFI3 743 aa20.86■□□□□ 0.93
CDC42-204ENST00000411827 ABHD8Q96I13 439 aa20.86■□□□□ 0.93
CDC42-204ENST00000411827 RGL1Q9NZL6 768 aa20.86■□□□□ 0.93
CDC42-204ENST00000411827 DBR1Q9UK59 544 aaKnown RBP20.86■□□□□ 0.93
CDC42-204ENST00000411827 KIAA1024Q9UPX6 916 aa20.86■□□□□ 0.93
CDC42-204ENST00000411827 SYNRGQ9UMZ2 1314 aa20.85■□□□□ 0.93
CDC42-204ENST00000411827 MED24O75448 989 aa20.85■□□□□ 0.93
CDC42-204ENST00000411827 ZNF202O95125 648 aa20.85■□□□□ 0.93
CDC42-204ENST00000411827 C6orf222P0C671 652 aaPredicted RBP20.85■□□□□ 0.93
CDC42-204ENST00000411827 CYP4A11Q02928 519 aa20.85■□□□□ 0.93
CDC42-204ENST00000411827 GRB10Q13322 594 aa20.85■□□□□ 0.93
CDC42-204ENST00000411827 KARSQ15046 597 aaKnown RBP20.85■□□□□ 0.93
CDC42-204ENST00000411827 GNASQ5JWF2 1037 aa20.85■□□□□ 0.93
CDC42-204ENST00000411827 GJC2Q5T442 439 aaPredicted RBP20.85■□□□□ 0.93
CDC42-204ENST00000411827 CCDC60Q8IWA6 550 aaPredicted RBP20.85■□□□□ 0.93
CDC42-204ENST00000411827 SYAP1Q96A49 352 aaPredicted RBP20.85■□□□□ 0.93
CDC42-204ENST00000411827 ZNF333Q96JL9 665 aa20.85■□□□□ 0.93
CDC42-204ENST00000411827 SEZ6LQ9BYH1 1024 aa20.85■□□□□ 0.93
CDC42-204ENST00000411827 KCND2Q9NZV8 630 aa20.85■□□□□ 0.93
CDC42-204ENST00000411827 POTEB3A0JP26 581 aa20.84■□□□□ 0.93
CDC42-204ENST00000411827 ADAMTS4O75173 837 aa20.84■□□□□ 0.93
CDC42-204ENST00000411827 EYA4O95677 639 aa20.84■□□□□ 0.93
CDC42-204ENST00000411827 LGALS2P05162 132 aa20.84■□□□□ 0.93
CDC42-204ENST00000411827 CCL5P13501 91 aa20.84■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 150.8 ms