RNA–Protein interactions for RNA: ENST00000411146.1

RNU2-55P-201, Transcript of RNA, U2 small nuclear 55, pseudogene, humanhuman

BASIC

Gene RNU2-55P, Length 174 nt, Biotype snRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU2-55P-201ENST00000411146 FOXL1Q12952 345 aa2.61□□□□□ -1.99
RNU2-55P-201ENST00000411146 TOP3AQ13472 1001 aaPredicted RBP2.61□□□□□ -1.99
RNU2-55P-201ENST00000411146 PRKD1Q15139 912 aaPredicted RBP2.61□□□□□ -1.99
RNU2-55P-201ENST00000411146 FXNQ16595 210 aa2.61□□□□□ -1.99
RNU2-55P-201ENST00000411146 TM4SF20Q53R12 229 aa2.61□□□□□ -1.99
RNU2-55P-201ENST00000411146 FOXB2Q5VYV0 432 aa2.61□□□□□ -1.99
RNU2-55P-201ENST00000411146 LRSAM1Q6UWE0 723 aa2.61□□□□□ -1.99
RNU2-55P-201ENST00000411146 USP51Q70EK9 711 aa2.61□□□□□ -1.99
RNU2-55P-201ENST00000411146 ZNF627Q7L945 461 aa2.61□□□□□ -1.99
RNU2-55P-201ENST00000411146 PNPLA5Q7Z6Z6 429 aaPredicted RBP2.61□□□□□ -1.99
RNU2-55P-201ENST00000411146 OSTM1Q86WC4 334 aa2.61□□□□□ -1.99
RNU2-55P-201ENST00000411146 ZNF808Q8N4W9 903 aaPredicted RBP2.61□□□□□ -1.99
RNU2-55P-201ENST00000411146 TTLL11Q8NHH1 800 aa2.61□□□□□ -1.99
RNU2-55P-201ENST00000411146 KCTD13Q8WZ19 329 aa2.61□□□□□ -1.99
RNU2-55P-201ENST00000411146 CFHR4Q92496 578 aa2.61□□□□□ -1.99
RNU2-55P-201ENST00000411146 ZNF428Q96B54 188 aa2.61□□□□□ -1.99
RNU2-55P-201ENST00000411146 CHFRQ96EP1 664 aa2.61□□□□□ -1.99
RNU2-55P-201ENST00000411146 BCL11AQ9H165 835 aa2.61□□□□□ -1.99
RNU2-55P-201ENST00000411146 CCSER2Q9H7U1 834 aa2.61□□□□□ -1.99
RNU2-55P-201ENST00000411146 AGO3Q9H9G7 860 aaKnown RBP2.61□□□□□ -1.99
RNU2-55P-201ENST00000411146 STRIP2Q9ULQ0 834 aa2.61□□□□□ -1.99
RNU2-55P-201ENST00000411146 H0Y858 1186 aa2.6□□□□□ -1.99
RNU2-55P-201ENST00000411146 KRIT1O00522 736 aa2.6□□□□□ -1.99
RNU2-55P-201ENST00000411146 KLF4O43474 513 aa2.6□□□□□ -1.99
RNU2-55P-201ENST00000411146 CYP7B1O75881 506 aa2.6□□□□□ -1.99
RNU2-55P-201ENST00000411146 GNAT1P11488 350 aa2.6□□□□□ -1.99
RNU2-55P-201ENST00000411146 PABPC1P11940 636 aaKnown RBP2.6□□□□□ -1.99
RNU2-55P-201ENST00000411146 COMTP21964 271 aa2.6□□□□□ -1.99
RNU2-55P-201ENST00000411146 GJA4P35212 333 aa2.6□□□□□ -1.99
RNU2-55P-201ENST00000411146 JAM2P57087 298 aa2.6□□□□□ -1.99
RNU2-55P-201ENST00000411146 DBPQ10586 325 aaPredicted RBP2.6□□□□□ -1.99
RNU2-55P-201ENST00000411146 USP10Q14694 798 aaKnown RBP2.6□□□□□ -1.99
RNU2-55P-201ENST00000411146 LSM12Q3MHD2 195 aaKnown RBP2.6□□□□□ -1.99
RNU2-55P-201ENST00000411146 BTBD8Q5XKL5 378 aa2.6□□□□□ -1.99
RNU2-55P-201ENST00000411146 SPTY2D1Q68D10 685 aaPredicted RBP2.6□□□□□ -1.99
RNU2-55P-201ENST00000411146 MAMDC4Q6UXC1 1216 aa2.6□□□□□ -1.99
RNU2-55P-201ENST00000411146 ANKS3Q6ZW76 656 aa2.6□□□□□ -1.99
RNU2-55P-201ENST00000411146 KCTD1Q719H9 257 aa2.6□□□□□ -1.99
RNU2-55P-201ENST00000411146 TRIM48Q8IWZ4 208 aa2.6□□□□□ -1.99
RNU2-55P-201ENST00000411146 GPR135Q8IZ08 494 aa2.6□□□□□ -1.99
RNU2-55P-201ENST00000411146 OR14A2Q96R54 314 aa2.6□□□□□ -1.99
RNU2-55P-201ENST00000411146 PLA2G12BQ9BX93 195 aa2.6□□□□□ -1.99
RNU2-55P-201ENST00000411146 AMNQ9BXJ7 453 aa2.6□□□□□ -1.99
RNU2-55P-201ENST00000411146 PDGFDQ9GZP0 370 aaPredicted RBP2.6□□□□□ -1.99
RNU2-55P-201ENST00000411146 CSRNP2Q9H175 543 aa2.6□□□□□ -1.99
RNU2-55P-201ENST00000411146 SEMA4AQ9H3S1 761 aa2.6□□□□□ -1.99
RNU2-55P-201ENST00000411146 C11orf21Q9P2W6 132 aa2.6□□□□□ -1.99
RNU2-55P-201ENST00000411146 CBLCQ9ULV8 474 aa2.6□□□□□ -1.99
RNU2-55P-201ENST00000411146 PCDHA8Q9Y5H6 950 aa2.6□□□□□ -1.99
RNU2-55P-201ENST00000411146 PCSK5Q92824 1860 aa2.6□□□□□ -1.99
RNU2-55P-201ENST00000411146 MAN2B1O00754 1011 aa2.59□□□□□ -1.99
RNU2-55P-201ENST00000411146 CDC14BO60729 498 aa2.59□□□□□ -1.99
RNU2-55P-201ENST00000411146 RAD17O75943 681 aa2.59□□□□□ -1.99
RNU2-55P-201ENST00000411146 ZNF202O95125 648 aa2.59□□□□□ -1.99
RNU2-55P-201ENST00000411146 MPIG6BO95866 241 aa2.59□□□□□ -1.99
RNU2-55P-201ENST00000411146 SRGAP2CP0DJJ0 459 aa2.59□□□□□ -1.99
RNU2-55P-201ENST00000411146 PYGMP11217 842 aa2.59□□□□□ -1.99
RNU2-55P-201ENST00000411146 KRT4P19013 534 aa2.59□□□□□ -1.99
RNU2-55P-201ENST00000411146 CR2P20023 1033 aa2.59□□□□□ -1.99
RNU2-55P-201ENST00000411146 ERCC5P28715 1186 aaPredicted RBP2.59□□□□□ -1.99
RNU2-55P-201ENST00000411146 STAT3P40763 770 aa2.59□□□□□ -1.99
RNU2-55P-201ENST00000411146 KCNQ1P51787 676 aa2.59□□□□□ -1.99
RNU2-55P-201ENST00000411146 IL13RA1P78552 427 aa2.59□□□□□ -1.99
RNU2-55P-201ENST00000411146 RBM10P98175 930 aaKnown RBP2.59□□□□□ -1.99
RNU2-55P-201ENST00000411146 KRTAP15-1Q3LI76 137 aa2.59□□□□□ -1.99
RNU2-55P-201ENST00000411146 FAM209AQ5JX71 171 aa2.59□□□□□ -1.99
RNU2-55P-201ENST00000411146 CYP4F22Q6NT55 531 aa2.59□□□□□ -1.99
RNU2-55P-201ENST00000411146 NSMFQ6X4W1 530 aa2.59□□□□□ -1.99
RNU2-55P-201ENST00000411146 Q6ZPA2 131 aa2.59□□□□□ -1.99
RNU2-55P-201ENST00000411146 ARHGAP36Q6ZRI8 547 aa2.59□□□□□ -1.99
RNU2-55P-201ENST00000411146 SPATC1Q76KD6 591 aa2.59□□□□□ -1.99
RNU2-55P-201ENST00000411146 EEPD1Q7L9B9 569 aa2.59□□□□□ -1.99
RNU2-55P-201ENST00000411146 PTRH1Q86Y79 214 aaKnown RBP2.59□□□□□ -1.99
RNU2-55P-201ENST00000411146 C1orf210Q8IVY1 113 aa2.59□□□□□ -1.99
RNU2-55P-201ENST00000411146 PCDH19Q8TAB3 1148 aa2.59□□□□□ -1.99
RNU2-55P-201ENST00000411146 DCAF4Q8WV16 495 aa2.59□□□□□ -1.99
RNU2-55P-201ENST00000411146 LARP4BQ92615 738 aaKnown RBP2.59□□□□□ -1.99
RNU2-55P-201ENST00000411146 PLEKHG4BQ96PX9 1271 aa2.59□□□□□ -1.99
RNU2-55P-201ENST00000411146 BUD13Q9BRD0 619 aaKnown RBP eCLIP2.59□□□□□ -1.99
RNU2-55P-201ENST00000411146 TINF2Q9BSI4 451 aa2.59□□□□□ -1.99
RNU2-55P-201ENST00000411146 CARD11Q9BXL7 1154 aa2.59□□□□□ -1.99
RNU2-55P-201ENST00000411146 TRIM8Q9BZR9 551 aa2.59□□□□□ -1.99
RNU2-55P-201ENST00000411146 C12orf65Q9H3J6 166 aaKnown RBP2.59□□□□□ -1.99
RNU2-55P-201ENST00000411146 MMRN2Q9H8L6 949 aa2.59□□□□□ -1.99
RNU2-55P-201ENST00000411146 BTBD7Q9P203 1132 aa2.59□□□□□ -1.99
RNU2-55P-201ENST00000411146 MAGEL2Q9UJ55 1249 aa2.59□□□□□ -1.99
RNU2-55P-201ENST00000411146 OAZ3Q9UMX2 235 aa2.59□□□□□ -1.99
RNU2-55P-201ENST00000411146 C4BPAP04003 597 aaKnown RBP2.58□□□□□ -2
RNU2-55P-201ENST00000411146 PTPN1P18031 435 aaKnown RBP2.58□□□□□ -2
RNU2-55P-201ENST00000411146 KRT15P19012 456 aa2.58□□□□□ -2
RNU2-55P-201ENST00000411146 POLD1P28340 1107 aa2.58□□□□□ -2
RNU2-55P-201ENST00000411146 MSX2P35548 267 aaPredicted RBP2.58□□□□□ -2
RNU2-55P-201ENST00000411146 PTTG1IPP53801 180 aa2.58□□□□□ -2
RNU2-55P-201ENST00000411146 RAC3P60763 192 aa2.58□□□□□ -2
RNU2-55P-201ENST00000411146 GPR85P60893 370 aa2.58□□□□□ -2
RNU2-55P-201ENST00000411146 TGFB2P61812 414 aa2.58□□□□□ -2
RNU2-55P-201ENST00000411146 CD83Q01151 205 aa2.58□□□□□ -2
RNU2-55P-201ENST00000411146 PTH1RQ03431 593 aa2.58□□□□□ -2
RNU2-55P-201ENST00000411146 SPIRE1Q08AE8 756 aa2.58□□□□□ -2
RNU2-55P-201ENST00000411146 HSP90AA2PQ14568 343 aaPredicted RBP2.58□□□□□ -2
Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms