RNA–Protein interactions for RNA: ENST00000411243.1

RNU4-61P-201, Transcript of RNA, U4 small nuclear 61, pseudogene, humanhuman

BASIC

Gene RNU4-61P, Length 107 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-61P-201ENST00000411243 MYOTQ9UBF9 498 aa3.39□□□□□ -1.87
RNU4-61P-201ENST00000411243 RBMXL2O75526 392 aaKnown RBP3.38□□□□□ -1.87
RNU4-61P-201ENST00000411243 IL18BPO95998 194 aa3.38□□□□□ -1.87
RNU4-61P-201ENST00000411243 MAN2A2P49641 1150 aa3.38□□□□□ -1.87
RNU4-61P-201ENST00000411243 RPL11P62913 178 aaKnown RBP3.38□□□□□ -1.87
RNU4-61P-201ENST00000411243 Q6YL49 198 aa3.38□□□□□ -1.87
RNU4-61P-201ENST00000411243 GK5Q6ZS86 529 aa3.38□□□□□ -1.87
RNU4-61P-201ENST00000411243 CEP68Q76N32 757 aa3.38□□□□□ -1.87
RNU4-61P-201ENST00000411243 PHOSPHO1Q8TCT1 267 aa3.38□□□□□ -1.87
RNU4-61P-201ENST00000411243 TRMT2BQ96GJ1 504 aaKnown RBP3.38□□□□□ -1.87
RNU4-61P-201ENST00000411243 ASB16Q96NS5 453 aa3.38□□□□□ -1.87
RNU4-61P-201ENST00000411243 FAM86C1Q9NVL1 165 aa3.38□□□□□ -1.87
RNU4-61P-201ENST00000411243 TRPS1Q9UHF7 1281 aa3.38□□□□□ -1.87
RNU4-61P-201ENST00000411243 COA3Q9Y2R0 106 aaPredicted RBP3.38□□□□□ -1.87
RNU4-61P-201ENST00000411243 USP31Q70CQ4 1352 aa3.38□□□□□ -1.87
RNU4-61P-201ENST00000411243 PPFIA4O75335 1185 aa3.37□□□□□ -1.87
RNU4-61P-201ENST00000411243 PRPF40AO75400 957 aaKnown RBP3.37□□□□□ -1.87
RNU4-61P-201ENST00000411243 NR4A1P22736 598 aa3.37□□□□□ -1.87
RNU4-61P-201ENST00000411243 CRKP46108 304 aa3.37□□□□□ -1.87
RNU4-61P-201ENST00000411243 COPS5Q92905 334 aa3.37□□□□□ -1.87
RNU4-61P-201ENST00000411243 RNF34Q969K3 372 aa3.37□□□□□ -1.87
RNU4-61P-201ENST00000411243 CGGBP1Q9UFW8 167 aaPredicted RBP3.37□□□□□ -1.87
RNU4-61P-201ENST00000411243 SH3BP1Q9Y3L3 701 aa3.37□□□□□ -1.87
RNU4-61P-201ENST00000411243 PMS2P1A4D2B8 440 aa3.36□□□□□ -1.87
RNU4-61P-201ENST00000411243 GREM1O60565 184 aa3.36□□□□□ -1.87
RNU4-61P-201ENST00000411243 PTH2RP49190 550 aa3.36□□□□□ -1.87
RNU4-61P-201ENST00000411243 NHLH1Q02575 133 aa3.36□□□□□ -1.87
RNU4-61P-201ENST00000411243 RABL3Q5HYI8 236 aa3.36□□□□□ -1.87
RNU4-61P-201ENST00000411243 ZNF425Q6IV72 752 aa3.36□□□□□ -1.87
RNU4-61P-201ENST00000411243 FBXL19Q6PCT2 694 aa3.36□□□□□ -1.87
RNU4-61P-201ENST00000411243 TAB3Q8N5C8 712 aaPredicted RBP3.36□□□□□ -1.87
RNU4-61P-201ENST00000411243 KIAA1683Q9H0B3 1180 aa3.36□□□□□ -1.87
RNU4-61P-201ENST00000411243 AGO3Q9H9G7 860 aaKnown RBP3.36□□□□□ -1.87
RNU4-61P-201ENST00000411243 CYP4F11Q9HBI6 524 aa3.36□□□□□ -1.87
RNU4-61P-201ENST00000411243 RNF19AQ9NV58 838 aa3.36□□□□□ -1.87
RNU4-61P-201ENST00000411243 ZNF70Q9UC06 446 aaPredicted RBP3.36□□□□□ -1.87
RNU4-61P-201ENST00000411243 ZNF580Q9UK33 172 aa3.36□□□□□ -1.87
RNU4-61P-201ENST00000411243 TIMM13Q9Y5L4 95 aaPredicted RBP3.36□□□□□ -1.87
RNU4-61P-201ENST00000411243 ESYT3A0FGR9 886 aa3.35□□□□□ -1.87
RNU4-61P-201ENST00000411243 MINDY4BA8MYZ0 360 aa3.35□□□□□ -1.87
RNU4-61P-201ENST00000411243 RUSC1-AS1Q66K80 236 aa3.35□□□□□ -1.87
RNU4-61P-201ENST00000411243 USP30Q70CQ3 517 aa3.35□□□□□ -1.87
RNU4-61P-201ENST00000411243 SHCBP1Q8NEM2 672 aa3.35□□□□□ -1.87
RNU4-61P-201ENST00000411243 MIEF2Q96C03 454 aa3.35□□□□□ -1.87
RNU4-61P-201ENST00000411243 TACO1Q9BSH4 297 aaKnown RBP3.35□□□□□ -1.87
RNU4-61P-201ENST00000411243 SLC26A4O43511 780 aa3.34□□□□□ -1.87
RNU4-61P-201ENST00000411243 GTF2A2P52657 109 aa3.34□□□□□ -1.87
RNU4-61P-201ENST00000411243 ARHGEF39Q8N4T4 335 aa3.34□□□□□ -1.87
RNU4-61P-201ENST00000411243 ZBTB9Q96C00 473 aa3.34□□□□□ -1.87
RNU4-61P-201ENST00000411243 TMEM169Q96HH4 297 aa3.34□□□□□ -1.87
RNU4-61P-201ENST00000411243 C16orf92Q96LL3 132 aa3.34□□□□□ -1.87
RNU4-61P-201ENST00000411243 HAUS7Q99871 368 aa3.34□□□□□ -1.87
RNU4-61P-201ENST00000411243 KLHL25Q9H0H3 589 aa3.34□□□□□ -1.87
RNU4-61P-201ENST00000411243 SMOC1Q9H4F8 434 aa3.34□□□□□ -1.87
RNU4-61P-201ENST00000411243 GPRC5CQ9NQ84 441 aa3.34□□□□□ -1.87
RNU4-61P-201ENST00000411243 SUPT16HQ9Y5B9 1047 aaKnown RBP3.34□□□□□ -1.87
RNU4-61P-201ENST00000411243 PRR23D1E9PI22 279 aaPredicted RBP3.33□□□□□ -1.88
RNU4-61P-201ENST00000411243 PRR23D2P0DMB1 279 aaPredicted RBP3.33□□□□□ -1.88
RNU4-61P-201ENST00000411243 BCL6P41182 706 aa3.33□□□□□ -1.88
RNU4-61P-201ENST00000411243 PFKPQ01813 784 aa3.33□□□□□ -1.88
RNU4-61P-201ENST00000411243 HGFACQ04756 655 aa3.33□□□□□ -1.88
RNU4-61P-201ENST00000411243 LARP4Q71RC2 724 aaKnown RBP eCLIP3.33□□□□□ -1.88
RNU4-61P-201ENST00000411243 SIMC1Q8NDZ2 872 aa3.33□□□□□ -1.88
RNU4-61P-201ENST00000411243 PPIL4Q8WUA2 492 aaKnown RBP eCLIP3.33□□□□□ -1.88
RNU4-61P-201ENST00000411243 PPP1R10Q96QC0 940 aaKnown RBP3.33□□□□□ -1.88
RNU4-61P-201ENST00000411243 ZDHHC5Q9C0B5 715 aa3.33□□□□□ -1.88
RNU4-61P-201ENST00000411243 ZNF839A8K0R7 811 aa3.32□□□□□ -1.88
RNU4-61P-201ENST00000411243 CTSHP09668 335 aa3.32□□□□□ -1.88
RNU4-61P-201ENST00000411243 ZFP36P26651 326 aaKnown RBP3.32□□□□□ -1.88
RNU4-61P-201ENST00000411243 ZNF165P49910 485 aa3.32□□□□□ -1.88
RNU4-61P-201ENST00000411243 SEZ6Q53EL9 994 aa3.32□□□□□ -1.88
RNU4-61P-201ENST00000411243 CYP4F22Q6NT55 531 aa3.32□□□□□ -1.88
RNU4-61P-201ENST00000411243 ZBTB8BQ8NAP8 495 aaPredicted RBP3.32□□□□□ -1.88
RNU4-61P-201ENST00000411243 SUPT20HQ8NEM7 779 aa3.32□□□□□ -1.88
RNU4-61P-201ENST00000411243 GPR87Q9BY21 358 aa3.32□□□□□ -1.88
RNU4-61P-201ENST00000411243 GBP3Q9H0R5 595 aa3.32□□□□□ -1.88
RNU4-61P-201ENST00000411243 FBXL7Q9UJT9 491 aa3.32□□□□□ -1.88
RNU4-61P-201ENST00000411243 ZNF214Q9UL59 606 aaPredicted RBP3.32□□□□□ -1.88
RNU4-61P-201ENST00000411243 XDHP47989 1333 aa3.32□□□□□ -1.88
RNU4-61P-201ENST00000411243 CGB1A6NKQ9 187 aa3.31□□□□□ -1.88
RNU4-61P-201ENST00000411243 H7BY64 318 aa3.31□□□□□ -1.88
RNU4-61P-201ENST00000411243 HMGCRP04035 888 aa3.31□□□□□ -1.88
RNU4-61P-201ENST00000411243 ENO2P09104 434 aaPredicted RBP3.31□□□□□ -1.88
RNU4-61P-201ENST00000411243 USP14P54578 494 aa3.31□□□□□ -1.88
RNU4-61P-201ENST00000411243 ZYXQ15942 572 aaKnown RBP3.31□□□□□ -1.88
RNU4-61P-201ENST00000411243 ERCC6LQ2NKX8 1250 aa3.31□□□□□ -1.88
RNU4-61P-201ENST00000411243 PLEKHG4Q58EX7 1191 aa3.31□□□□□ -1.88
RNU4-61P-201ENST00000411243 CD276Q5ZPR3 534 aa3.31□□□□□ -1.88
RNU4-61P-201ENST00000411243 TRIM48Q8IWZ4 208 aa3.31□□□□□ -1.88
RNU4-61P-201ENST00000411243 RCC1LQ96I51 464 aaKnown RBP3.31□□□□□ -1.88
RNU4-61P-201ENST00000411243 DUSP9Q99956 384 aaKnown RBP3.31□□□□□ -1.88
RNU4-61P-201ENST00000411243 OR10A2Q9H208 303 aa3.31□□□□□ -1.88
RNU4-61P-201ENST00000411243 LRP12Q9Y561 859 aa3.31□□□□□ -1.88
RNU4-61P-201ENST00000411243 ARHGEF17Q96PE2 2063 aaPredicted RBP3.31□□□□□ -1.88
RNU4-61P-201ENST00000411243 KLRG2A4D1S0 409 aaPredicted RBP3.3□□□□□ -1.88
RNU4-61P-201ENST00000411243 GRXCR1A8MXD5 290 aa3.3□□□□□ -1.88
RNU4-61P-201ENST00000411243 MAFKO60675 156 aa3.3□□□□□ -1.88
RNU4-61P-201ENST00000411243 FAHP16930 419 aa3.3□□□□□ -1.88
RNU4-61P-201ENST00000411243 RIN1Q13671 783 aa3.3□□□□□ -1.88
RNU4-61P-201ENST00000411243 HTR3DQ70Z44 454 aa3.3□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms